RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 SESTD1Q86VW0 696 aa19.01■□□□□ 0.63
KRT28-201ENST00000306658 C17orf53Q8N3J3 647 aaPredicted RBP19.01■□□□□ 0.63
KRT28-201ENST00000306658 POP1Q99575 1024 aaKnown RBP19.01■□□□□ 0.63
KRT28-201ENST00000306658 SIX2Q9NPC8 291 aa19.01■□□□□ 0.63
KRT28-201ENST00000306658 SPTLC3Q9NUV7 552 aa19.01■□□□□ 0.63
KRT28-201ENST00000306658 MYO6Q9UM54 1294 aa19.01■□□□□ 0.63
KRT28-201ENST00000306658 PTCH2Q9Y6C5 1203 aa19.01■□□□□ 0.63
KRT28-201ENST00000306658 FAM189A1O60320 539 aa19■□□□□ 0.63
KRT28-201ENST00000306658 MCF2P10911 925 aa19■□□□□ 0.63
KRT28-201ENST00000306658 ARF4P18085 180 aaPredicted RBP19■□□□□ 0.63
KRT28-201ENST00000306658 TNNI1P19237 187 aa19■□□□□ 0.63
KRT28-201ENST00000306658 RFX1P22670 979 aa19■□□□□ 0.63
KRT28-201ENST00000306658 APBA1Q02410 837 aa19■□□□□ 0.63
KRT28-201ENST00000306658 SURF1Q15526 300 aa19■□□□□ 0.63
KRT28-201ENST00000306658 KYAT1Q16773 422 aa19■□□□□ 0.63
KRT28-201ENST00000306658 EPC2Q52LR7 807 aa19■□□□□ 0.63
KRT28-201ENST00000306658 E4F1Q66K89 784 aaPredicted RBP19■□□□□ 0.63
KRT28-201ENST00000306658 RSPH3Q86UC2 560 aa19■□□□□ 0.63
KRT28-201ENST00000306658 BRSK2Q8IWQ3 736 aa19■□□□□ 0.63
KRT28-201ENST00000306658 SPAG5Q96R06 1193 aa19■□□□□ 0.63
KRT28-201ENST00000306658 PDE11AQ9HCR9 933 aa19■□□□□ 0.63
KRT28-201ENST00000306658 RRAGDQ9NQL2 400 aaPredicted RBP19■□□□□ 0.63
KRT28-201ENST00000306658 COQ4Q9Y3A0 265 aa19■□□□□ 0.63
KRT28-201ENST00000306658 ZSCAN12O43309 604 aa18.99■□□□□ 0.63
KRT28-201ENST00000306658 TSPAN1O60635 241 aa18.99■□□□□ 0.63
KRT28-201ENST00000306658 DARSP14868 501 aaKnown RBP18.99■□□□□ 0.63
KRT28-201ENST00000306658 EIF4BP23588 611 aaKnown RBP18.99■□□□□ 0.63
KRT28-201ENST00000306658 ZBTB41Q5SVQ8 909 aa18.99■□□□□ 0.63
KRT28-201ENST00000306658 SFMBT2Q5VUG0 894 aa18.99■□□□□ 0.63
KRT28-201ENST00000306658 EEF1DP3Q658K8 133 aa18.99■□□□□ 0.63
KRT28-201ENST00000306658 SV2AQ7L0J3 742 aa18.99■□□□□ 0.63
KRT28-201ENST00000306658 APBB1IPQ7Z5R6 666 aaPredicted RBP18.99■□□□□ 0.63
KRT28-201ENST00000306658 CCAR2Q8N163 923 aaKnown RBP18.99■□□□□ 0.63
KRT28-201ENST00000306658 LMO3Q8TAP4 145 aa18.99■□□□□ 0.63
KRT28-201ENST00000306658 VTI1AQ96AJ9 217 aa18.99■□□□□ 0.63
KRT28-201ENST00000306658 OSMRQ99650 979 aa18.99■□□□□ 0.63
KRT28-201ENST00000306658 ADPGKQ9BRR6 497 aa18.99■□□□□ 0.63
KRT28-201ENST00000306658 TSEN34Q9BSV6 310 aaKnown RBP18.99■□□□□ 0.63
KRT28-201ENST00000306658 CDT1Q9H211 546 aa18.99■□□□□ 0.63
KRT28-201ENST00000306658 APEX2Q9UBZ4 518 aa18.99■□□□□ 0.63
KRT28-201ENST00000306658 CPSF3Q9UKF6 684 aaKnown RBP18.99■□□□□ 0.63
KRT28-201ENST00000306658 A0A1B0GUA9 196 aa18.98■□□□□ 0.63
KRT28-201ENST00000306658 MOXD2PA6NHM9 499 aa18.98■□□□□ 0.63
KRT28-201ENST00000306658 ACLYP53396 1101 aa18.98■□□□□ 0.63
KRT28-201ENST00000306658 CRYBB1P53674 252 aaPredicted RBP18.98■□□□□ 0.63
KRT28-201ENST00000306658 AP3M2P53677 418 aa18.98■□□□□ 0.63
KRT28-201ENST00000306658 SEZ6Q53EL9 994 aa18.98■□□□□ 0.63
KRT28-201ENST00000306658 GDF6Q6KF10 455 aaPredicted RBP18.98■□□□□ 0.63
KRT28-201ENST00000306658 RAD9BQ6WBX8 426 aa18.98■□□□□ 0.63
KRT28-201ENST00000306658 CATSPER4Q7RTX7 472 aa18.98■□□□□ 0.63
KRT28-201ENST00000306658 THNSL1Q8IYQ7 743 aa18.98■□□□□ 0.63
KRT28-201ENST00000306658 FBXL13Q8NEE6 735 aa18.98■□□□□ 0.63
KRT28-201ENST00000306658 CHP1Q99653 195 aa18.98■□□□□ 0.63
KRT28-201ENST00000306658 PDZD7Q9H5P4 517 aa18.98■□□□□ 0.63
KRT28-201ENST00000306658 CDHR5Q9HBB8 845 aa18.98■□□□□ 0.63
KRT28-201ENST00000306658 FHOD1Q9Y613 1164 aa18.98■□□□□ 0.63
KRT28-201ENST00000306658 M0QZ92 97 aa18.98■□□□□ 0.63
KRT28-201ENST00000306658 TNFSF9P41273 254 aa18.98■□□□□ 0.63
KRT28-201ENST00000306658 POU5F1Q01860 360 aaKnown RBP18.98■□□□□ 0.63
KRT28-201ENST00000306658 LHX8Q68G74 356 aa18.98■□□□□ 0.63
KRT28-201ENST00000306658 CDR2LQ86X02 465 aaPredicted RBP18.98■□□□□ 0.63
KRT28-201ENST00000306658 FMNL3Q8IVF7 1028 aa18.98■□□□□ 0.63
KRT28-201ENST00000306658 CCDC170Q8IYT3 715 aa18.98■□□□□ 0.63
KRT28-201ENST00000306658 ARRDC4Q8NCT1 418 aa18.98■□□□□ 0.63
KRT28-201ENST00000306658 CPB2Q96IY4 423 aa18.98■□□□□ 0.63
KRT28-201ENST00000306658 CGRRF1Q99675 332 aa18.98■□□□□ 0.63
KRT28-201ENST00000306658 TOPORSQ9NS56 1045 aaPredicted RBP18.98■□□□□ 0.63
KRT28-201ENST00000306658 AIPL1Q9NZN9 384 aa18.98■□□□□ 0.63
KRT28-201ENST00000306658 CLTAP09496 248 aa18.97■□□□□ 0.63
KRT28-201ENST00000306658 AXLP30530 894 aa18.97■□□□□ 0.63
KRT28-201ENST00000306658 CYLC1P35663 651 aaPredicted RBP18.97■□□□□ 0.63
KRT28-201ENST00000306658 PTPN11Q06124 597 aaPredicted RBP18.97■□□□□ 0.63
KRT28-201ENST00000306658 RAPGEF1Q13905 1077 aa18.97■□□□□ 0.63
KRT28-201ENST00000306658 MTF1Q14872 753 aa18.97■□□□□ 0.63
KRT28-201ENST00000306658 SNX17Q15036 470 aa18.97■□□□□ 0.63
KRT28-201ENST00000306658 SERINC5Q86VE9 423 aa18.97■□□□□ 0.63
KRT28-201ENST00000306658 GLT1D1Q96MS3 346 aa18.97■□□□□ 0.63
KRT28-201ENST00000306658 STK33Q9BYT3 514 aa18.97■□□□□ 0.63
KRT28-201ENST00000306658 CELF4Q9BZC1 486 aaKnown RBP18.97■□□□□ 0.63
KRT28-201ENST00000306658 NHEJ1Q9H9Q4 299 aaPredicted RBP18.97■□□□□ 0.63
KRT28-201ENST00000306658 RAB20Q9NX57 234 aa18.97■□□□□ 0.63
KRT28-201ENST00000306658 WBP1LQ9NX94 342 aa18.97■□□□□ 0.63
KRT28-201ENST00000306658 TRMT1Q9NXH9 659 aaKnown RBP18.97■□□□□ 0.63
KRT28-201ENST00000306658 DNAJC12Q9UKB3 198 aa18.97■□□□□ 0.63
KRT28-201ENST00000306658 EPN1Q9Y6I3 576 aaPredicted RBP18.97■□□□□ 0.63
KRT28-201ENST00000306658 CENPFP49454 3210 aa18.96■□□□□ 0.63
KRT28-201ENST00000306658 CCDC175P0C221 793 aa18.96■□□□□ 0.63
KRT28-201ENST00000306658 CLCN1P35523 988 aa18.96■□□□□ 0.63
KRT28-201ENST00000306658 ITGA7Q13683 1181 aa18.96■□□□□ 0.63
KRT28-201ENST00000306658 DCAF4L1Q3SXM0 396 aa18.96■□□□□ 0.63
KRT28-201ENST00000306658 ZACNQ401N2 412 aa18.96■□□□□ 0.63
KRT28-201ENST00000306658 SLC9C1Q4G0N8 1177 aa18.96■□□□□ 0.63
KRT28-201ENST00000306658 IQCEQ6IPM2 695 aa18.96■□□□□ 0.63
KRT28-201ENST00000306658 C15orf39Q6ZRI6 1047 aa18.96■□□□□ 0.63
KRT28-201ENST00000306658 TOGARAM2Q6ZUX3 1019 aa18.96■□□□□ 0.63
KRT28-201ENST00000306658 WDR49Q8IV35 697 aa18.96■□□□□ 0.63
KRT28-201ENST00000306658 ZNF516Q92618 1163 aa18.96■□□□□ 0.63
KRT28-201ENST00000306658 CCDC42Q96M95 316 aa18.96■□□□□ 0.63
KRT28-201ENST00000306658 RPF1Q9H9Y2 349 aaKnown RBP18.96■□□□□ 0.63
KRT28-201ENST00000306658 PTPN22Q9Y2R2 807 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms