RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 RPS6KA4O75676 772 aa14.36□□□□□ -0.11
CHRFAM7A-201ENST00000299847 UPP2O95045 317 aa14.36□□□□□ -0.11
CHRFAM7A-201ENST00000299847 PDGFRBP09619 1106 aa14.36□□□□□ -0.11
CHRFAM7A-201ENST00000299847 KRT39Q6A163 491 aa14.36□□□□□ -0.11
CHRFAM7A-201ENST00000299847 WDR24Q96S15 920 aa14.36□□□□□ -0.11
CHRFAM7A-201ENST00000299847 YY1AP1Q9H869 796 aa14.36□□□□□ -0.11
CHRFAM7A-201ENST00000299847 ANKARQ7Z5J8 1434 aa14.36□□□□□ -0.11
CHRFAM7A-201ENST00000299847 LMNAP02545 664 aaKnown RBP14.36□□□□□ -0.11
CHRFAM7A-201ENST00000299847 OCM2P0CE71 109 aa14.36□□□□□ -0.11
CHRFAM7A-201ENST00000299847 OCMP0CE72 109 aaPredicted RBP14.36□□□□□ -0.11
CHRFAM7A-201ENST00000299847 CHRNA3P32297 505 aa14.36□□□□□ -0.11
CHRFAM7A-201ENST00000299847 B4GALNT2Q8NHY0 566 aa14.36□□□□□ -0.11
CHRFAM7A-201ENST00000299847 DTX3LQ8TDB6 740 aa14.36□□□□□ -0.11
CHRFAM7A-201ENST00000299847 TAF1DQ9H5J8 278 aaPredicted RBP14.36□□□□□ -0.11
CHRFAM7A-201ENST00000299847 SNX5Q9Y5X3 404 aa14.36□□□□□ -0.11
CHRFAM7A-201ENST00000299847 PJA2O43164 708 aa14.35□□□□□ -0.11
CHRFAM7A-201ENST00000299847 KRT76Q01546 638 aa14.35□□□□□ -0.11
CHRFAM7A-201ENST00000299847 CYTH1Q15438 398 aa14.35□□□□□ -0.11
CHRFAM7A-201ENST00000299847 TERF2Q15554 542 aa14.35□□□□□ -0.11
CHRFAM7A-201ENST00000299847 TADA2BQ86TJ2 420 aa14.35□□□□□ -0.11
CHRFAM7A-201ENST00000299847 WDR48Q8TAF3 677 aa14.35□□□□□ -0.11
CHRFAM7A-201ENST00000299847 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.35□□□□□ -0.11
CHRFAM7A-201ENST00000299847 STK36Q9NRP7 1315 aa14.35□□□□□ -0.11
CHRFAM7A-201ENST00000299847 TCP11X1B4DZS4 312 aa14.35□□□□□ -0.11
CHRFAM7A-201ENST00000299847 ATP6V1E1P36543 226 aa14.35□□□□□ -0.11
CHRFAM7A-201ENST00000299847 PDXDC1Q6P996 788 aa14.35□□□□□ -0.11
CHRFAM7A-201ENST00000299847 SARM1Q6SZW1 724 aa14.35□□□□□ -0.11
CHRFAM7A-201ENST00000299847 AGPAT1Q99943 283 aa14.35□□□□□ -0.11
CHRFAM7A-201ENST00000299847 AIPL1Q9NZN9 384 aa14.35□□□□□ -0.11
CHRFAM7A-201ENST00000299847 STX18Q9P2W9 335 aaKnown RBP14.35□□□□□ -0.11
CHRFAM7A-201ENST00000299847 MYO1CO00159 1063 aa14.35□□□□□ -0.11
CHRFAM7A-201ENST00000299847 PYGBP11216 843 aa14.35□□□□□ -0.11
CHRFAM7A-201ENST00000299847 TBXAS1P24557 533 aaPredicted RBP14.35□□□□□ -0.11
CHRFAM7A-201ENST00000299847 KIZQ2M2Z5 673 aa14.35□□□□□ -0.11
CHRFAM7A-201ENST00000299847 SH2D3CQ8N5H7 860 aa14.35□□□□□ -0.11
CHRFAM7A-201ENST00000299847 ZNF579Q8NAF0 562 aaKnown RBP14.35□□□□□ -0.11
CHRFAM7A-201ENST00000299847 ADGRG1Q9Y653 693 aa14.35□□□□□ -0.11
CHRFAM7A-201ENST00000299847 KIAA1586Q9HCI6 787 aa14.35□□□□□ -0.11
CHRFAM7A-201ENST00000299847 PARVAQ9NVD7 372 aa14.35□□□□□ -0.11
CHRFAM7A-201ENST00000299847 CEP170Q5SW79 1584 aa14.35□□□□□ -0.11
CHRFAM7A-201ENST00000299847 RHOT1Q8IXI2 618 aa14.35□□□□□ -0.11
CHRFAM7A-201ENST00000299847 OR6J1Q8NGC5 347 aa14.35□□□□□ -0.11
CHRFAM7A-201ENST00000299847 OR2W6PQ8NHA6 318 aa14.35□□□□□ -0.11
CHRFAM7A-201ENST00000299847 GCOM2Q9BZD3 368 aaPredicted RBP14.35□□□□□ -0.11
CHRFAM7A-201ENST00000299847 CLCA2Q9UQC9 943 aa14.35□□□□□ -0.11
CHRFAM7A-201ENST00000299847 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.35□□□□□ -0.11
CHRFAM7A-201ENST00000299847 AP2B1P63010 937 aa14.34□□□□□ -0.11
CHRFAM7A-201ENST00000299847 ZBTB17Q13105 803 aa14.34□□□□□ -0.11
CHRFAM7A-201ENST00000299847 ZNF235Q14590 738 aa14.34□□□□□ -0.11
CHRFAM7A-201ENST00000299847 P3H1Q32P28 736 aa14.34□□□□□ -0.11
CHRFAM7A-201ENST00000299847 FAM117BQ6P1L5 589 aa14.34□□□□□ -0.11
CHRFAM7A-201ENST00000299847 NPHS2Q9NP85 383 aa14.34□□□□□ -0.11
CHRFAM7A-201ENST00000299847 SUPT3HO75486 399 aa14.34□□□□□ -0.11
CHRFAM7A-201ENST00000299847 TMA16Q96EY4 203 aaKnown RBP14.34□□□□□ -0.11
CHRFAM7A-201ENST00000299847 ELMO2Q96JJ3 720 aa14.34□□□□□ -0.11
CHRFAM7A-201ENST00000299847 CHP1Q99653 195 aa14.34□□□□□ -0.11
CHRFAM7A-201ENST00000299847 WNT8AQ9H1J5 351 aa14.34□□□□□ -0.11
CHRFAM7A-201ENST00000299847 STAP1Q9ULZ2 295 aa14.34□□□□□ -0.11
CHRFAM7A-201ENST00000299847 ARHGAP26Q9UNA1 814 aa14.34□□□□□ -0.11
CHRFAM7A-201ENST00000299847 F8W8V4 182 aa14.34□□□□□ -0.11
CHRFAM7A-201ENST00000299847 ASMTLO95671 621 aa14.34□□□□□ -0.11
CHRFAM7A-201ENST00000299847 SPDYAQ5MJ70 313 aa14.34□□□□□ -0.11
CHRFAM7A-201ENST00000299847 PLEKHA5Q9HAU0 1116 aa14.34□□□□□ -0.11
CHRFAM7A-201ENST00000299847 OCA2Q04671 838 aa14.34□□□□□ -0.11
CHRFAM7A-201ENST00000299847 IL31Q6EBC2 164 aa14.34□□□□□ -0.11
CHRFAM7A-201ENST00000299847 SLC25A41Q8N5S1 370 aa14.34□□□□□ -0.11
CHRFAM7A-201ENST00000299847 SLC35G2Q8TBE7 412 aa14.34□□□□□ -0.11
CHRFAM7A-201ENST00000299847 ACSF2Q96CM8 615 aaPredicted RBP14.34□□□□□ -0.11
CHRFAM7A-201ENST00000299847 MCEEQ96PE7 176 aa14.34□□□□□ -0.11
CHRFAM7A-201ENST00000299847 EIF2AQ9BY44 585 aaKnown RBP14.34□□□□□ -0.11
CHRFAM7A-201ENST00000299847 SEL1LQ9UBV2 794 aa14.34□□□□□ -0.11
CHRFAM7A-201ENST00000299847 CDC42BPGQ6DT37 1551 aa14.34□□□□□ -0.11
CHRFAM7A-201ENST00000299847 HAUS6Q7Z4H7 955 aa14.34□□□□□ -0.11
CHRFAM7A-201ENST00000299847 LDHDQ86WU2 507 aa14.34□□□□□ -0.11
CHRFAM7A-201ENST00000299847 CDKL3Q8IVW4 592 aaPredicted RBP14.34□□□□□ -0.11
CHRFAM7A-201ENST00000299847 FAM20AQ96MK3 541 aa14.34□□□□□ -0.11
CHRFAM7A-201ENST00000299847 TMEM117Q9H0C3 514 aa14.34□□□□□ -0.11
CHRFAM7A-201ENST00000299847 PTCH1Q13635 1447 aa14.33□□□□□ -0.11
CHRFAM7A-201ENST00000299847 NNMTP40261 264 aa14.33□□□□□ -0.11
CHRFAM7A-201ENST00000299847 PMS1P54277 932 aaKnown RBP14.33□□□□□ -0.11
CHRFAM7A-201ENST00000299847 ICA1LQ8NDH6 482 aa14.33□□□□□ -0.11
CHRFAM7A-201ENST00000299847 SEPT8Q92599 483 aa14.33□□□□□ -0.11
CHRFAM7A-201ENST00000299847 ATP6V1G3Q96LB4 118 aa14.33□□□□□ -0.11
CHRFAM7A-201ENST00000299847 RNPC3Q96LT9 517 aaKnown RBP14.33□□□□□ -0.11
CHRFAM7A-201ENST00000299847 SMAD5Q99717 465 aaKnown RBP14.33□□□□□ -0.11
CHRFAM7A-201ENST00000299847 HSPBP1Q9NZL4 362 aa14.33□□□□□ -0.11
CHRFAM7A-201ENST00000299847 TFR2Q9UP52 801 aa14.33□□□□□ -0.11
CHRFAM7A-201ENST00000299847 TMCC1O94876 653 aa14.33□□□□□ -0.12
CHRFAM7A-201ENST00000299847 PRKCBP05771 671 aa14.33□□□□□ -0.12
CHRFAM7A-201ENST00000299847 TCN1P20061 433 aaPredicted RBP14.33□□□□□ -0.12
CHRFAM7A-201ENST00000299847 SCP2P22307 547 aa14.33□□□□□ -0.12
CHRFAM7A-201ENST00000299847 TPI1P60174 286 aa14.33□□□□□ -0.12
CHRFAM7A-201ENST00000299847 FOXO4P98177 505 aa14.33□□□□□ -0.12
CHRFAM7A-201ENST00000299847 FMR1Q06787 632 aaKnown RBP eCLIP14.33□□□□□ -0.12
CHRFAM7A-201ENST00000299847 PLA2G4FQ68DD2 849 aa14.33□□□□□ -0.12
CHRFAM7A-201ENST00000299847 STOX1Q6ZVD7 989 aa14.33□□□□□ -0.12
CHRFAM7A-201ENST00000299847 PARP9Q8IXQ6 854 aa14.33□□□□□ -0.12
CHRFAM7A-201ENST00000299847 DDX56Q9NY93 547 aaKnown RBP14.33□□□□□ -0.12
CHRFAM7A-201ENST00000299847 ADGRA2Q96PE1 1338 aa14.33□□□□□ -0.12
CHRFAM7A-201ENST00000299847 ADNPQ9H2P0 1102 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms