RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 TROVE2P10155 538 aaKnown RBP eCLIP12.17□□□□□ -0.46
TRUB1-201ENST00000298746 ITIH2P19823 946 aa12.17□□□□□ -0.46
TRUB1-201ENST00000298746 POLGP54098 1239 aaPredicted RBP12.17□□□□□ -0.46
TRUB1-201ENST00000298746 OVGP1Q12889 678 aa12.17□□□□□ -0.46
TRUB1-201ENST00000298746 MTM1Q13496 603 aa12.17□□□□□ -0.46
TRUB1-201ENST00000298746 C2CD6Q53TS8 623 aa12.17□□□□□ -0.46
TRUB1-201ENST00000298746 PDCD7Q8N8D1 485 aaKnown RBP12.17□□□□□ -0.46
TRUB1-201ENST00000298746 ART4Q93070 314 aa12.17□□□□□ -0.46
TRUB1-201ENST00000298746 CCDC134Q9H6E4 229 aa12.17□□□□□ -0.46
TRUB1-201ENST00000298746 CHST7Q9NS84 486 aa12.17□□□□□ -0.46
TRUB1-201ENST00000298746 NCANO14594 1321 aa12.17□□□□□ -0.46
TRUB1-201ENST00000298746 FAM196BA6NMK8 535 aa12.17□□□□□ -0.46
TRUB1-201ENST00000298746 GGPS1O95749 300 aa12.17□□□□□ -0.46
TRUB1-201ENST00000298746 PECAM1P16284 738 aaPredicted RBP12.17□□□□□ -0.46
TRUB1-201ENST00000298746 TAL1P17542 331 aaPredicted RBP12.17□□□□□ -0.46
TRUB1-201ENST00000298746 RPA1P27694 616 aa12.17□□□□□ -0.46
TRUB1-201ENST00000298746 CETN2P41208 172 aa12.17□□□□□ -0.46
TRUB1-201ENST00000298746 PEX5P50542 639 aa12.17□□□□□ -0.46
TRUB1-201ENST00000298746 RCN1Q15293 331 aa12.17□□□□□ -0.46
TRUB1-201ENST00000298746 RNF220Q5VTB9 566 aa12.17□□□□□ -0.46
TRUB1-201ENST00000298746 PHLDB3Q6NSJ2 640 aa12.17□□□□□ -0.46
TRUB1-201ENST00000298746 FBXO41Q8TF61 875 aa12.17□□□□□ -0.46
TRUB1-201ENST00000298746 GRK7Q8WTQ7 553 aa12.17□□□□□ -0.46
TRUB1-201ENST00000298746 EIF2AK1Q9BQI3 630 aaKnown RBP12.17□□□□□ -0.46
TRUB1-201ENST00000298746 TRABDQ9H4I3 376 aa12.17□□□□□ -0.46
TRUB1-201ENST00000298746 CYP39A1Q9NYL5 469 aa12.17□□□□□ -0.46
TRUB1-201ENST00000298746 SLAIN2Q9P270 581 aa12.17□□□□□ -0.46
TRUB1-201ENST00000298746 ARHGEF35A5YM69 484 aa12.16□□□□□ -0.46
TRUB1-201ENST00000298746 GYG2O15488 501 aa12.16□□□□□ -0.46
TRUB1-201ENST00000298746 PPP1R11O60927 126 aaPredicted RBP12.16□□□□□ -0.46
TRUB1-201ENST00000298746 GJB6O95452 261 aa12.16□□□□□ -0.46
TRUB1-201ENST00000298746 SGPL1O95470 568 aa12.16□□□□□ -0.46
TRUB1-201ENST00000298746 GAP43P17677 238 aa12.16□□□□□ -0.46
TRUB1-201ENST00000298746 HOXD13P35453 343 aa12.16□□□□□ -0.46
TRUB1-201ENST00000298746 RBM5P52756 815 aaKnown RBP eCLIP12.16□□□□□ -0.46
TRUB1-201ENST00000298746 NFIXQ14938 502 aa12.16□□□□□ -0.46
TRUB1-201ENST00000298746 GALNTL6Q49A17 601 aa12.16□□□□□ -0.46
TRUB1-201ENST00000298746 TAF1BQ53T94 588 aaPredicted RBP12.16□□□□□ -0.46
TRUB1-201ENST00000298746 GPATCH4Q5T3I0 446 aaKnown RBP12.16□□□□□ -0.46
TRUB1-201ENST00000298746 IZUMO3Q5VZ72 239 aa12.16□□□□□ -0.46
TRUB1-201ENST00000298746 CDCA2Q69YH5 1023 aaPredicted RBP12.16□□□□□ -0.46
TRUB1-201ENST00000298746 SUPT20HQ8NEM7 779 aa12.16□□□□□ -0.46
TRUB1-201ENST00000298746 CYP2W1Q8TAV3 490 aa12.16□□□□□ -0.46
TRUB1-201ENST00000298746 KAT5Q92993 513 aa12.16□□□□□ -0.46
TRUB1-201ENST00000298746 FGD4Q96M96 766 aa12.16□□□□□ -0.46
TRUB1-201ENST00000298746 MOV10L1Q9BXT6 1211 aaKnown RBP12.16□□□□□ -0.46
TRUB1-201ENST00000298746 ZNF148Q9UQR1 794 aa12.16□□□□□ -0.46
TRUB1-201ENST00000298746 BCL9O00512 1426 aa12.16□□□□□ -0.46
TRUB1-201ENST00000298746 GOLGA8RI6L899 631 aa12.16□□□□□ -0.46
TRUB1-201ENST00000298746 CFBP00751 764 aa12.16□□□□□ -0.46
TRUB1-201ENST00000298746 SLURP2P0DP57 97 aa12.16□□□□□ -0.46
TRUB1-201ENST00000298746 PLS3P13797 630 aa12.16□□□□□ -0.46
TRUB1-201ENST00000298746 ATF7P17544 494 aaPredicted RBP12.16□□□□□ -0.46
TRUB1-201ENST00000298746 SMARCA1P28370 1054 aa12.16□□□□□ -0.46
TRUB1-201ENST00000298746 HSPA2P54652 639 aa12.16□□□□□ -0.46
TRUB1-201ENST00000298746 ICA1Q05084 483 aa12.16□□□□□ -0.46
TRUB1-201ENST00000298746 TCP10Q12799 353 aa12.16□□□□□ -0.46
TRUB1-201ENST00000298746 EPC2Q52LR7 807 aa12.16□□□□□ -0.46
TRUB1-201ENST00000298746 ANO7Q6IWH7 933 aa12.16□□□□□ -0.46
TRUB1-201ENST00000298746 MFSD5Q6N075 450 aa12.16□□□□□ -0.46
TRUB1-201ENST00000298746 RBM15Q96T37 977 aaKnown RBP eCLIP12.16□□□□□ -0.46
TRUB1-201ENST00000298746 NINJ2Q9NZG7 142 aa12.16□□□□□ -0.46
TRUB1-201ENST00000298746 TCEAL9Q9UHQ7 104 aa12.16□□□□□ -0.46
TRUB1-201ENST00000298746 SERPINB13Q9UIV8 391 aa12.16□□□□□ -0.46
TRUB1-201ENST00000298746 GOLGA8SH3BPF8 625 aa12.15□□□□□ -0.46
TRUB1-201ENST00000298746 GOLGA8MH3BSY2 632 aa12.15□□□□□ -0.46
TRUB1-201ENST00000298746 HLA-DOAP06340 250 aa12.15□□□□□ -0.46
TRUB1-201ENST00000298746 TAC1P20366 129 aa12.15□□□□□ -0.46
TRUB1-201ENST00000298746 KCNA3P22001 575 aa12.15□□□□□ -0.46
TRUB1-201ENST00000298746 MARK3P27448 753 aa12.15□□□□□ -0.46
TRUB1-201ENST00000298746 FOXN2P32314 431 aa12.15□□□□□ -0.46
TRUB1-201ENST00000298746 GTF2IP78347 998 aa12.15□□□□□ -0.46
TRUB1-201ENST00000298746 CCDC62Q6P9F0 684 aa12.15□□□□□ -0.46
TRUB1-201ENST00000298746 MTDHQ86UE4 582 aaKnown RBP12.15□□□□□ -0.46
TRUB1-201ENST00000298746 ZDHHC14Q8IZN3 488 aa12.15□□□□□ -0.46
TRUB1-201ENST00000298746 SLC5A5Q92911 643 aa12.15□□□□□ -0.46
TRUB1-201ENST00000298746 CYTH2Q99418 400 aa12.15□□□□□ -0.46
TRUB1-201ENST00000298746 TRAIPQ9BWF2 469 aa12.15□□□□□ -0.46
TRUB1-201ENST00000298746 PIDD1Q9HB75 910 aa12.15□□□□□ -0.46
TRUB1-201ENST00000298746 MYO3BQ8WXR4 1341 aa12.15□□□□□ -0.46
TRUB1-201ENST00000298746 TGFB1I1O43294 461 aa12.15□□□□□ -0.46
TRUB1-201ENST00000298746 EDIL3O43854 480 aa12.15□□□□□ -0.46
TRUB1-201ENST00000298746 UBTFL6P0CB48 400 aaPredicted RBP12.15□□□□□ -0.46
TRUB1-201ENST00000298746 ALADP13716 330 aa12.15□□□□□ -0.46
TRUB1-201ENST00000298746 RANBP1P43487 201 aa12.15□□□□□ -0.46
TRUB1-201ENST00000298746 BFSP1Q12934 665 aa12.15□□□□□ -0.46
TRUB1-201ENST00000298746 ARMC3Q5W041 872 aa12.15□□□□□ -0.46
TRUB1-201ENST00000298746 RINT1Q6NUQ1 792 aa12.15□□□□□ -0.46
TRUB1-201ENST00000298746 DYDC2Q96IM9 177 aa12.15□□□□□ -0.46
TRUB1-201ENST00000298746 KLF6Q99612 283 aaPredicted RBP12.15□□□□□ -0.46
TRUB1-201ENST00000298746 SH2D3AQ9BRG2 576 aa12.15□□□□□ -0.46
TRUB1-201ENST00000298746 KIF13AQ9H1H9 1805 aa12.15□□□□□ -0.46
TRUB1-201ENST00000298746 GTPBP10A4D1E9 387 aaKnown RBP12.15□□□□□ -0.46
TRUB1-201ENST00000298746 CAPN9O14815 690 aa12.15□□□□□ -0.46
TRUB1-201ENST00000298746 ATP2A1O14983 1001 aa12.15□□□□□ -0.46
TRUB1-201ENST00000298746 ATP6V1C1P21283 382 aa12.15□□□□□ -0.46
TRUB1-201ENST00000298746 CTNNA2P26232 953 aa12.15□□□□□ -0.46
TRUB1-201ENST00000298746 SERPINB4P48594 390 aa12.15□□□□□ -0.46
TRUB1-201ENST00000298746 NT5C2P49902 561 aa12.15□□□□□ -0.46
TRUB1-201ENST00000298746 MXI1P50539 228 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms