RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 PLPP4Q5VZY2 271 aa12.39□□□□□ -0.43
CLCC1-201ENST00000302500 RBM23Q86U06 439 aaKnown RBP12.39□□□□□ -0.43
CLCC1-201ENST00000302500 VPS52Q8N1B4 723 aa12.39□□□□□ -0.43
CLCC1-201ENST00000302500 DEPTORQ8TB45 409 aa12.39□□□□□ -0.43
CLCC1-201ENST00000302500 AUTS2Q8WXX7 1259 aa12.39□□□□□ -0.43
CLCC1-201ENST00000302500 CCDC43Q96MW1 224 aaKnown RBP12.39□□□□□ -0.43
CLCC1-201ENST00000302500 ZMAT2Q96NC0 199 aaKnown RBP12.39□□□□□ -0.43
CLCC1-201ENST00000302500 TARS2Q9BW92 718 aaKnown RBP12.39□□□□□ -0.43
CLCC1-201ENST00000302500 HCFC2Q9Y5Z7 792 aa12.39□□□□□ -0.43
CLCC1-201ENST00000302500 DMDP11532 3685 aa12.39□□□□□ -0.43
CLCC1-201ENST00000302500 ZNF318Q5VUA4 2279 aa12.39□□□□□ -0.43
CLCC1-201ENST00000302500 CARNS1A5YM72 827 aa12.38□□□□□ -0.43
CLCC1-201ENST00000302500 SOD2P04179 222 aa12.38□□□□□ -0.43
CLCC1-201ENST00000302500 DDIT3P35638 169 aa12.38□□□□□ -0.43
CLCC1-201ENST00000302500 GRM5P41594 1212 aa12.38□□□□□ -0.43
CLCC1-201ENST00000302500 SOX4Q06945 474 aaPredicted RBP12.38□□□□□ -0.43
CLCC1-201ENST00000302500 RAD51AP2Q09MP3 1159 aa12.38□□□□□ -0.43
CLCC1-201ENST00000302500 DMP1Q13316 513 aaPredicted RBP12.38□□□□□ -0.43
CLCC1-201ENST00000302500 CBX2Q14781 532 aaPredicted RBP12.38□□□□□ -0.43
CLCC1-201ENST00000302500 SPOUT1Q5T280 376 aaKnown RBP12.38□□□□□ -0.43
CLCC1-201ENST00000302500 GPR65Q8IYL9 337 aa12.38□□□□□ -0.43
CLCC1-201ENST00000302500 C3orf58Q8NDZ4 430 aa12.38□□□□□ -0.43
CLCC1-201ENST00000302500 URGCPQ8TCY9 931 aa12.38□□□□□ -0.43
CLCC1-201ENST00000302500 LARP4BQ92615 738 aaKnown RBP12.38□□□□□ -0.43
CLCC1-201ENST00000302500 TMEM169Q96HH4 297 aa12.38□□□□□ -0.43
CLCC1-201ENST00000302500 ZBTB45Q96K62 511 aaPredicted RBP12.38□□□□□ -0.43
CLCC1-201ENST00000302500 HERC2P3Q9BVR0 1158 aa12.38□□□□□ -0.43
CLCC1-201ENST00000302500 GPR62Q9BZJ7 368 aa12.38□□□□□ -0.43
CLCC1-201ENST00000302500 ST6GALNAC4Q9H4F1 302 aa12.38□□□□□ -0.43
CLCC1-201ENST00000302500 TLE6Q9H808 572 aa12.38□□□□□ -0.43
CLCC1-201ENST00000302500 RXFP1Q9HBX9 757 aa12.38□□□□□ -0.43
CLCC1-201ENST00000302500 KLK14Q9P0G3 267 aa12.38□□□□□ -0.43
CLCC1-201ENST00000302500 CDH22Q9UJ99 828 aa12.38□□□□□ -0.43
CLCC1-201ENST00000302500 RBM19Q9Y4C8 960 aaKnown RBP12.38□□□□□ -0.43
CLCC1-201ENST00000302500 MYMKA6NI61 221 aa12.37□□□□□ -0.43
CLCC1-201ENST00000302500 TMEM189-UBE2V1I3L0A0 370 aa12.37□□□□□ -0.43
CLCC1-201ENST00000302500 K7ERI5 159 aa12.37□□□□□ -0.43
CLCC1-201ENST00000302500 PPP6R2O75170 966 aa12.37□□□□□ -0.43
CLCC1-201ENST00000302500 F13A1P00488 732 aa12.37□□□□□ -0.43
CLCC1-201ENST00000302500 CNPP09543 421 aaKnown RBP12.37□□□□□ -0.43
CLCC1-201ENST00000302500 ZSCAN22P10073 491 aaPredicted RBP12.37□□□□□ -0.43
CLCC1-201ENST00000302500 UBA7P41226 1012 aa12.37□□□□□ -0.43
CLCC1-201ENST00000302500 GTF2BQ00403 316 aa12.37□□□□□ -0.43
CLCC1-201ENST00000302500 DSG1Q02413 1049 aa12.37□□□□□ -0.43
CLCC1-201ENST00000302500 KRT17Q04695 432 aa12.37□□□□□ -0.43
CLCC1-201ENST00000302500 MCL1Q07820 350 aa12.37□□□□□ -0.43
CLCC1-201ENST00000302500 SMC1AQ14683 1233 aaKnown RBP12.37□□□□□ -0.43
CLCC1-201ENST00000302500 PUS10Q3MIT2 529 aaKnown RBP12.37□□□□□ -0.43
CLCC1-201ENST00000302500 DCAF4L1Q3SXM0 396 aa12.37□□□□□ -0.43
CLCC1-201ENST00000302500 ANKRD54Q6NXT1 300 aa12.37□□□□□ -0.43
CLCC1-201ENST00000302500 SHC4Q6S5L8 630 aa12.37□□□□□ -0.43
CLCC1-201ENST00000302500 ZPBP2Q6X784 338 aa12.37□□□□□ -0.43
CLCC1-201ENST00000302500 SNX27Q96L92 541 aa12.37□□□□□ -0.43
CLCC1-201ENST00000302500 IFT74Q96LB3 600 aa12.37□□□□□ -0.43
CLCC1-201ENST00000302500 IGFLR1Q9H665 355 aa12.37□□□□□ -0.43
CLCC1-201ENST00000302500 KMT5AQ9NQR1 393 aa12.37□□□□□ -0.43
CLCC1-201ENST00000302500 CNTN3Q9P232 1028 aa12.37□□□□□ -0.43
CLCC1-201ENST00000302500 PRKAG3Q9UGI9 489 aa12.37□□□□□ -0.43
CLCC1-201ENST00000302500 CD207Q9UJ71 328 aa12.37□□□□□ -0.43
CLCC1-201ENST00000302500 STYXL1Q9Y6J8 313 aa12.37□□□□□ -0.43
CLCC1-201ENST00000302500 MYO15AQ9UKN7 3530 aa12.37□□□□□ -0.43
CLCC1-201ENST00000302500 LOC730098B7Z3J9 87 aa12.37□□□□□ -0.43
CLCC1-201ENST00000302500 TOM1L1O75674 476 aa12.37□□□□□ -0.43
CLCC1-201ENST00000302500 KIF4AO95239 1232 aa12.37□□□□□ -0.43
CLCC1-201ENST00000302500 YEATS4O95619 227 aa12.37□□□□□ -0.43
CLCC1-201ENST00000302500 ALDH2P05091 517 aa12.37□□□□□ -0.43
CLCC1-201ENST00000302500 MCF2P10911 925 aa12.37□□□□□ -0.43
CLCC1-201ENST00000302500 KCNE1P15382 129 aa12.37□□□□□ -0.43
CLCC1-201ENST00000302500 CLCN4P51793 760 aa12.37□□□□□ -0.43
CLCC1-201ENST00000302500 TUSC3Q13454 348 aa12.37□□□□□ -0.43
CLCC1-201ENST00000302500 ZBTB6Q15916 424 aa12.37□□□□□ -0.43
CLCC1-201ENST00000302500 SLC10A6Q3KNW5 377 aa12.37□□□□□ -0.43
CLCC1-201ENST00000302500 LILRA6Q6PI73 481 aa12.37□□□□□ -0.43
CLCC1-201ENST00000302500 MPZL3Q6UWV2 235 aa12.37□□□□□ -0.43
CLCC1-201ENST00000302500 HAUS6Q7Z4H7 955 aa12.37□□□□□ -0.43
CLCC1-201ENST00000302500 GPBP1Q86WP2 473 aa12.37□□□□□ -0.43
CLCC1-201ENST00000302500 MAP4K3Q8IVH8 894 aa12.37□□□□□ -0.43
CLCC1-201ENST00000302500 ADHFE1Q8IWW8 467 aa12.37□□□□□ -0.43
CLCC1-201ENST00000302500 TMEM130Q8N3G9 435 aa12.37□□□□□ -0.43
CLCC1-201ENST00000302500 KLHL5Q96PQ7 755 aa12.37□□□□□ -0.43
CLCC1-201ENST00000302500 APOL6Q9BWW8 343 aa12.37□□□□□ -0.43
CLCC1-201ENST00000302500 MRPL4Q9BYD3 311 aaKnown RBP12.37□□□□□ -0.43
CLCC1-201ENST00000302500 FGFBP2Q9BYJ0 223 aa12.37□□□□□ -0.43
CLCC1-201ENST00000302500 GBP3Q9H0R5 595 aa12.37□□□□□ -0.43
CLCC1-201ENST00000302500 IKZF4Q9H2S9 585 aa12.37□□□□□ -0.43
CLCC1-201ENST00000302500 ENTPD7Q9NQZ7 604 aa12.37□□□□□ -0.43
CLCC1-201ENST00000302500 STK17AQ9UEE5 414 aa12.37□□□□□ -0.43
CLCC1-201ENST00000302500 PUF60Q9UHX1 559 aaKnown RBP12.37□□□□□ -0.43
CLCC1-201ENST00000302500 FAN1Q9Y2M0 1017 aa12.37□□□□□ -0.43
CLCC1-201ENST00000302500 USP15Q9Y4E8 981 aaPredicted RBP12.37□□□□□ -0.43
CLCC1-201ENST00000302500 SCN1AP35498 2009 aa12.36□□□□□ -0.43
CLCC1-201ENST00000302500 MYO10Q9HD67 2058 aa12.36□□□□□ -0.43
CLCC1-201ENST00000302500 SMIM28A0A1B0GU29 152 aa12.36□□□□□ -0.43
CLCC1-201ENST00000302500 FSD2A1L4K1 749 aa12.36□□□□□ -0.43
CLCC1-201ENST00000302500 CCDC169A6NNP5 214 aa12.36□□□□□ -0.43
CLCC1-201ENST00000302500 CXCL14O95715 111 aa12.36□□□□□ -0.43
CLCC1-201ENST00000302500 EPCAMP16422 314 aa12.36□□□□□ -0.43
CLCC1-201ENST00000302500 CEBPZQ03701 1054 aaKnown RBP12.36□□□□□ -0.43
CLCC1-201ENST00000302500 RNASELQ05823 741 aaKnown RBP12.36□□□□□ -0.43
CLCC1-201ENST00000302500 EHHADHQ08426 723 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms