RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 METTL13Q8N6R0 699 aa11.1□□□□□ -0.63
APOBEC3F-201ENST00000308521 TPCN2Q8NHX9 752 aa11.1□□□□□ -0.63
APOBEC3F-201ENST00000308521 NACC1Q96RE7 527 aa11.1□□□□□ -0.63
APOBEC3F-201ENST00000308521 KDM4CQ9H3R0 1056 aa11.1□□□□□ -0.63
APOBEC3F-201ENST00000308521 NMRK2Q9NPI5 230 aa11.1□□□□□ -0.63
APOBEC3F-201ENST00000308521 TTC7AQ9ULT0 858 aaPredicted RBP11.1□□□□□ -0.63
APOBEC3F-201ENST00000308521 KCNH4Q9UQ05 1017 aa11.1□□□□□ -0.63
APOBEC3F-201ENST00000308521 NOC2LQ9Y3T9 749 aaKnown RBP11.1□□□□□ -0.63
APOBEC3F-201ENST00000308521 FRMPD4Q14CM0 1322 aa11.1□□□□□ -0.63
APOBEC3F-201ENST00000308521 DNAH12Q6ZR08 3092 aa11.1□□□□□ -0.63
APOBEC3F-201ENST00000308521 DNM1LO00429 736 aa11.1□□□□□ -0.63
APOBEC3F-201ENST00000308521 PPFIA2O75334 1257 aa11.1□□□□□ -0.63
APOBEC3F-201ENST00000308521 TBCAO75347 108 aaKnown RBP11.1□□□□□ -0.63
APOBEC3F-201ENST00000308521 CELF2O95319 508 aaKnown RBP11.1□□□□□ -0.63
APOBEC3F-201ENST00000308521 GCNT3O95395 438 aa11.1□□□□□ -0.63
APOBEC3F-201ENST00000308521 RAB27AP51159 221 aa11.1□□□□□ -0.63
APOBEC3F-201ENST00000308521 PTK2Q05397 1052 aa11.1□□□□□ -0.63
APOBEC3F-201ENST00000308521 PLA2G4FQ68DD2 849 aa11.1□□□□□ -0.63
APOBEC3F-201ENST00000308521 ZNF571Q7Z3V5 609 aaPredicted RBP11.1□□□□□ -0.63
APOBEC3F-201ENST00000308521 TMC3Q7Z5M5 1100 aa11.1□□□□□ -0.63
APOBEC3F-201ENST00000308521 SYCE1Q8N0S2 351 aa11.1□□□□□ -0.63
APOBEC3F-201ENST00000308521 OR2W6PQ8NHA6 318 aa11.1□□□□□ -0.63
APOBEC3F-201ENST00000308521 TLCD1Q96CP7 247 aa11.1□□□□□ -0.63
APOBEC3F-201ENST00000308521 CENPHQ9H3R5 247 aa11.1□□□□□ -0.63
APOBEC3F-201ENST00000308521 TBC1D22BQ9NU19 505 aa11.1□□□□□ -0.63
APOBEC3F-201ENST00000308521 CNOT8Q9UFF9 292 aaKnown RBP11.1□□□□□ -0.63
APOBEC3F-201ENST00000308521 NAGPAQ9UK23 515 aa11.1□□□□□ -0.63
APOBEC3F-201ENST00000308521 PNMA2Q9UL42 364 aa11.1□□□□□ -0.63
APOBEC3F-201ENST00000308521 CETN3O15182 167 aa11.09□□□□□ -0.63
APOBEC3F-201ENST00000308521 DNAJC8O75937 253 aaPredicted RBP11.09□□□□□ -0.63
APOBEC3F-201ENST00000308521 P4HBP07237 508 aaKnown RBP11.09□□□□□ -0.63
APOBEC3F-201ENST00000308521 KCNH2Q12809 1159 aa11.09□□□□□ -0.63
APOBEC3F-201ENST00000308521 QPCTQ16769 361 aa11.09□□□□□ -0.63
APOBEC3F-201ENST00000308521 CCDC38Q502W7 563 aa11.09□□□□□ -0.63
APOBEC3F-201ENST00000308521 ODF2Q5BJF6 829 aa11.09□□□□□ -0.63
APOBEC3F-201ENST00000308521 CYB5D1Q6P9G0 228 aa11.09□□□□□ -0.63
APOBEC3F-201ENST00000308521 DDX42Q86XP3 938 aaKnown RBP eCLIP11.09□□□□□ -0.63
APOBEC3F-201ENST00000308521 RIOX2Q8IUF8 465 aa11.09□□□□□ -0.63
APOBEC3F-201ENST00000308521 UBLCP1Q8WVY7 318 aaPredicted RBP11.09□□□□□ -0.63
APOBEC3F-201ENST00000308521 SUDS3Q9H7L9 328 aaPredicted RBP11.09□□□□□ -0.63
APOBEC3F-201ENST00000308521 KIF9Q9HAQ2 790 aa11.09□□□□□ -0.63
APOBEC3F-201ENST00000308521 CHCHD3Q9NX63 227 aaKnown RBP11.09□□□□□ -0.63
APOBEC3F-201ENST00000308521 CORO1CQ9ULV4 474 aaPredicted RBP11.09□□□□□ -0.63
APOBEC3F-201ENST00000308521 NOVA2Q9UNW9 492 aaKnown RBP11.09□□□□□ -0.63
APOBEC3F-201ENST00000308521 MYPNQ86TC9 1320 aa11.09□□□□□ -0.63
APOBEC3F-201ENST00000308521 DOCK5Q9H7D0 1870 aa11.09□□□□□ -0.63
APOBEC3F-201ENST00000308521 FRMD3A2A2Y4 597 aa11.09□□□□□ -0.63
APOBEC3F-201ENST00000308521 ARHGEF35A5YM69 484 aa11.09□□□□□ -0.63
APOBEC3F-201ENST00000308521 SOWAHBA6NEL2 793 aa11.09□□□□□ -0.63
APOBEC3F-201ENST00000308521 F8VZ95 297 aa11.09□□□□□ -0.63
APOBEC3F-201ENST00000308521 KRIT1O00522 736 aa11.09□□□□□ -0.63
APOBEC3F-201ENST00000308521 FAM13AO94988 1023 aa11.09□□□□□ -0.63
APOBEC3F-201ENST00000308521 DRD4P21917 467 aa11.09□□□□□ -0.63
APOBEC3F-201ENST00000308521 TMOD1P28289 359 aa11.09□□□□□ -0.63
APOBEC3F-201ENST00000308521 HOXD13P35453 343 aa11.09□□□□□ -0.63
APOBEC3F-201ENST00000308521 SCTRP47872 440 aa11.09□□□□□ -0.63
APOBEC3F-201ENST00000308521 QARSP47897 775 aaKnown RBP11.09□□□□□ -0.63
APOBEC3F-201ENST00000308521 SOX10P56693 466 aa11.09□□□□□ -0.63
APOBEC3F-201ENST00000308521 ARID5AQ03989 594 aa11.09□□□□□ -0.63
APOBEC3F-201ENST00000308521 SETDB1Q15047 1291 aa11.09□□□□□ -0.63
APOBEC3F-201ENST00000308521 GKAP1Q5VSY0 366 aaPredicted RBP11.09□□□□□ -0.63
APOBEC3F-201ENST00000308521 ALKBH5Q6P6C2 394 aaKnown RBP11.09□□□□□ -0.63
APOBEC3F-201ENST00000308521 CYFIP1Q7L576 1253 aa11.09□□□□□ -0.63
APOBEC3F-201ENST00000308521 NIPA1Q7RTP0 329 aa11.09□□□□□ -0.63
APOBEC3F-201ENST00000308521 FRMD5Q7Z6J6 570 aa11.09□□□□□ -0.63
APOBEC3F-201ENST00000308521 SDCCAG8Q86SQ7 713 aaPredicted RBP11.09□□□□□ -0.63
APOBEC3F-201ENST00000308521 CHST13Q8NET6 341 aa11.09□□□□□ -0.63
APOBEC3F-201ENST00000308521 SPDL1Q96EA4 605 aa11.09□□□□□ -0.63
APOBEC3F-201ENST00000308521 TXLNGYQ9BZA5 131 aa11.09□□□□□ -0.63
APOBEC3F-201ENST00000308521 PORCNQ9H237 461 aa11.09□□□□□ -0.63
APOBEC3F-201ENST00000308521 GPRC5CQ9NQ84 441 aa11.09□□□□□ -0.63
APOBEC3F-201ENST00000308521 DIS3Q9Y2L1 958 aaKnown RBP11.09□□□□□ -0.63
APOBEC3F-201ENST00000308521 KIAA1217Q5T5P2 1943 aa11.08□□□□□ -0.64
APOBEC3F-201ENST00000308521 CLIC2O15247 247 aa11.08□□□□□ -0.64
APOBEC3F-201ENST00000308521 CAND2O75155 1236 aa11.08□□□□□ -0.64
APOBEC3F-201ENST00000308521 RTN3O95197 1032 aaPredicted RBP11.08□□□□□ -0.64
APOBEC3F-201ENST00000308521 KCNA2P16389 499 aa11.08□□□□□ -0.64
APOBEC3F-201ENST00000308521 ADAM9Q13443 819 aa11.08□□□□□ -0.64
APOBEC3F-201ENST00000308521 SNAPC2Q13487 334 aa11.08□□□□□ -0.64
APOBEC3F-201ENST00000308521 PPP2R5EQ16537 467 aa11.08□□□□□ -0.64
APOBEC3F-201ENST00000308521 SWSAP1Q6NVH7 229 aa11.08□□□□□ -0.64
APOBEC3F-201ENST00000308521 PADI6Q6TGC4 694 aa11.08□□□□□ -0.64
APOBEC3F-201ENST00000308521 CEP57Q86XR8 500 aa11.08□□□□□ -0.64
APOBEC3F-201ENST00000308521 CCT6BQ92526 530 aa11.08□□□□□ -0.64
APOBEC3F-201ENST00000308521 AP1M1Q9BXS5 423 aa11.08□□□□□ -0.64
APOBEC3F-201ENST00000308521 EBF2Q9HAK2 575 aa11.08□□□□□ -0.64
APOBEC3F-201ENST00000308521 STK24Q9Y6E0 443 aa11.08□□□□□ -0.64
APOBEC3F-201ENST00000308521 DAPK3O43293 454 aa11.08□□□□□ -0.64
APOBEC3F-201ENST00000308521 GFPT2O94808 682 aa11.08□□□□□ -0.64
APOBEC3F-201ENST00000308521 YWHABP31946 246 aaKnown RBP11.08□□□□□ -0.64
APOBEC3F-201ENST00000308521 FLT3P36888 993 aa11.08□□□□□ -0.64
APOBEC3F-201ENST00000308521 ALDH5A1P51649 535 aaPredicted RBP11.08□□□□□ -0.64
APOBEC3F-201ENST00000308521 MAGOHP61326 146 aaKnown RBP11.08□□□□□ -0.64
APOBEC3F-201ENST00000308521 POU5F1Q01860 360 aaKnown RBP11.08□□□□□ -0.64
APOBEC3F-201ENST00000308521 STXBP2Q15833 593 aa11.08□□□□□ -0.64
APOBEC3F-201ENST00000308521 ERMARDQ5T6L9 678 aa11.08□□□□□ -0.64
APOBEC3F-201ENST00000308521 FASTKD5Q7L8L6 764 aaKnown RBP11.08□□□□□ -0.64
APOBEC3F-201ENST00000308521 PEX26Q7Z412 305 aa11.08□□□□□ -0.64
APOBEC3F-201ENST00000308521 SAMD3Q8N6K7 520 aa11.08□□□□□ -0.64
APOBEC3F-201ENST00000308521 MAGOHBQ96A72 148 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms