RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 C10orf76Q5T2E6 689 aa12.86□□□□□ -0.35
TRIM40-205ENST00000307859 EFCAB12Q6NXP0 572 aa12.86□□□□□ -0.35
TRIM40-205ENST00000307859 UBE2Q1Q7Z7E8 422 aa12.86□□□□□ -0.35
TRIM40-205ENST00000307859 ARHGEF19Q8IW93 802 aa12.86□□□□□ -0.35
TRIM40-205ENST00000307859 RNF149Q8NC42 400 aa12.86□□□□□ -0.35
TRIM40-205ENST00000307859 OR6J1Q8NGC5 347 aa12.86□□□□□ -0.35
TRIM40-205ENST00000307859 OLIG1Q8TAK6 271 aa12.86□□□□□ -0.35
TRIM40-205ENST00000307859 SEMA4DQ92854 862 aa12.86□□□□□ -0.35
TRIM40-205ENST00000307859 SECISBP2LQ93073 1101 aaKnown RBP12.86□□□□□ -0.35
TRIM40-205ENST00000307859 ZBTB45Q96K62 511 aaPredicted RBP12.86□□□□□ -0.35
TRIM40-205ENST00000307859 SYT11Q9BT88 431 aa12.86□□□□□ -0.35
TRIM40-205ENST00000307859 MSTO1Q9BUK6 570 aa12.86□□□□□ -0.35
TRIM40-205ENST00000307859 MRPL4Q9BYD3 311 aaKnown RBP12.86□□□□□ -0.35
TRIM40-205ENST00000307859 NFKBIZQ9BYH8 718 aa12.86□□□□□ -0.35
TRIM40-205ENST00000307859 TOPORSQ9NS56 1045 aaPredicted RBP12.86□□□□□ -0.35
TRIM40-205ENST00000307859 ZHX1Q9UKY1 873 aaPredicted RBP12.86□□□□□ -0.35
TRIM40-205ENST00000307859 DUSP10Q9Y6W6 482 aa12.86□□□□□ -0.35
TRIM40-205ENST00000307859 RALGAPA2Q2PPJ7 1873 aa12.85□□□□□ -0.35
TRIM40-205ENST00000307859 ADCY6O43306 1168 aa12.85□□□□□ -0.35
TRIM40-205ENST00000307859 LRRN2O75325 713 aa12.85□□□□□ -0.35
TRIM40-205ENST00000307859 IGHA2P01877 340 aa12.85□□□□□ -0.35
TRIM40-205ENST00000307859 PRKCBP05771 671 aa12.85□□□□□ -0.35
TRIM40-205ENST00000307859 CCDC172P0C7W6 258 aa12.85□□□□□ -0.35
TRIM40-205ENST00000307859 ZNF286BP0CG31 522 aa12.85□□□□□ -0.35
TRIM40-205ENST00000307859 PNMA6AP0CW24 399 aaPredicted RBP12.85□□□□□ -0.35
TRIM40-205ENST00000307859 CLCN3P51790 818 aa12.85□□□□□ -0.35
TRIM40-205ENST00000307859 PRMT2P55345 433 aa12.85□□□□□ -0.35
TRIM40-205ENST00000307859 AMPD2Q01433 879 aa12.85□□□□□ -0.35
TRIM40-205ENST00000307859 POU5F1BQ06416 359 aa12.85□□□□□ -0.35
TRIM40-205ENST00000307859 BMS1Q14692 1282 aaKnown RBP12.85□□□□□ -0.35
TRIM40-205ENST00000307859 KIF22Q14807 665 aa12.85□□□□□ -0.35
TRIM40-205ENST00000307859 ENOX2Q16206 610 aaKnown RBP12.85□□□□□ -0.35
TRIM40-205ENST00000307859 MAPK6Q16659 721 aa12.85□□□□□ -0.35
TRIM40-205ENST00000307859 SV2AQ7L0J3 742 aa12.85□□□□□ -0.35
TRIM40-205ENST00000307859 IFNLR1Q8IU57 520 aaPredicted RBP12.85□□□□□ -0.35
TRIM40-205ENST00000307859 FBXL13Q8NEE6 735 aa12.85□□□□□ -0.35
TRIM40-205ENST00000307859 TSC1Q92574 1164 aa12.85□□□□□ -0.35
TRIM40-205ENST00000307859 LRCH3Q96II8 777 aa12.85□□□□□ -0.35
TRIM40-205ENST00000307859 POP1Q99575 1024 aaKnown RBP12.85□□□□□ -0.35
TRIM40-205ENST00000307859 ADAMTS1Q9UHI8 967 aa12.85□□□□□ -0.35
TRIM40-205ENST00000307859 CDC23Q9UJX2 597 aa12.85□□□□□ -0.35
TRIM40-205ENST00000307859 TRIP11Q15643 1979 aa12.85□□□□□ -0.35
TRIM40-205ENST00000307859 ANO9A1A5B4 782 aa12.84□□□□□ -0.35
TRIM40-205ENST00000307859 MACROD2A1Z1Q3 448 aa12.84□□□□□ -0.35
TRIM40-205ENST00000307859 TTLL13PA6NNM8 815 aa12.84□□□□□ -0.35
TRIM40-205ENST00000307859 BTNL10A8MVZ5 291 aa12.84□□□□□ -0.35
TRIM40-205ENST00000307859 H3BRB1 525 aa12.84□□□□□ -0.35
TRIM40-205ENST00000307859 ABLIM1O14639 778 aa12.84□□□□□ -0.35
TRIM40-205ENST00000307859 FAM189A1O60320 539 aa12.84□□□□□ -0.35
TRIM40-205ENST00000307859 TOM1L1O75674 476 aa12.84□□□□□ -0.35
TRIM40-205ENST00000307859 GNRH1P01148 92 aa12.84□□□□□ -0.35
TRIM40-205ENST00000307859 SRGAP2CP0DJJ0 459 aa12.84□□□□□ -0.35
TRIM40-205ENST00000307859 KLRC1P26715 233 aa12.84□□□□□ -0.35
TRIM40-205ENST00000307859 PTENP60484 403 aa12.84□□□□□ -0.35
TRIM40-205ENST00000307859 TNFAIP2Q03169 654 aa12.84□□□□□ -0.35
TRIM40-205ENST00000307859 NCBP1Q09161 790 aaKnown RBP12.84□□□□□ -0.35
TRIM40-205ENST00000307859 NAB2Q15742 525 aa12.84□□□□□ -0.35
TRIM40-205ENST00000307859 OLFML2BQ68BL8 750 aa12.84□□□□□ -0.35
TRIM40-205ENST00000307859 VPS36Q86VN1 386 aa12.84□□□□□ -0.35
TRIM40-205ENST00000307859 RHPN2Q8IUC4 686 aa12.84□□□□□ -0.35
TRIM40-205ENST00000307859 RNF10Q8N5U6 811 aaKnown RBP12.84□□□□□ -0.35
TRIM40-205ENST00000307859 LRRN4CLQ8ND94 238 aa12.84□□□□□ -0.35
TRIM40-205ENST00000307859 TRIM58Q8NG06 486 aa12.84□□□□□ -0.35
TRIM40-205ENST00000307859 SLC30A5Q8TAD4 765 aa12.84□□□□□ -0.35
TRIM40-205ENST00000307859 SOCS4Q8WXH5 440 aa12.84□□□□□ -0.35
TRIM40-205ENST00000307859 ZNF516Q92618 1163 aa12.84□□□□□ -0.35
TRIM40-205ENST00000307859 ACO2Q99798 780 aaKnown RBP12.84□□□□□ -0.35
TRIM40-205ENST00000307859 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.84□□□□□ -0.35
TRIM40-205ENST00000307859 FZD8Q9H461 694 aa12.84□□□□□ -0.35
TRIM40-205ENST00000307859 TUT1Q9H6E5 874 aaKnown RBP12.84□□□□□ -0.35
TRIM40-205ENST00000307859 ZFYVE28Q9HCC9 887 aa12.84□□□□□ -0.35
TRIM40-205ENST00000307859 UBE2TQ9NPD8 197 aaPredicted RBP12.84□□□□□ -0.35
TRIM40-205ENST00000307859 RAB20Q9NX57 234 aa12.84□□□□□ -0.35
TRIM40-205ENST00000307859 FLRT1Q9NZU1 646 aa12.84□□□□□ -0.35
TRIM40-205ENST00000307859 ANKFY1Q9P2R3 1169 aa12.84□□□□□ -0.35
TRIM40-205ENST00000307859 NAGPAQ9UK23 515 aa12.84□□□□□ -0.35
TRIM40-205ENST00000307859 GNEQ9Y223 722 aaKnown RBP12.84□□□□□ -0.35
TRIM40-205ENST00000307859 CAPN6Q9Y6Q1 641 aa12.84□□□□□ -0.35
TRIM40-205ENST00000307859 DDX3XO00571 662 aaKnown RBP eCLIP12.84□□□□□ -0.35
TRIM40-205ENST00000307859 ACKR2O00590 384 aa12.84□□□□□ -0.35
TRIM40-205ENST00000307859 CLDN3O15551 220 aa12.84□□□□□ -0.35
TRIM40-205ENST00000307859 ZC3H11AO75152 810 aaKnown RBP eCLIP12.84□□□□□ -0.35
TRIM40-205ENST00000307859 GJB1P08034 283 aa12.84□□□□□ -0.35
TRIM40-205ENST00000307859 ZNF865P0CJ78 1059 aaPredicted RBP12.84□□□□□ -0.35
TRIM40-205ENST00000307859 DLATP10515 647 aaKnown RBP12.84□□□□□ -0.35
TRIM40-205ENST00000307859 PROZP22891 400 aa12.84□□□□□ -0.35
TRIM40-205ENST00000307859 ACOT2P49753 483 aa12.84□□□□□ -0.35
TRIM40-205ENST00000307859 WNT7BP56706 349 aa12.84□□□□□ -0.35
TRIM40-205ENST00000307859 DGKDQ16760 1214 aa12.84□□□□□ -0.35
TRIM40-205ENST00000307859 ARHGAP44Q17R89 818 aa12.84□□□□□ -0.35
TRIM40-205ENST00000307859 ZACNQ401N2 412 aa12.84□□□□□ -0.35
TRIM40-205ENST00000307859 ZBTB41Q5SVQ8 909 aa12.84□□□□□ -0.35
TRIM40-205ENST00000307859 PAPD7Q5XG87 772 aaKnown RBP12.84□□□□□ -0.35
TRIM40-205ENST00000307859 METTL13Q8N6R0 699 aa12.84□□□□□ -0.35
TRIM40-205ENST00000307859 HELQQ8TDG4 1101 aa12.84□□□□□ -0.35
TRIM40-205ENST00000307859 TAS1R2Q8TE23 839 aa12.84□□□□□ -0.35
TRIM40-205ENST00000307859 ANKRD7Q92527 254 aa12.84□□□□□ -0.35
TRIM40-205ENST00000307859 ZBTB10Q96DT7 871 aa12.84□□□□□ -0.35
TRIM40-205ENST00000307859 KREMEN1Q96MU8 473 aa12.84□□□□□ -0.35
TRIM40-205ENST00000307859 CARD6Q9BX69 1037 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms