RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 COG2Q14746 738 aa11.63□□□□□ -0.55
ZNF558-201ENST00000301475 TRIP13Q15645 432 aaPredicted RBP11.63□□□□□ -0.55
ZNF558-201ENST00000301475 MUM1Q2TAK8 710 aa11.63□□□□□ -0.55
ZNF558-201ENST00000301475 RBM26Q5T8P6 1007 aaKnown RBP11.63□□□□□ -0.55
ZNF558-201ENST00000301475 RNF207Q6ZRF8 634 aa11.63□□□□□ -0.55
ZNF558-201ENST00000301475 KSR1Q8IVT5 923 aa11.63□□□□□ -0.55
ZNF558-201ENST00000301475 C12orf50Q8NA57 414 aaPredicted RBP11.63□□□□□ -0.55
ZNF558-201ENST00000301475 PAIP2Q9BPZ3 127 aaKnown RBP11.63□□□□□ -0.55
ZNF558-201ENST00000301475 JMJD4Q9H9V9 463 aa11.63□□□□□ -0.55
ZNF558-201ENST00000301475 EURLQ9NYK6 297 aa11.63□□□□□ -0.55
ZNF558-201ENST00000301475 WHRNQ9P202 907 aa11.63□□□□□ -0.55
ZNF558-201ENST00000301475 APEX2Q9UBZ4 518 aa11.63□□□□□ -0.55
ZNF558-201ENST00000301475 ASIC3Q9UHC3 531 aa11.63□□□□□ -0.55
ZNF558-201ENST00000301475 STARD13Q9Y3M8 1113 aa11.63□□□□□ -0.55
ZNF558-201ENST00000301475 USH1CQ9Y6N9 552 aa11.63□□□□□ -0.55
ZNF558-201ENST00000301475 NUMBLQ9Y6R0 609 aa11.63□□□□□ -0.55
ZNF558-201ENST00000301475 THAP12O43422 761 aa11.63□□□□□ -0.55
ZNF558-201ENST00000301475 ATP5HO75947 161 aa11.63□□□□□ -0.55
ZNF558-201ENST00000301475 SPATA31C1P0DKV0 1188 aa11.63□□□□□ -0.55
ZNF558-201ENST00000301475 KIF22Q14807 665 aa11.63□□□□□ -0.55
ZNF558-201ENST00000301475 WASHC2DQ5SRD0 308 aa11.63□□□□□ -0.55
ZNF558-201ENST00000301475 PHLDB3Q6NSJ2 640 aa11.63□□□□□ -0.55
ZNF558-201ENST00000301475 SYT2Q8N9I0 419 aaPredicted RBP11.63□□□□□ -0.55
ZNF558-201ENST00000301475 RBBP8NLQ8NC74 664 aaPredicted RBP11.63□□□□□ -0.55
ZNF558-201ENST00000301475 LINC00116Q8NCU8 138 aa11.63□□□□□ -0.55
ZNF558-201ENST00000301475 MIPEPQ99797 713 aa11.63□□□□□ -0.55
ZNF558-201ENST00000301475 AGPAT1Q99943 283 aa11.63□□□□□ -0.55
ZNF558-201ENST00000301475 LBHD1Q9BQE6 289 aaPredicted RBP11.63□□□□□ -0.55
ZNF558-201ENST00000301475 IRAK4Q9NWZ3 460 aa11.63□□□□□ -0.55
ZNF558-201ENST00000301475 GRID1Q9ULK0 1009 aa11.63□□□□□ -0.55
ZNF558-201ENST00000301475 PHTF1Q9UMS5 762 aa11.63□□□□□ -0.55
ZNF558-201ENST00000301475 SFI1A8K8P3 1242 aa11.62□□□□□ -0.55
ZNF558-201ENST00000301475 USP17L15C9J2P7 530 aa11.62□□□□□ -0.55
ZNF558-201ENST00000301475 USP17L13C9JLJ4 530 aa11.62□□□□□ -0.55
ZNF558-201ENST00000301475 USP17L11C9JVI0 530 aa11.62□□□□□ -0.55
ZNF558-201ENST00000301475 USP17L18D6R9N7 530 aa11.62□□□□□ -0.55
ZNF558-201ENST00000301475 USP17L22D6RA61 530 aa11.62□□□□□ -0.55
ZNF558-201ENST00000301475 USP17L17D6RBQ6 530 aa11.62□□□□□ -0.55
ZNF558-201ENST00000301475 USP17L19D6RCP7 530 aa11.62□□□□□ -0.55
ZNF558-201ENST00000301475 USP17L20D6RJB6 530 aa11.62□□□□□ -0.55
ZNF558-201ENST00000301475 NVLO15381 856 aaKnown RBP11.62□□□□□ -0.55
ZNF558-201ENST00000301475 CLDN3O15551 220 aa11.62□□□□□ -0.55
ZNF558-201ENST00000301475 RNF8O76064 485 aa11.62□□□□□ -0.55
ZNF558-201ENST00000301475 ASMTLO95671 621 aa11.62□□□□□ -0.55
ZNF558-201ENST00000301475 NOVP48745 357 aa11.62□□□□□ -0.55
ZNF558-201ENST00000301475 ITGA8P53708 1063 aa11.62□□□□□ -0.55
ZNF558-201ENST00000301475 USP17L24Q0WX57 530 aa11.62□□□□□ -0.55
ZNF558-201ENST00000301475 PDCD2Q16342 344 aaPredicted RBP11.62□□□□□ -0.55
ZNF558-201ENST00000301475 KHDC1Q4VXA5 237 aaKnown RBP11.62□□□□□ -0.55
ZNF558-201ENST00000301475 ARMC3Q5W041 872 aa11.62□□□□□ -0.55
ZNF558-201ENST00000301475 USP17L6PQ6QN14 398 aa11.62□□□□□ -0.55
ZNF558-201ENST00000301475 DRAXINQ8NBI3 349 aaPredicted RBP11.62□□□□□ -0.55
ZNF558-201ENST00000301475 NRG4Q8WWG1 115 aa11.62□□□□□ -0.55
ZNF558-201ENST00000301475 ATG4AQ8WYN0 398 aa11.62□□□□□ -0.55
ZNF558-201ENST00000301475 KIFAP3Q92845 792 aa11.62□□□□□ -0.55
ZNF558-201ENST00000301475 MTUS1Q9ULD2 1270 aa11.62□□□□□ -0.55
ZNF558-201ENST00000301475 MROH7Q68CQ1 1323 aa11.62□□□□□ -0.55
ZNF558-201ENST00000301475 IRS2Q9Y4H2 1338 aa11.62□□□□□ -0.55
ZNF558-201ENST00000301475 C10orf71Q711Q0 1435 aa11.62□□□□□ -0.55
ZNF558-201ENST00000301475 SPAG7O75391 227 aa11.62□□□□□ -0.55
ZNF558-201ENST00000301475 TCEA3O75764 348 aa11.62□□□□□ -0.55
ZNF558-201ENST00000301475 LAMB3Q13751 1172 aa11.62□□□□□ -0.55
ZNF558-201ENST00000301475 TTBK2Q6IQ55 1244 aa11.62□□□□□ -0.55
ZNF558-201ENST00000301475 IRGCQ6NXR0 463 aa11.62□□□□□ -0.55
ZNF558-201ENST00000301475 PPP1R21Q6ZMI0 780 aa11.62□□□□□ -0.55
ZNF558-201ENST00000301475 APLFQ8IW19 511 aaPredicted RBP11.62□□□□□ -0.55
ZNF558-201ENST00000301475 ADGRF4Q8IZF3 695 aa11.62□□□□□ -0.55
ZNF558-201ENST00000301475 C10orf82Q8WW14 230 aa11.62□□□□□ -0.55
ZNF558-201ENST00000301475 GJD4Q96KN9 370 aaPredicted RBP11.62□□□□□ -0.55
ZNF558-201ENST00000301475 EPAS1Q99814 870 aa11.62□□□□□ -0.55
ZNF558-201ENST00000301475 LRRC19Q9H756 370 aa11.62□□□□□ -0.55
ZNF558-201ENST00000301475 CHST7Q9NS84 486 aa11.62□□□□□ -0.55
ZNF558-201ENST00000301475 FAM47DPA6NHR8 397 aa11.62□□□□□ -0.55
ZNF558-201ENST00000301475 RASA4BC9J798 803 aa11.62□□□□□ -0.55
ZNF558-201ENST00000301475 RASA4O43374 803 aa11.62□□□□□ -0.55
ZNF558-201ENST00000301475 CDH16O75309 829 aa11.62□□□□□ -0.55
ZNF558-201ENST00000301475 PPP4CP60510 307 aa11.62□□□□□ -0.55
ZNF558-201ENST00000301475 IL9RQ01113 521 aa11.62□□□□□ -0.55
ZNF558-201ENST00000301475 RCN2Q14257 317 aa11.62□□□□□ -0.55
ZNF558-201ENST00000301475 TMED2Q15363 201 aa11.62□□□□□ -0.55
ZNF558-201ENST00000301475 TBC1D25Q3MII6 688 aa11.62□□□□□ -0.55
ZNF558-201ENST00000301475 PPP1R18Q6NYC8 613 aa11.62□□□□□ -0.55
ZNF558-201ENST00000301475 APBB1IPQ7Z5R6 666 aaPredicted RBP11.62□□□□□ -0.55
ZNF558-201ENST00000301475 RTFDC1Q9BY42 306 aaPredicted RBP11.62□□□□□ -0.55
ZNF558-201ENST00000301475 TRIM4Q9C037 500 aa11.62□□□□□ -0.55
ZNF558-201ENST00000301475 ZNF287Q9HBT7 754 aa11.62□□□□□ -0.55
ZNF558-201ENST00000301475 PCMTD2Q9NV79 361 aa11.62□□□□□ -0.55
ZNF558-201ENST00000301475 ATF5Q9Y2D1 282 aaPredicted RBP11.62□□□□□ -0.55
ZNF558-201ENST00000301475 SBF2Q86WG5 1849 aa11.61□□□□□ -0.55
ZNF558-201ENST00000301475 PNMA6FA0A0J9YX94 578 aa11.61□□□□□ -0.55
ZNF558-201ENST00000301475 MAPK13O15264 365 aa11.61□□□□□ -0.55
ZNF558-201ENST00000301475 PYGLP06737 847 aa11.61□□□□□ -0.55
ZNF558-201ENST00000301475 SNHG28P0DPA3 235 aa11.61□□□□□ -0.55
ZNF558-201ENST00000301475 PSMC2P35998 433 aaKnown RBP11.61□□□□□ -0.55
ZNF558-201ENST00000301475 SLC16A2P36021 539 aa11.61□□□□□ -0.55
ZNF558-201ENST00000301475 VPS41P49754 854 aa11.61□□□□□ -0.55
ZNF558-201ENST00000301475 POLE2P56282 527 aa11.61□□□□□ -0.55
ZNF558-201ENST00000301475 RPS8P62241 208 aaKnown RBP11.61□□□□□ -0.55
ZNF558-201ENST00000301475 GPC5P78333 572 aa11.61□□□□□ -0.55
ZNF558-201ENST00000301475 CYP4A11Q02928 519 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms