RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 RGL1Q9NZL6 768 aa13.05□□□□□ -0.32
ABCA3-201ENST00000301732 MAD2L2Q9UI95 211 aa13.05□□□□□ -0.32
ABCA3-201ENST00000301732 CLCA2Q9UQC9 943 aa13.05□□□□□ -0.32
ABCA3-201ENST00000301732 MORC2Q9Y6X9 1032 aaPredicted RBP13.05□□□□□ -0.32
ABCA3-201ENST00000301732 HSPA9P38646 679 aaKnown RBP13.05□□□□□ -0.32
ABCA3-201ENST00000301732 PTPN12Q05209 780 aaKnown RBP13.05□□□□□ -0.32
ABCA3-201ENST00000301732 CCDC103Q8IW40 242 aa13.05□□□□□ -0.32
ABCA3-201ENST00000301732 RHOT2Q8IXI1 618 aa13.05□□□□□ -0.32
ABCA3-201ENST00000301732 RAD18Q9NS91 495 aa13.05□□□□□ -0.32
ABCA3-201ENST00000301732 AP3B1O00203 1094 aa13.05□□□□□ -0.32
ABCA3-201ENST00000301732 RGS5O15539 181 aa13.05□□□□□ -0.32
ABCA3-201ENST00000301732 FOSP01100 380 aaPredicted RBP13.05□□□□□ -0.32
ABCA3-201ENST00000301732 ELF1P32519 619 aa13.05□□□□□ -0.32
ABCA3-201ENST00000301732 EPHA10Q5JZY3 1008 aa13.05□□□□□ -0.32
ABCA3-201ENST00000301732 SHC4Q6S5L8 630 aa13.05□□□□□ -0.32
ABCA3-201ENST00000301732 RASGRP2Q7LDG7 609 aa13.05□□□□□ -0.32
ABCA3-201ENST00000301732 OPTNQ96CV9 577 aa13.05□□□□□ -0.32
ABCA3-201ENST00000301732 ELMO2Q96JJ3 720 aa13.05□□□□□ -0.32
ABCA3-201ENST00000301732 TMEM117Q9H0C3 514 aa13.05□□□□□ -0.32
ABCA3-201ENST00000301732 SP110Q9HB58 689 aa13.05□□□□□ -0.32
ABCA3-201ENST00000301732 EIF3EP60228 445 aaKnown RBP13.05□□□□□ -0.32
ABCA3-201ENST00000301732 DYNC1I2Q13409 638 aaKnown RBP13.05□□□□□ -0.32
ABCA3-201ENST00000301732 ORC1Q13415 861 aa13.05□□□□□ -0.32
ABCA3-201ENST00000301732 PRPF39Q86UA1 669 aaKnown RBP13.05□□□□□ -0.32
ABCA3-201ENST00000301732 FMR1NBQ8N0W7 255 aaPredicted RBP13.05□□□□□ -0.32
ABCA3-201ENST00000301732 NMD3Q96D46 503 aaKnown RBP13.05□□□□□ -0.32
ABCA3-201ENST00000301732 ASIC4Q96FT7 647 aa13.05□□□□□ -0.32
ABCA3-201ENST00000301732 TSSK1BQ9BXA7 367 aa13.05□□□□□ -0.32
ABCA3-201ENST00000301732 WDR11Q9BZH6 1224 aa13.05□□□□□ -0.32
ABCA3-201ENST00000301732 SEL1LQ9UBV2 794 aa13.05□□□□□ -0.32
ABCA3-201ENST00000301732 IRF1P10914 325 aa13.04□□□□□ -0.32
ABCA3-201ENST00000301732 STXBP2Q15833 593 aa13.04□□□□□ -0.32
ABCA3-201ENST00000301732 SLC30A9Q6PML9 568 aa13.04□□□□□ -0.32
ABCA3-201ENST00000301732 CACNA2D2Q9NY47 1150 aa13.04□□□□□ -0.32
ABCA3-201ENST00000301732 APOA1P02647 267 aa13.04□□□□□ -0.32
ABCA3-201ENST00000301732 BCAR1P56945 870 aa13.04□□□□□ -0.32
ABCA3-201ENST00000301732 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.04□□□□□ -0.32
ABCA3-201ENST00000301732 TRAPPC8Q9Y2L5 1435 aa13.04□□□□□ -0.32
ABCA3-201ENST00000301732 LZTS3O60299 673 aaPredicted RBP13.04□□□□□ -0.32
ABCA3-201ENST00000301732 IFNAR1P17181 557 aa13.04□□□□□ -0.32
ABCA3-201ENST00000301732 BRD2P25440 801 aaKnown RBP13.04□□□□□ -0.32
ABCA3-201ENST00000301732 GSSP48637 474 aa13.04□□□□□ -0.32
ABCA3-201ENST00000301732 ACOT2P49753 483 aa13.04□□□□□ -0.32
ABCA3-201ENST00000301732 TNFAIP1Q13829 316 aa13.04□□□□□ -0.32
ABCA3-201ENST00000301732 GPATCH4Q5T3I0 446 aaKnown RBP13.04□□□□□ -0.32
ABCA3-201ENST00000301732 RNF219Q5W0B1 726 aaPredicted RBP13.04□□□□□ -0.32
ABCA3-201ENST00000301732 ARHGEF25Q86VW2 580 aa13.04□□□□□ -0.32
ABCA3-201ENST00000301732 CHSY1Q86X52 802 aa13.04□□□□□ -0.32
ABCA3-201ENST00000301732 RAD54LQ92698 747 aa13.04□□□□□ -0.32
ABCA3-201ENST00000301732 CCT7Q99832 543 aa13.04□□□□□ -0.32
ABCA3-201ENST00000301732 ASPSCR1Q9BZE9 553 aa13.04□□□□□ -0.32
ABCA3-201ENST00000301732 SLC5A4Q9NY91 659 aa13.04□□□□□ -0.32
ABCA3-201ENST00000301732 B2RBV5 119 aa13.04□□□□□ -0.32
ABCA3-201ENST00000301732 HDAC4P56524 1084 aa13.04□□□□□ -0.32
ABCA3-201ENST00000301732 LRRC63Q05C16 580 aa13.04□□□□□ -0.32
ABCA3-201ENST00000301732 MED21Q13503 144 aa13.04□□□□□ -0.32
ABCA3-201ENST00000301732 TAF5Q15542 800 aa13.04□□□□□ -0.32
ABCA3-201ENST00000301732 CC2D2BQ6DHV5 1058 aa13.04□□□□□ -0.32
ABCA3-201ENST00000301732 FAM196AQ6ZSG2 479 aa13.04□□□□□ -0.32
ABCA3-201ENST00000301732 KAT2BQ92831 832 aa13.04□□□□□ -0.32
ABCA3-201ENST00000301732 SENP7Q9BQF6 1050 aa13.04□□□□□ -0.32
ABCA3-201ENST00000301732 EPN3Q9H201 632 aa13.04□□□□□ -0.32
ABCA3-201ENST00000301732 RNF14Q9UBS8 474 aa13.04□□□□□ -0.32
ABCA3-201ENST00000301732 SPDYE5A6NIY4 337 aa13.04□□□□□ -0.32
ABCA3-201ENST00000301732 ETFBP38117 255 aa13.04□□□□□ -0.32
ABCA3-201ENST00000301732 MAPRE1Q15691 268 aaKnown RBP13.04□□□□□ -0.32
ABCA3-201ENST00000301732 HLFQ16534 295 aa13.04□□□□□ -0.32
ABCA3-201ENST00000301732 KLHL38Q2WGJ6 581 aa13.04□□□□□ -0.32
ABCA3-201ENST00000301732 SPDYE7PQ495Y7 208 aa13.04□□□□□ -0.32
ABCA3-201ENST00000301732 SLC35G2Q8TBE7 412 aa13.04□□□□□ -0.32
ABCA3-201ENST00000301732 FAM49BQ9NUQ9 324 aa13.04□□□□□ -0.32
ABCA3-201ENST00000301732 ARIH2O95376 493 aa13.03□□□□□ -0.32
ABCA3-201ENST00000301732 PDGFRBP09619 1106 aa13.03□□□□□ -0.32
ABCA3-201ENST00000301732 IL10P22301 178 aa13.03□□□□□ -0.32
ABCA3-201ENST00000301732 SLC44A2Q8IWA5 706 aaPredicted RBP13.03□□□□□ -0.32
ABCA3-201ENST00000301732 SH3GL1Q99961 368 aa13.03□□□□□ -0.32
ABCA3-201ENST00000301732 SLC40A1Q9NP59 571 aa13.03□□□□□ -0.32
ABCA3-201ENST00000301732 STAP2Q9UGK3 403 aa13.03□□□□□ -0.32
ABCA3-201ENST00000301732 CAB39Q9Y376 341 aaPredicted RBP13.03□□□□□ -0.32
ABCA3-201ENST00000301732 LOC102724428A0A0B4J2F2 783 aa13.03□□□□□ -0.32
ABCA3-201ENST00000301732 ARHGAP10A1A4S6 786 aa13.03□□□□□ -0.32
ABCA3-201ENST00000301732 ANGPT2O15123 496 aa13.03□□□□□ -0.32
ABCA3-201ENST00000301732 XPOTO43592 962 aaKnown RBP13.03□□□□□ -0.32
ABCA3-201ENST00000301732 GPC3P51654 580 aa13.03□□□□□ -0.32
ABCA3-201ENST00000301732 SIK1P57059 783 aa13.03□□□□□ -0.32
ABCA3-201ENST00000301732 KIAA1755Q5JYT7 1200 aa13.03□□□□□ -0.32
ABCA3-201ENST00000301732 UNC13DQ70J99 1090 aa13.03□□□□□ -0.32
ABCA3-201ENST00000301732 ARMCX2Q7L311 632 aa13.03□□□□□ -0.32
ABCA3-201ENST00000301732 VN1R5Q7Z5H4 357 aa13.03□□□□□ -0.32
ABCA3-201ENST00000301732 ASNSD1Q9NWL6 643 aa13.03□□□□□ -0.32
ABCA3-201ENST00000301732 KCNG1Q9UIX4 513 aa13.03□□□□□ -0.32
ABCA3-201ENST00000301732 PNMA6FA0A0J9YX94 578 aa13.03□□□□□ -0.32
ABCA3-201ENST00000301732 NCF1BA6NI72 391 aaPredicted RBP13.03□□□□□ -0.32
ABCA3-201ENST00000301732 NCF1CA8MVU1 366 aaPredicted RBP13.03□□□□□ -0.32
ABCA3-201ENST00000301732 CCDC188H7C350 402 aa13.03□□□□□ -0.32
ABCA3-201ENST00000301732 NCF1P14598 390 aaPredicted RBP13.03□□□□□ -0.32
ABCA3-201ENST00000301732 DNAJC3Q13217 504 aa13.03□□□□□ -0.32
ABCA3-201ENST00000301732 KCTD21Q4G0X4 260 aa13.03□□□□□ -0.32
ABCA3-201ENST00000301732 PPP1R18Q6NYC8 613 aa13.03□□□□□ -0.32
ABCA3-201ENST00000301732 NOA1Q8NC60 698 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms