RNA–Protein interactions for RNA: ENST00000308580.11

TMOD3-201, Transcript of tropomodulin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMOD3, Length 8,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-201ENST00000308580 NCOA4Q13772 614 aa10.51□□□□□ -0.73
TMOD3-201ENST00000308580 TAF1BQ53T94 588 aaPredicted RBP10.51□□□□□ -0.73
TMOD3-201ENST00000308580 MKNK1Q9BUB5 465 aa10.51□□□□□ -0.73
TMOD3-201ENST00000308580 PLAGL2Q9UPG8 496 aa10.51□□□□□ -0.73
TMOD3-201ENST00000308580 AP5Z1O43299 807 aa10.51□□□□□ -0.73
TMOD3-201ENST00000308580 GJB7Q6PEY0 223 aa10.51□□□□□ -0.73
TMOD3-201ENST00000308580 TTC39CQ8N584 583 aa10.51□□□□□ -0.73
TMOD3-201ENST00000308580 AGAP1Q9UPQ3 857 aa10.51□□□□□ -0.73
TMOD3-201ENST00000308580 FAM205AQ6ZU69 1335 aa10.51□□□□□ -0.73
TMOD3-201ENST00000308580 C19orf81C9J6K1 198 aa10.51□□□□□ -0.73
TMOD3-201ENST00000308580 PEX19P40855 299 aa10.51□□□□□ -0.73
TMOD3-201ENST00000308580 EMC2Q15006 297 aa10.51□□□□□ -0.73
TMOD3-201ENST00000308580 C1orf228Q6PIY5 440 aa10.51□□□□□ -0.73
TMOD3-201ENST00000308580 ATP11CQ8NB49 1132 aa10.51□□□□□ -0.73
TMOD3-201ENST00000308580 RBBP8NLQ8NC74 664 aaPredicted RBP10.51□□□□□ -0.73
TMOD3-201ENST00000308580 RBM46Q8TBY0 533 aaKnown RBP10.51□□□□□ -0.73
TMOD3-201ENST00000308580 ANKRD7Q92527 254 aa10.51□□□□□ -0.73
TMOD3-201ENST00000308580 MAGEA9P43362 315 aa10.5□□□□□ -0.73
TMOD3-201ENST00000308580 ERVK-24P63145 666 aa10.5□□□□□ -0.73
TMOD3-201ENST00000308580 ROR1Q01973 937 aa10.5□□□□□ -0.73
TMOD3-201ENST00000308580 MKRN4PQ13434 485 aaPredicted RBP10.5□□□□□ -0.73
TMOD3-201ENST00000308580 ANKS1AQ92625 1134 aa10.5□□□□□ -0.73
TMOD3-201ENST00000308580 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.5□□□□□ -0.73
TMOD3-201ENST00000308580 C18orf8Q96DM3 657 aa10.5□□□□□ -0.73
TMOD3-201ENST00000308580 SLC1A1P43005 524 aa10.5□□□□□ -0.73
TMOD3-201ENST00000308580 RPS6P62753 249 aaKnown RBP10.5□□□□□ -0.73
TMOD3-201ENST00000308580 THEM5Q8N1Q8 247 aa10.5□□□□□ -0.73
TMOD3-201ENST00000308580 KIF9Q9HAQ2 790 aa10.5□□□□□ -0.73
TMOD3-201ENST00000308580 CHMP6Q96FZ7 201 aa10.5□□□□□ -0.73
TMOD3-201ENST00000308580 PIK3R2O00459 728 aa10.5□□□□□ -0.73
TMOD3-201ENST00000308580 EIF3DO15371 548 aaKnown RBP eCLIP10.5□□□□□ -0.73
TMOD3-201ENST00000308580 GYS1P13807 737 aa10.5□□□□□ -0.73
TMOD3-201ENST00000308580 EPC2Q52LR7 807 aa10.5□□□□□ -0.73
TMOD3-201ENST00000308580 HIPK4Q8NE63 616 aa10.5□□□□□ -0.73
TMOD3-201ENST00000308580 SDCCAG3Q96C92 435 aa10.5□□□□□ -0.73
TMOD3-201ENST00000308580 ADAM33Q9BZ11 813 aa10.5□□□□□ -0.73
TMOD3-201ENST00000308580 TMEM117Q9H0C3 514 aa10.5□□□□□ -0.73
TMOD3-201ENST00000308580 UBN1Q9NPG3 1134 aa10.5□□□□□ -0.73
TMOD3-201ENST00000308580 ATMINO43313 823 aaPredicted RBP10.5□□□□□ -0.73
TMOD3-201ENST00000308580 TAF11Q15544 211 aa10.5□□□□□ -0.73
TMOD3-201ENST00000308580 PKN1Q16512 942 aa10.5□□□□□ -0.73
TMOD3-201ENST00000308580 TRIM67Q6ZTA4 783 aa10.5□□□□□ -0.73
TMOD3-201ENST00000308580 PRMT6Q96LA8 375 aaPredicted RBP10.5□□□□□ -0.73
TMOD3-201ENST00000308580 TGS1Q96RS0 853 aaKnown RBP10.5□□□□□ -0.73
TMOD3-201ENST00000308580 KBTBD4Q9NVX7 518 aa10.5□□□□□ -0.73
TMOD3-201ENST00000308580 EPS15L1Q9UBC2 864 aa10.5□□□□□ -0.73
TMOD3-201ENST00000308580 CHORDC1Q9UHD1 332 aaPredicted RBP10.5□□□□□ -0.73
TMOD3-201ENST00000308580 H0Y3Z8 333 aa10.5□□□□□ -0.73
TMOD3-201ENST00000308580 MED24O75448 989 aa10.5□□□□□ -0.73
TMOD3-201ENST00000308580 NME3Q13232 169 aa10.5□□□□□ -0.73
TMOD3-201ENST00000308580 FASTKD5Q7L8L6 764 aaKnown RBP10.5□□□□□ -0.73
TMOD3-201ENST00000308580 ACAP3Q96P50 834 aa10.5□□□□□ -0.73
TMOD3-201ENST00000308580 TAAR1Q96RJ0 339 aa10.5□□□□□ -0.73
TMOD3-201ENST00000308580 POLR3CQ9BUI4 534 aaPredicted RBP10.5□□□□□ -0.73
TMOD3-201ENST00000308580 RUSC1Q9BVN2 902 aa10.5□□□□□ -0.73
TMOD3-201ENST00000308580 MOV10L1Q9BXT6 1211 aaKnown RBP10.5□□□□□ -0.73
TMOD3-201ENST00000308580 RTFDC1Q9BY42 306 aaPredicted RBP10.5□□□□□ -0.73
TMOD3-201ENST00000308580 GGA3Q9NZ52 723 aa10.5□□□□□ -0.73
TMOD3-201ENST00000308580 TCRBV5S4A2TA0A5A2 114 aa10.49□□□□□ -0.73
TMOD3-201ENST00000308580 RSPH10B2B2RC85 870 aa10.49□□□□□ -0.73
TMOD3-201ENST00000308580 RSPH10BP0C881 870 aa10.49□□□□□ -0.73
TMOD3-201ENST00000308580 ELF1P32519 619 aa10.49□□□□□ -0.73
TMOD3-201ENST00000308580 COPB2P35606 906 aa10.49□□□□□ -0.73
TMOD3-201ENST00000308580 TSPY1Q01534 308 aa10.49□□□□□ -0.73
TMOD3-201ENST00000308580 ART3Q13508 389 aa10.49□□□□□ -0.73
TMOD3-201ENST00000308580 C3orf67Q6ZVT6 689 aa10.49□□□□□ -0.73
TMOD3-201ENST00000308580 SAMD7Q7Z3H4 446 aa10.49□□□□□ -0.73
TMOD3-201ENST00000308580 FBXO41Q8TF61 875 aa10.49□□□□□ -0.73
TMOD3-201ENST00000308580 HVCN1Q96D96 273 aa10.49□□□□□ -0.73
TMOD3-201ENST00000308580 DEFB129Q9H1M3 183 aa10.49□□□□□ -0.73
TMOD3-201ENST00000308580 PPP1R9AQ9ULJ8 1098 aa10.49□□□□□ -0.73
TMOD3-201ENST00000308580 SNX9Q9Y5X1 595 aa10.49□□□□□ -0.73
TMOD3-201ENST00000308580 ALG6Q9Y672 507 aa10.49□□□□□ -0.73
TMOD3-201ENST00000308580 SPAG7O75391 227 aa10.49□□□□□ -0.73
TMOD3-201ENST00000308580 PPP1R37O75864 691 aa10.49□□□□□ -0.73
TMOD3-201ENST00000308580 HLA-DRAP01903 254 aa10.49□□□□□ -0.73
TMOD3-201ENST00000308580 KCNV1Q6PIU1 500 aa10.49□□□□□ -0.73
TMOD3-201ENST00000308580 DDX42Q86XP3 938 aaKnown RBP eCLIP10.49□□□□□ -0.73
TMOD3-201ENST00000308580 TEX2Q8IWB9 1127 aa10.49□□□□□ -0.73
TMOD3-201ENST00000308580 SPDL1Q96EA4 605 aa10.49□□□□□ -0.73
TMOD3-201ENST00000308580 BFARQ9NZS9 450 aa10.49□□□□□ -0.73
TMOD3-201ENST00000308580 RAD51CO43502 376 aa10.49□□□□□ -0.73
TMOD3-201ENST00000308580 TMEM253P0C7T8 217 aa10.49□□□□□ -0.73
TMOD3-201ENST00000308580 CARSP49589 748 aaKnown RBP10.49□□□□□ -0.73
TMOD3-201ENST00000308580 EFHC2Q5JST6 749 aa10.49□□□□□ -0.73
TMOD3-201ENST00000308580 DHX38Q92620 1227 aaKnown RBP10.49□□□□□ -0.73
TMOD3-201ENST00000308580 C9orf72Q96LT7 481 aa10.49□□□□□ -0.73
TMOD3-201ENST00000308580 VIPAS39Q9H9C1 493 aa10.49□□□□□ -0.73
TMOD3-201ENST00000308580 EHD2Q9NZN4 543 aa10.49□□□□□ -0.73
TMOD3-201ENST00000308580 COMTP21964 271 aa10.49□□□□□ -0.73
TMOD3-201ENST00000308580 SATB1Q01826 763 aa10.49□□□□□ -0.73
TMOD3-201ENST00000308580 TTC1Q99614 292 aa10.49□□□□□ -0.73
TMOD3-201ENST00000308580 SIK2Q9H0K1 926 aa10.49□□□□□ -0.73
TMOD3-201ENST00000308580 ZBTB24O43167 697 aaPredicted RBP10.49□□□□□ -0.73
TMOD3-201ENST00000308580 GMPSP49915 693 aaPredicted RBP10.49□□□□□ -0.73
TMOD3-201ENST00000308580 TAP1Q03518 808 aa10.49□□□□□ -0.73
TMOD3-201ENST00000308580 TTI2Q6NXR4 508 aa10.49□□□□□ -0.73
TMOD3-201ENST00000308580 KLC3Q6P597 504 aa10.49□□□□□ -0.73
TMOD3-201ENST00000308580 PDZD8Q8NEN9 1154 aa10.49□□□□□ -0.73
TMOD3-201ENST00000308580 OR2W6PQ8NHA6 318 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms