RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 RHPN2Q8IUC4 686 aa11.45□□□□□ -0.58
CLP1-201ENST00000302731 GPIHBP1Q8IV16 184 aa11.45□□□□□ -0.58
CLP1-201ENST00000302731 BRSK2Q8IWQ3 736 aa11.45□□□□□ -0.58
CLP1-201ENST00000302731 GPR161Q8N6U8 529 aaKnown RBP11.45□□□□□ -0.58
CLP1-201ENST00000302731 LRRN4CLQ8ND94 238 aa11.45□□□□□ -0.58
CLP1-201ENST00000302731 USP6NLQ92738 828 aa11.45□□□□□ -0.58
CLP1-201ENST00000302731 ZBTB45Q96K62 511 aaPredicted RBP11.45□□□□□ -0.58
CLP1-201ENST00000302731 CALR3Q96L12 384 aaKnown RBP11.45□□□□□ -0.58
CLP1-201ENST00000302731 POP1Q99575 1024 aaKnown RBP11.45□□□□□ -0.58
CLP1-201ENST00000302731 CGRRF1Q99675 332 aa11.45□□□□□ -0.58
CLP1-201ENST00000302731 TUT1Q9H6E5 874 aaKnown RBP11.45□□□□□ -0.58
CLP1-201ENST00000302731 PRMT7Q9NVM4 692 aaPredicted RBP11.45□□□□□ -0.58
CLP1-201ENST00000302731 SALL4Q9UJQ4 1053 aa11.45□□□□□ -0.58
CLP1-201ENST00000302731 CTAGE15A4D2H0 777 aa11.44□□□□□ -0.58
CLP1-201ENST00000302731 ABLIM1O14639 778 aa11.44□□□□□ -0.58
CLP1-201ENST00000302731 OGTO15294 1046 aa11.44□□□□□ -0.58
CLP1-201ENST00000302731 FAM189A1O60320 539 aa11.44□□□□□ -0.58
CLP1-201ENST00000302731 EDN1P05305 212 aa11.44□□□□□ -0.58
CLP1-201ENST00000302731 CTAGE8P0CG41 777 aa11.44□□□□□ -0.58
CLP1-201ENST00000302731 PNMA6AP0CW24 399 aaPredicted RBP11.44□□□□□ -0.58
CLP1-201ENST00000302731 SRGAP2CP0DJJ0 459 aa11.44□□□□□ -0.58
CLP1-201ENST00000302731 TCP1P17987 556 aaKnown RBP11.44□□□□□ -0.58
CLP1-201ENST00000302731 TNNI1P19237 187 aa11.44□□□□□ -0.58
CLP1-201ENST00000302731 TNFAIP3P21580 790 aa11.44□□□□□ -0.58
CLP1-201ENST00000302731 MATR3P43243 847 aaKnown RBP eCLIP11.44□□□□□ -0.58
CLP1-201ENST00000302731 PHKA2P46019 1235 aa11.44□□□□□ -0.58
CLP1-201ENST00000302731 ACOT2P49753 483 aa11.44□□□□□ -0.58
CLP1-201ENST00000302731 TNFAIP2Q03169 654 aa11.44□□□□□ -0.58
CLP1-201ENST00000302731 SREBF2Q12772 1141 aa11.44□□□□□ -0.58
CLP1-201ENST00000302731 NAA30Q147X3 362 aaPredicted RBP11.44□□□□□ -0.58
CLP1-201ENST00000302731 ELF2Q15723 593 aa11.44□□□□□ -0.58
CLP1-201ENST00000302731 CTAGE6Q86UF2 777 aa11.44□□□□□ -0.58
CLP1-201ENST00000302731 CTAGE4Q8IX94 777 aa11.44□□□□□ -0.58
CLP1-201ENST00000302731 PPM1KQ8N3J5 372 aa11.44□□□□□ -0.58
CLP1-201ENST00000302731 METTL13Q8N6R0 699 aa11.44□□□□□ -0.58
CLP1-201ENST00000302731 OR6J1Q8NGC5 347 aa11.44□□□□□ -0.58
CLP1-201ENST00000302731 LNX1Q8TBB1 728 aaPredicted RBP11.44□□□□□ -0.58
CLP1-201ENST00000302731 TRAPPC12Q8WVT3 735 aa11.44□□□□□ -0.58
CLP1-201ENST00000302731 SOCS4Q8WXH5 440 aa11.44□□□□□ -0.58
CLP1-201ENST00000302731 ZNF516Q92618 1163 aa11.44□□□□□ -0.58
CLP1-201ENST00000302731 DHX38Q92620 1227 aaKnown RBP11.44□□□□□ -0.58
CLP1-201ENST00000302731 CCDC102AQ96A19 550 aa11.44□□□□□ -0.58
CLP1-201ENST00000302731 KREMEN1Q96MU8 473 aa11.44□□□□□ -0.58
CLP1-201ENST00000302731 AGPAT1Q99943 283 aa11.44□□□□□ -0.58
CLP1-201ENST00000302731 ZFYVE28Q9HCC9 887 aa11.44□□□□□ -0.58
CLP1-201ENST00000302731 PTPRHQ9HD43 1115 aa11.44□□□□□ -0.58
CLP1-201ENST00000302731 TOPORSQ9NS56 1045 aaPredicted RBP11.44□□□□□ -0.58
CLP1-201ENST00000302731 ANKFY1Q9P2R3 1169 aa11.44□□□□□ -0.58
CLP1-201ENST00000302731 ZHX1Q9UKY1 873 aaPredicted RBP11.44□□□□□ -0.58
CLP1-201ENST00000302731 SNX12Q9UMY4 172 aa11.44□□□□□ -0.58
CLP1-201ENST00000302731 TNFSF13BQ9Y275 285 aa11.44□□□□□ -0.58
CLP1-201ENST00000302731 TLL2Q9Y6L7 1015 aa11.44□□□□□ -0.58
CLP1-201ENST00000302731 CNTNAP2Q9UHC6 1331 aa11.44□□□□□ -0.58
CLP1-201ENST00000302731 ZSWIM8A7E2V4 1837 aa11.43□□□□□ -0.58
CLP1-201ENST00000302731 RRN3P2A6NIE6 340 aa11.43□□□□□ -0.58
CLP1-201ENST00000302731 A6NJR5 290 aa11.43□□□□□ -0.58
CLP1-201ENST00000302731 ENC1O14682 589 aa11.43□□□□□ -0.58
CLP1-201ENST00000302731 LRRN2O75325 713 aa11.43□□□□□ -0.58
CLP1-201ENST00000302731 IGHA2P01877 340 aa11.43□□□□□ -0.58
CLP1-201ENST00000302731 TMEM253P0C7T8 217 aa11.43□□□□□ -0.58
CLP1-201ENST00000302731 RGS2P41220 211 aa11.43□□□□□ -0.58
CLP1-201ENST00000302731 CLCN3P51790 818 aa11.43□□□□□ -0.58
CLP1-201ENST00000302731 MBTD1Q05BQ5 628 aa11.43□□□□□ -0.58
CLP1-201ENST00000302731 ITIH3Q06033 890 aa11.43□□□□□ -0.58
CLP1-201ENST00000302731 WDR44Q5JSH3 913 aa11.43□□□□□ -0.58
CLP1-201ENST00000302731 MPZL3Q6UWV2 235 aa11.43□□□□□ -0.58
CLP1-201ENST00000302731 WDR49Q8IV35 697 aa11.43□□□□□ -0.58
CLP1-201ENST00000302731 GLYCTKQ8IVS8 523 aa11.43□□□□□ -0.58
CLP1-201ENST00000302731 U2AF1L4Q8WU68 220 aaKnown RBP11.43□□□□□ -0.58
CLP1-201ENST00000302731 UBE2Q2Q8WVN8 375 aa11.43□□□□□ -0.58
CLP1-201ENST00000302731 HHIPL1Q96JK4 782 aa11.43□□□□□ -0.58
CLP1-201ENST00000302731 NLRP4Q96MN2 994 aa11.43□□□□□ -0.58
CLP1-201ENST00000302731 PACSIN1Q9BY11 444 aa11.43□□□□□ -0.58
CLP1-201ENST00000302731 PDE11AQ9HCR9 933 aa11.43□□□□□ -0.58
CLP1-201ENST00000302731 C1orf112Q9NSG2 853 aa11.43□□□□□ -0.58
CLP1-201ENST00000302731 RNF14Q9UBS8 474 aa11.43□□□□□ -0.58
CLP1-201ENST00000302731 CPSF3Q9UKF6 684 aaKnown RBP11.43□□□□□ -0.58
CLP1-201ENST00000302731 GNEQ9Y223 722 aaKnown RBP11.43□□□□□ -0.58
CLP1-201ENST00000302731 Q9Y3F1 56 aa11.43□□□□□ -0.58
CLP1-201ENST00000302731 HYOU1Q9Y4L1 999 aa11.43□□□□□ -0.58
CLP1-201ENST00000302731 ANKRD62A6NC57 917 aa11.42□□□□□ -0.58
CLP1-201ENST00000302731 INO80B-WBP1J3KQ70 363 aa11.42□□□□□ -0.58
CLP1-201ENST00000302731 BUB1O43683 1085 aa11.42□□□□□ -0.58
CLP1-201ENST00000302731 TUBBP07437 444 aa11.42□□□□□ -0.58
CLP1-201ENST00000302731 GZMAP12544 262 aa11.42□□□□□ -0.58
CLP1-201ENST00000302731 NAP1L1P55209 391 aaKnown RBP11.42□□□□□ -0.58
CLP1-201ENST00000302731 CDC42EP1Q00587 391 aa11.42□□□□□ -0.58
CLP1-201ENST00000302731 TCEAL1Q15170 157 aa11.42□□□□□ -0.58
CLP1-201ENST00000302731 KYAT1Q16773 422 aa11.42□□□□□ -0.58
CLP1-201ENST00000302731 ATF7IP2Q5U623 682 aa11.42□□□□□ -0.58
CLP1-201ENST00000302731 TDRD10Q5VZ19 366 aaKnown RBP11.42□□□□□ -0.58
CLP1-201ENST00000302731 MTHFD1LQ6UB35 978 aa11.42□□□□□ -0.58
CLP1-201ENST00000302731 ZNF572Q7Z3I7 529 aaPredicted RBP11.42□□□□□ -0.58
CLP1-201ENST00000302731 EPS8L1Q8TE68 723 aa11.42□□□□□ -0.58
CLP1-201ENST00000302731 LMBR1Q8WVP7 490 aa11.42□□□□□ -0.58
CLP1-201ENST00000302731 TCHPQ9BT92 498 aa11.42□□□□□ -0.58
CLP1-201ENST00000302731 INO80BQ9C086 356 aaPredicted RBP11.42□□□□□ -0.58
CLP1-201ENST00000302731 IFT122Q9HBG6 1241 aa11.42□□□□□ -0.58
CLP1-201ENST00000302731 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.42□□□□□ -0.58
CLP1-201ENST00000302731 V9GYY5 206 aaPredicted RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms