RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 GOLGA8JA6NMD2 632 aa13.88□□□□□ -0.19
TRIM35-201ENST00000305364 CNGA1P29973 690 aa13.88□□□□□ -0.19
TRIM35-201ENST00000305364 TAF1BQ53T94 588 aaPredicted RBP13.88□□□□□ -0.19
TRIM35-201ENST00000305364 CCDC125Q86Z20 511 aa13.88□□□□□ -0.19
TRIM35-201ENST00000305364 MAML1Q92585 1016 aa13.88□□□□□ -0.19
TRIM35-201ENST00000305364 ANKRD27Q96NW4 1050 aa13.88□□□□□ -0.19
TRIM35-201ENST00000305364 TBC1D10AQ9BXI6 508 aa13.88□□□□□ -0.19
TRIM35-201ENST00000305364 KIAA1683Q9H0B3 1180 aa13.88□□□□□ -0.19
TRIM35-201ENST00000305364 G3BP2Q9UN86 482 aaKnown RBP13.88□□□□□ -0.19
TRIM35-201ENST00000305364 M0R2N6 131 aa13.88□□□□□ -0.19
TRIM35-201ENST00000305364 CCDC22O60826 627 aa13.88□□□□□ -0.19
TRIM35-201ENST00000305364 NR1H3Q13133 447 aa13.88□□□□□ -0.19
TRIM35-201ENST00000305364 SUPT20HQ8NEM7 779 aa13.88□□□□□ -0.19
TRIM35-201ENST00000305364 RUSC1Q9BVN2 902 aa13.88□□□□□ -0.19
TRIM35-201ENST00000305364 ANGPTL2Q9UKU9 493 aa13.88□□□□□ -0.19
TRIM35-201ENST00000305364 AGTPBP1Q9UPW5 1226 aa13.88□□□□□ -0.19
TRIM35-201ENST00000305364 RPTORQ8N122 1335 aa13.88□□□□□ -0.19
TRIM35-201ENST00000305364 ARFIP2P53365 341 aa13.88□□□□□ -0.19
TRIM35-201ENST00000305364 GRIK3Q13003 919 aa13.88□□□□□ -0.19
TRIM35-201ENST00000305364 MTFR1Q15390 333 aa13.88□□□□□ -0.19
TRIM35-201ENST00000305364 NLRP9Q7RTR0 991 aa13.88□□□□□ -0.19
TRIM35-201ENST00000305364 MFN1Q8IWA4 741 aa13.88□□□□□ -0.19
TRIM35-201ENST00000305364 CTAGE3PQ8IX95 158 aa13.88□□□□□ -0.19
TRIM35-201ENST00000305364 ATL2Q8NHH9 583 aa13.88□□□□□ -0.19
TRIM35-201ENST00000305364 ZCWPW1Q9H0M4 648 aa13.88□□□□□ -0.19
TRIM35-201ENST00000305364 ZDHHC18Q9NUE0 388 aa13.88□□□□□ -0.19
TRIM35-201ENST00000305364 TRAF3IP3Q9Y228 551 aa13.88□□□□□ -0.19
TRIM35-201ENST00000305364 ZWINTO95229 277 aa13.87□□□□□ -0.19
TRIM35-201ENST00000305364 PHBP35232 272 aa13.87□□□□□ -0.19
TRIM35-201ENST00000305364 NSFP46459 744 aaKnown RBP13.87□□□□□ -0.19
TRIM35-201ENST00000305364 SNX30Q5VWJ9 437 aa13.87□□□□□ -0.19
TRIM35-201ENST00000305364 TXNRD3Q86VQ6 643 aa13.87□□□□□ -0.19
TRIM35-201ENST00000305364 RBBP8NLQ8NC74 664 aaPredicted RBP13.87□□□□□ -0.19
TRIM35-201ENST00000305364 TTC8Q8TAM2 541 aa13.87□□□□□ -0.19
TRIM35-201ENST00000305364 TTC17Q96AE7 1141 aa13.87□□□□□ -0.19
TRIM35-201ENST00000305364 HAUS1Q96CS2 278 aa13.87□□□□□ -0.19
TRIM35-201ENST00000305364 MYH7BA7E2Y1 1941 aa13.87□□□□□ -0.19
TRIM35-201ENST00000305364 DDX3YO15523 660 aaKnown RBP13.87□□□□□ -0.19
TRIM35-201ENST00000305364 ATP9AO75110 1047 aa13.87□□□□□ -0.19
TRIM35-201ENST00000305364 CAMTA2O94983 1202 aa13.87□□□□□ -0.19
TRIM35-201ENST00000305364 AKR1B1P15121 316 aa13.87□□□□□ -0.19
TRIM35-201ENST00000305364 TCP10Q12799 353 aa13.87□□□□□ -0.19
TRIM35-201ENST00000305364 MTDHQ86UE4 582 aaKnown RBP13.87□□□□□ -0.19
TRIM35-201ENST00000305364 FBXO11Q86XK2 927 aa13.87□□□□□ -0.19
TRIM35-201ENST00000305364 ZBED8Q8IZ13 594 aa13.87□□□□□ -0.19
TRIM35-201ENST00000305364 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.87□□□□□ -0.19
TRIM35-201ENST00000305364 TUBB6Q9BUF5 446 aa13.87□□□□□ -0.19
TRIM35-201ENST00000305364 JMJD4Q9H9V9 463 aa13.87□□□□□ -0.19
TRIM35-201ENST00000305364 SLCO1B3Q9NPD5 702 aa13.87□□□□□ -0.19
TRIM35-201ENST00000305364 ARHGEF3Q9NR81 526 aa13.87□□□□□ -0.19
TRIM35-201ENST00000305364 IGSF9BQ9UPX0 1349 aa13.87□□□□□ -0.19
TRIM35-201ENST00000305364 SGK1O00141 431 aa13.87□□□□□ -0.19
TRIM35-201ENST00000305364 ATP6V1C1P21283 382 aa13.87□□□□□ -0.19
TRIM35-201ENST00000305364 ROR2Q01974 943 aaKnown RBP13.87□□□□□ -0.19
TRIM35-201ENST00000305364 BFSP1Q12934 665 aa13.87□□□□□ -0.19
TRIM35-201ENST00000305364 SLFN13Q68D06 897 aa13.87□□□□□ -0.19
TRIM35-201ENST00000305364 ECHDC2Q86YB7 292 aa13.87□□□□□ -0.19
TRIM35-201ENST00000305364 MORC4Q8TE76 937 aa13.87□□□□□ -0.19
TRIM35-201ENST00000305364 CNKSR1Q969H4 720 aa13.87□□□□□ -0.19
TRIM35-201ENST00000305364 PWWP2AQ96N64 755 aa13.87□□□□□ -0.19
TRIM35-201ENST00000305364 CENPKQ9BS16 269 aa13.87□□□□□ -0.19
TRIM35-201ENST00000305364 EHMT1Q9H9B1 1298 aa13.87□□□□□ -0.19
TRIM35-201ENST00000305364 hCG_2014768A0A024R1R8 64 aa13.86□□□□□ -0.19
TRIM35-201ENST00000305364 MAGEA4P43358 317 aa13.86□□□□□ -0.19
TRIM35-201ENST00000305364 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.86□□□□□ -0.19
TRIM35-201ENST00000305364 LVRNQ6Q4G3 990 aa13.86□□□□□ -0.19
TRIM35-201ENST00000305364 ZDHHC24Q6UX98 284 aa13.86□□□□□ -0.19
TRIM35-201ENST00000305364 HAS1Q92839 578 aa13.86□□□□□ -0.19
TRIM35-201ENST00000305364 NT5C1BQ96P26 610 aa13.86□□□□□ -0.19
TRIM35-201ENST00000305364 AMNQ9BXJ7 453 aa13.86□□□□□ -0.19
TRIM35-201ENST00000305364 SYNCQ9H7C4 482 aa13.86□□□□□ -0.19
TRIM35-201ENST00000305364 RAB20Q9NX57 234 aa13.86□□□□□ -0.19
TRIM35-201ENST00000305364 MTMR4Q9NYA4 1195 aa13.86□□□□□ -0.19
TRIM35-201ENST00000305364 SERPINB13Q9UIV8 391 aa13.86□□□□□ -0.19
TRIM35-201ENST00000305364 PGM1P36871 562 aa13.86□□□□□ -0.19
TRIM35-201ENST00000305364 CPA2P48052 419 aa13.86□□□□□ -0.19
TRIM35-201ENST00000305364 CACNA2D1P54289 1103 aa13.86□□□□□ -0.19
TRIM35-201ENST00000305364 QRICH1Q2TAL8 776 aa13.86□□□□□ -0.19
TRIM35-201ENST00000305364 SLFN11Q7Z7L1 901 aa13.86□□□□□ -0.19
TRIM35-201ENST00000305364 TBC1D16Q8TBP0 767 aa13.86□□□□□ -0.19
TRIM35-201ENST00000305364 SLC4A9Q96Q91 983 aa13.86□□□□□ -0.19
TRIM35-201ENST00000305364 LIN7AO14910 233 aaPredicted RBP13.86□□□□□ -0.19
TRIM35-201ENST00000305364 GTF2IP78347 998 aa13.86□□□□□ -0.19
TRIM35-201ENST00000305364 SLC35G1Q2M3R5 365 aa13.86□□□□□ -0.19
TRIM35-201ENST00000305364 P3H1Q32P28 736 aa13.86□□□□□ -0.19
TRIM35-201ENST00000305364 RNF220Q5VTB9 566 aa13.86□□□□□ -0.19
TRIM35-201ENST00000305364 SMIM5Q71RC9 77 aa13.86□□□□□ -0.19
TRIM35-201ENST00000305364 FAM13CQ8NE31 585 aa13.86□□□□□ -0.19
TRIM35-201ENST00000305364 B4GALNT2Q8NHY0 566 aa13.86□□□□□ -0.19
TRIM35-201ENST00000305364 KLF6Q99612 283 aaPredicted RBP13.86□□□□□ -0.19
TRIM35-201ENST00000305364 EIF2AK1Q9BQI3 630 aaKnown RBP13.86□□□□□ -0.19
TRIM35-201ENST00000305364 WHRNQ9P202 907 aa13.86□□□□□ -0.19
TRIM35-201ENST00000305364 PCYOX1Q9UHG3 505 aa13.86□□□□□ -0.19
TRIM35-201ENST00000305364 CHKAP35790 457 aa13.85□□□□□ -0.19
TRIM35-201ENST00000305364 MARSP56192 900 aaKnown RBP13.85□□□□□ -0.19
TRIM35-201ENST00000305364 LRRC36Q1X8D7 754 aa13.85□□□□□ -0.19
TRIM35-201ENST00000305364 RNF43Q68DV7 783 aa13.85□□□□□ -0.19
TRIM35-201ENST00000305364 DCUN1D2Q6PH85 259 aa13.85□□□□□ -0.19
TRIM35-201ENST00000305364 ZNF384Q8TF68 577 aa13.85□□□□□ -0.19
TRIM35-201ENST00000305364 VTI1AQ96AJ9 217 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms