RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 NR5A1Q13285 461 aa8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 ARHGAP15Q53QZ3 475 aa8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 IFT43Q96FT9 208 aa8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 TMEM169Q96HH4 297 aa8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 ABHD8Q96I13 439 aa8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 HEXIM2Q96MH2 286 aaKnown RBP8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 MTG1Q9BT17 334 aaPredicted RBP8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 COLEC11Q9BWP8 271 aa8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 SPATC1LQ9H0A9 340 aa8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 KDM3BQ7LBC6 1761 aa8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 SLC16A3O15427 465 aaKnown RBP8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 ZBTB48P10074 688 aaPredicted RBP8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 GNL1P36915 607 aaPredicted RBP8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 DARS2Q6PI48 645 aaKnown RBP8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 USP17L6PQ6QN14 398 aa8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 SAMD7Q7Z3H4 446 aa8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 PBKQ96KB5 322 aa8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 SYNDIG1Q9H7V2 258 aa8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 RRAGCQ9HB90 399 aa8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 APBA1Q02410 837 aa8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 HACD3Q9P035 362 aa8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 E9PMD0 336 aa8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 WNT10BO00744 389 aa8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 OCRLQ01968 901 aa8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 IMPG1Q17R60 797 aa8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 DEFB115Q30KQ5 88 aa8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 GPD1LQ8N335 351 aa8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 OR9Q1Q8NGQ5 310 aa8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 SPATA17Q96L03 361 aa8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 TSSK1BQ9BXA7 367 aa8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 LRP6O75581 1613 aa8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 CYP2D6P10635 497 aa8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 PYGBP11216 843 aa8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 ACADSBP45954 432 aa8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 ZBED6P86452 979 aa8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 IQSEC1Q6DN90 963 aa8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 SLC44A5Q8NCS7 719 aa8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 USP13Q92995 863 aaPredicted RBP8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 FOPNLQ96NB1 174 aa8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 AGO2Q9UKV8 859 aaKnown RBP8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 EMSYQ7Z589 1322 aa8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 GOLGA8MH3BSY2 632 aa8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 PDXKO00764 312 aa8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 SUN1O94901 812 aa8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 AKR1A1P14550 325 aa8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 RASA1P20936 1047 aa8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 MED21Q13503 144 aa8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 LONRF3Q496Y0 759 aa8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 HAUS6Q7Z4H7 955 aa8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 TXNRD3Q86VQ6 643 aa8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 FHDC1Q9C0D6 1143 aaPredicted RBP8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 CYP26B1Q9NR63 512 aa8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 ASNSD1Q9NWL6 643 aa8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 RBAKQ9NYW8 714 aaPredicted RBP8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 CLIC4Q9Y696 253 aa8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 TMEM88BA6NKF7 163 aa8.83□□□□□ -1
PCDHB1-201ENST00000306549 MED15Q96RN5 788 aa8.83□□□□□ -1
PCDHB1-201ENST00000306549 TSPAN18Q96SJ8 248 aa8.83□□□□□ -1
PCDHB1-201ENST00000306549 KDM4CQ9H3R0 1056 aa8.83□□□□□ -1
PCDHB1-201ENST00000306549 SYTL2Q9HCH5 934 aa8.83□□□□□ -1
PCDHB1-201ENST00000306549 BAIAP2L1Q9UHR4 511 aa8.83□□□□□ -1
PCDHB1-201ENST00000306549 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.83□□□□□ -1
PCDHB1-201ENST00000306549 TJP3O95049 919 aa8.83□□□□□ -1
PCDHB1-201ENST00000306549 ALDH1A3P47895 512 aa8.83□□□□□ -1
PCDHB1-201ENST00000306549 POLR2FP61218 127 aaKnown RBP8.83□□□□□ -1
PCDHB1-201ENST00000306549 RWDD4Q6NW29 188 aaKnown RBP8.83□□□□□ -1
PCDHB1-201ENST00000306549 CYFIP1Q7L576 1253 aa8.83□□□□□ -1
PCDHB1-201ENST00000306549 RBM41Q96IZ5 413 aaKnown RBP8.83□□□□□ -1
PCDHB1-201ENST00000306549 MRPL9Q9BYD2 267 aaKnown RBP8.83□□□□□ -1
PCDHB1-201ENST00000306549 NXF1Q9UBU9 619 aaKnown RBP8.83□□□□□ -1
PCDHB1-201ENST00000306549 P4HA2O15460 535 aa8.83□□□□□ -1
PCDHB1-201ENST00000306549 NR3C1P04150 777 aa8.83□□□□□ -1
PCDHB1-201ENST00000306549 EEF1B2P24534 225 aaKnown RBP8.83□□□□□ -1
PCDHB1-201ENST00000306549 CAPN12Q6ZSI9 719 aa8.83□□□□□ -1
PCDHB1-201ENST00000306549 FBXL16Q8N461 479 aa8.83□□□□□ -1
PCDHB1-201ENST00000306549 TMCO5AQ8N6Q1 288 aa8.83□□□□□ -1
PCDHB1-201ENST00000306549 ZNF557Q8N988 423 aaPredicted RBP8.83□□□□□ -1
PCDHB1-201ENST00000306549 OR6B3Q8NGW1 331 aa8.83□□□□□ -1
PCDHB1-201ENST00000306549 ASPSCR1Q9BZE9 553 aa8.83□□□□□ -1
PCDHB1-201ENST00000306549 EPN1Q9Y6I3 576 aaPredicted RBP8.83□□□□□ -1
PCDHB1-201ENST00000306549 AXLP30530 894 aa8.83□□□□□ -1
PCDHB1-201ENST00000306549 FXR2P51116 673 aaKnown RBP eCLIP8.83□□□□□ -1
PCDHB1-201ENST00000306549 NT5DC4Q86YG4 428 aa8.83□□□□□ -1
PCDHB1-201ENST00000306549 FSD1LQ9BXM9 530 aa8.83□□□□□ -1
PCDHB1-201ENST00000306549 LMBRD1Q9NUN5 540 aa8.83□□□□□ -1
PCDHB1-201ENST00000306549 TXLNGQ9NUQ3 528 aa8.83□□□□□ -1
PCDHB1-201ENST00000306549 CLCA2Q9UQC9 943 aa8.83□□□□□ -1
PCDHB1-201ENST00000306549 PCDHA5Q9Y5H7 936 aa8.83□□□□□ -1
PCDHB1-201ENST00000306549 MIF4GDA9UHW6 222 aaKnown RBP8.83□□□□□ -1
PCDHB1-201ENST00000306549 EXOSC10Q01780 885 aaKnown RBP8.83□□□□□ -1
PCDHB1-201ENST00000306549 RRM2BQ7LG56 351 aa8.83□□□□□ -1
PCDHB1-201ENST00000306549 ERICH1Q86X53 443 aa8.83□□□□□ -1
PCDHB1-201ENST00000306549 DCP1BQ8IZD4 617 aaKnown RBP8.83□□□□□ -1
PCDHB1-201ENST00000306549 DEPDC1BQ8WUY9 529 aa8.83□□□□□ -1
PCDHB1-201ENST00000306549 ULK4Q96C45 1275 aa8.83□□□□□ -1
PCDHB1-201ENST00000306549 ASIC4Q96FT7 647 aa8.83□□□□□ -1
PCDHB1-201ENST00000306549 CFAP36Q96G28 342 aa8.83□□□□□ -1
PCDHB1-201ENST00000306549 CARD6Q9BX69 1037 aa8.83□□□□□ -1
PCDHB1-201ENST00000306549 SEC24BO95487 1268 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms