RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 ADAM30Q9UKF2 790 aa11.9□□□□□ -0.5
GCN1-201ENST00000300648 FARP1Q9Y4F1 1045 aaPredicted RBP11.9□□□□□ -0.5
GCN1-201ENST00000300648 SAC3D1A6NKF1 404 aa11.9□□□□□ -0.5
GCN1-201ENST00000300648 PHF2O75151 1096 aa11.9□□□□□ -0.5
GCN1-201ENST00000300648 ATP5BP06576 529 aaKnown RBP11.9□□□□□ -0.5
GCN1-201ENST00000300648 STAG2Q8N3U4 1231 aa11.9□□□□□ -0.5
GCN1-201ENST00000300648 CDC26Q8NHZ8 85 aa11.9□□□□□ -0.5
GCN1-201ENST00000300648 RAPGEF5Q92565 580 aa11.9□□□□□ -0.5
GCN1-201ENST00000300648 PRRG3Q9BZD7 231 aa11.9□□□□□ -0.5
GCN1-201ENST00000300648 ERVK-7P63135 1459 aa11.9□□□□□ -0.5
GCN1-201ENST00000300648 C5orf58C9J3I9 102 aa11.9□□□□□ -0.5
GCN1-201ENST00000300648 ASNSP08243 561 aa11.9□□□□□ -0.5
GCN1-201ENST00000300648 ZNF18P17022 549 aa11.9□□□□□ -0.5
GCN1-201ENST00000300648 SERPINB3P29508 390 aa11.9□□□□□ -0.5
GCN1-201ENST00000300648 BCAR1P56945 870 aa11.9□□□□□ -0.5
GCN1-201ENST00000300648 PRAMEP78395 509 aa11.9□□□□□ -0.5
GCN1-201ENST00000300648 TSPY1Q01534 308 aa11.9□□□□□ -0.5
GCN1-201ENST00000300648 PDIA2Q13087 525 aaKnown RBP11.9□□□□□ -0.5
GCN1-201ENST00000300648 MXD4Q14582 209 aaPredicted RBP11.9□□□□□ -0.5
GCN1-201ENST00000300648 CCDC85BQ15834 202 aaPredicted RBP11.9□□□□□ -0.5
GCN1-201ENST00000300648 AARS2Q5JTZ9 985 aaKnown RBP11.9□□□□□ -0.5
GCN1-201ENST00000300648 GPIHBP1Q8IV16 184 aa11.9□□□□□ -0.5
GCN1-201ENST00000300648 OSBPL8Q9BZF1 889 aa11.9□□□□□ -0.5
GCN1-201ENST00000300648 CDYLQ9Y232 598 aa11.9□□□□□ -0.5
GCN1-201ENST00000300648 NPHP4O75161 1426 aaPredicted RBP11.9□□□□□ -0.5
GCN1-201ENST00000300648 TMEM191CA6NGB0 347 aa11.9□□□□□ -0.5
GCN1-201ENST00000300648 KRT76Q01546 638 aa11.9□□□□□ -0.5
GCN1-201ENST00000300648 C1orf228Q6PIY5 440 aa11.9□□□□□ -0.5
GCN1-201ENST00000300648 TRMT2AQ8IZ69 625 aaKnown RBP11.9□□□□□ -0.5
GCN1-201ENST00000300648 PPHLN1Q8NEY8 458 aaKnown RBP11.9□□□□□ -0.5
GCN1-201ENST00000300648 SIKE1Q9BRV8 207 aa11.9□□□□□ -0.5
GCN1-201ENST00000300648 LRFN2Q9ULH4 789 aa11.9□□□□□ -0.5
GCN1-201ENST00000300648 SNX12Q9UMY4 172 aa11.9□□□□□ -0.5
GCN1-201ENST00000300648 TRPC5OSA6NMA1 111 aa11.9□□□□□ -0.51
GCN1-201ENST00000300648 KRT14P02533 472 aa11.9□□□□□ -0.51
GCN1-201ENST00000300648 SLC10A5Q5PT55 438 aa11.9□□□□□ -0.51
GCN1-201ENST00000300648 FTOQ9C0B1 505 aaKnown RBP eCLIP11.9□□□□□ -0.51
GCN1-201ENST00000300648 SLC4A7Q9Y6M7 1214 aa11.9□□□□□ -0.51
GCN1-201ENST00000300648 KNOP1Q1ED39 458 aaKnown RBP11.89□□□□□ -0.51
GCN1-201ENST00000300648 TK2O00142 265 aa11.89□□□□□ -0.51
GCN1-201ENST00000300648 ORC4O43929 436 aa11.89□□□□□ -0.51
GCN1-201ENST00000300648 RWDD4Q6NW29 188 aaKnown RBP11.89□□□□□ -0.51
GCN1-201ENST00000300648 TAB3Q8N5C8 712 aaPredicted RBP11.89□□□□□ -0.51
GCN1-201ENST00000300648 CCNYL1Q8N7R7 359 aa11.89□□□□□ -0.51
GCN1-201ENST00000300648 RTN2O75298 545 aa11.89□□□□□ -0.51
GCN1-201ENST00000300648 NNMTP40261 264 aa11.89□□□□□ -0.51
GCN1-201ENST00000300648 RAD51Q06609 339 aa11.89□□□□□ -0.51
GCN1-201ENST00000300648 KCNV1Q6PIU1 500 aa11.89□□□□□ -0.51
GCN1-201ENST00000300648 PASD1Q8IV76 773 aa11.89□□□□□ -0.51
GCN1-201ENST00000300648 MFN1Q8IWA4 741 aa11.89□□□□□ -0.51
GCN1-201ENST00000300648 NGRNQ9NPE2 291 aaKnown RBP11.89□□□□□ -0.51
GCN1-201ENST00000300648 O00370 1275 aa11.89□□□□□ -0.51
GCN1-201ENST00000300648 IREB2P48200 963 aaKnown RBP11.89□□□□□ -0.51
GCN1-201ENST00000300648 MMP14P50281 582 aa11.89□□□□□ -0.51
GCN1-201ENST00000300648 HSD17B4P51659 736 aa11.89□□□□□ -0.51
GCN1-201ENST00000300648 LOC102724428A0A0B4J2F2 783 aa11.89□□□□□ -0.51
GCN1-201ENST00000300648 CLDN3O15551 220 aa11.89□□□□□ -0.51
GCN1-201ENST00000300648 SIK1P57059 783 aa11.89□□□□□ -0.51
GCN1-201ENST00000300648 KCNA1Q09470 495 aa11.89□□□□□ -0.51
GCN1-201ENST00000300648 KCNH2Q12809 1159 aa11.89□□□□□ -0.51
GCN1-201ENST00000300648 DNAJC10Q8IXB1 793 aa11.89□□□□□ -0.51
GCN1-201ENST00000300648 PPM1NQ8N819 430 aa11.89□□□□□ -0.51
GCN1-201ENST00000300648 CCT7Q99832 543 aa11.89□□□□□ -0.51
GCN1-201ENST00000300648 NXF1Q9UBU9 619 aaKnown RBP11.89□□□□□ -0.51
GCN1-201ENST00000300648 MAD2L2Q9UI95 211 aa11.89□□□□□ -0.51
GCN1-201ENST00000300648 AURKCQ9UQB9 309 aa11.89□□□□□ -0.51
GCN1-201ENST00000300648 GTF2IP78347 998 aa11.89□□□□□ -0.51
GCN1-201ENST00000300648 CHRNDQ07001 517 aa11.89□□□□□ -0.51
GCN1-201ENST00000300648 ELMOD1Q8N336 334 aa11.89□□□□□ -0.51
GCN1-201ENST00000300648 CCDC126Q96EE4 140 aa11.89□□□□□ -0.51
GCN1-201ENST00000300648 RNPC3Q96LT9 517 aaKnown RBP11.89□□□□□ -0.51
GCN1-201ENST00000300648 FANCEQ9HB96 536 aa11.89□□□□□ -0.51
GCN1-201ENST00000300648 LSP1P33241 339 aa11.89□□□□□ -0.51
GCN1-201ENST00000300648 LBRQ14739 615 aaKnown RBP11.89□□□□□ -0.51
GCN1-201ENST00000300648 PKN2Q16513 984 aaKnown RBP11.89□□□□□ -0.51
GCN1-201ENST00000300648 LVRNQ6Q4G3 990 aa11.89□□□□□ -0.51
GCN1-201ENST00000300648 FBXL5Q9UKA1 691 aa11.89□□□□□ -0.51
GCN1-201ENST00000300648 ARIH2O95376 493 aa11.88□□□□□ -0.51
GCN1-201ENST00000300648 FASTKD1Q53R41 847 aaKnown RBP11.88□□□□□ -0.51
GCN1-201ENST00000300648 IZUMO3Q5VZ72 239 aa11.88□□□□□ -0.51
GCN1-201ENST00000300648 RASGRP2Q7LDG7 609 aa11.88□□□□□ -0.51
GCN1-201ENST00000300648 CLEC4FQ8N1N0 589 aa11.88□□□□□ -0.51
GCN1-201ENST00000300648 ZNF473Q8WTR7 871 aaKnown RBP11.88□□□□□ -0.51
GCN1-201ENST00000300648 CCT8L1PA6NM43 557 aa11.88□□□□□ -0.51
GCN1-201ENST00000300648 ZSCAN9O15535 394 aaPredicted RBP11.88□□□□□ -0.51
GCN1-201ENST00000300648 ARMCX4Q5H9R4 360 aa11.88□□□□□ -0.51
GCN1-201ENST00000300648 PLEKHA8Q96JA3 519 aa11.88□□□□□ -0.51
GCN1-201ENST00000300648 VPS50Q96JG6 964 aa11.88□□□□□ -0.51
GCN1-201ENST00000300648 HUS1O60921 280 aa11.88□□□□□ -0.51
GCN1-201ENST00000300648 WBP4O75554 376 aaKnown RBP11.88□□□□□ -0.51
GCN1-201ENST00000300648 FBLN1P23142 703 aa11.88□□□□□ -0.51
GCN1-201ENST00000300648 RBBP7Q16576 425 aa11.88□□□□□ -0.51
GCN1-201ENST00000300648 ANO4Q32M45 955 aa11.88□□□□□ -0.51
GCN1-201ENST00000300648 MAGED4Q96JG8 741 aa11.88□□□□□ -0.51
GCN1-201ENST00000300648 OVOS2A0A0G2JMS6 1433 aa11.88□□□□□ -0.51
GCN1-201ENST00000300648 OVOS2A0A0J9YW53 1432 aa11.88□□□□□ -0.51
GCN1-201ENST00000300648 OVOS2Q6IE36 1432 aa11.88□□□□□ -0.51
GCN1-201ENST00000300648 TCF3P15923 654 aa11.88□□□□□ -0.51
GCN1-201ENST00000300648 MTFR1Q15390 333 aa11.88□□□□□ -0.51
GCN1-201ENST00000300648 ACBD5Q5T8D3 534 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms