RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 MIIPQ5JXC2 388 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 CDCA2Q69YH5 1023 aaPredicted RBP7.18□□□□□ -1.26
TMC1-201ENST00000297784 IQSEC1Q6DN90 963 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 WDR59Q6PJI9 974 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 FOXR2Q6PJQ5 311 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 OTUD6AQ7L8S5 288 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 KIAA1328Q86T90 577 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 CSGALNACT2Q8N6G5 542 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 CCDC155Q8N6L0 562 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 CYFIP2Q96F07 1278 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 ATP6V1G3Q96LB4 118 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 APBA2Q99767 749 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 KIFC3Q9BVG8 833 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 EBF2Q9HAK2 575 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 GDF3Q9NR23 364 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 TCEAL9Q9UHQ7 104 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 TRAF3IP3Q9Y228 551 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 TRIP12Q14669 1992 aaPredicted RBP7.18□□□□□ -1.26
TMC1-201ENST00000297784 LAMA3Q16787 3333 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 KCNJ18B7U540 433 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 ZNF185O15231 689 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 DGAT1O75907 488 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 GCNT3O95395 438 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 LGALS2P05162 132 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 ZNF286BP0CG31 522 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 XRCC5P13010 732 aaKnown RBP7.18□□□□□ -1.26
TMC1-201ENST00000297784 GAP43P17677 238 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 TCP1P17987 556 aaKnown RBP7.18□□□□□ -1.26
TMC1-201ENST00000297784 RGS2P41220 211 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 FLT3LGP49771 235 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 CCNHP51946 323 aaPredicted RBP7.18□□□□□ -1.26
TMC1-201ENST00000297784 NCKAP1LP55160 1127 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 GUCY1A3Q02108 690 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 BIRC2Q13490 618 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 KCNJ12Q14500 433 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 FAM102BQ5T8I3 360 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 TAS1R3Q7RTX0 852 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 SH2D3CQ8N5H7 860 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 TRIM58Q8NG06 486 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 SOCS4Q8WXH5 440 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 RSRC1Q96IZ7 334 aaKnown RBP7.18□□□□□ -1.26
TMC1-201ENST00000297784 OSBPL7Q9BZF2 842 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 THAP9Q9H5L6 903 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 LUC7L2Q9Y383 392 aaKnown RBP7.18□□□□□ -1.26
TMC1-201ENST00000297784 IGKV6-21A0A0C4DH24 114 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 TTC26A0AVF1 554 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 TISP43B9A030 160 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 NOP56O00567 594 aaKnown RBP7.18□□□□□ -1.26
TMC1-201ENST00000297784 TBCAO75347 108 aaKnown RBP7.18□□□□□ -1.26
TMC1-201ENST00000297784 FAM13AO94988 1023 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 GH1P01241 217 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 MMP3P08254 477 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 PAEPP09466 180 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 ARL2P36404 184 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 NPTX2P47972 431 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 ATP1A2P50993 1020 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 VAV2P52735 878 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 PEX3P56589 373 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 GTF2BQ00403 316 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 TNFAIP2Q03169 654 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 LRRC63Q05C16 580 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 RIPK1Q13546 671 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 TSR1Q2NL82 804 aaKnown RBP7.18□□□□□ -1.26
TMC1-201ENST00000297784 CFAP58Q5T655 872 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 LRIG3Q6UXM1 1119 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 CEP57Q86XR8 500 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 FAM178BQ8IXR5 827 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 TMEM161BQ8NDZ6 487 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 HDAC7Q8WUI4 952 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 TRAPPC12Q8WVT3 735 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.18□□□□□ -1.26
TMC1-201ENST00000297784 PIK3R5Q8WYR1 880 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 CCDC47Q96A33 483 aaKnown RBP7.18□□□□□ -1.26
TMC1-201ENST00000297784 TMEM143Q96AN5 459 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 KDM4CQ9H3R0 1056 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 SLC24A3Q9HC58 644 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 SPATS2LQ9NUQ6 558 aaKnown RBP7.18□□□□□ -1.26
TMC1-201ENST00000297784 SEL1LQ9UBV2 794 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 KAT6AQ92794 2004 aa7.17□□□□□ -1.26
TMC1-201ENST00000297784 BICDL2A1A5D9 508 aa7.17□□□□□ -1.26
TMC1-201ENST00000297784 A6NJR5 290 aa7.17□□□□□ -1.26
TMC1-201ENST00000297784 LGALS16A8MUM7 142 aa7.17□□□□□ -1.26
TMC1-201ENST00000297784 LIN7AO14910 233 aaPredicted RBP7.17□□□□□ -1.26
TMC1-201ENST00000297784 EIF3DO15371 548 aaKnown RBP eCLIP7.17□□□□□ -1.26
TMC1-201ENST00000297784 MAFO75444 373 aaPredicted RBP7.17□□□□□ -1.26
TMC1-201ENST00000297784 SCTRP47872 440 aa7.17□□□□□ -1.26
TMC1-201ENST00000297784 FCGRTP55899 365 aa7.17□□□□□ -1.26
TMC1-201ENST00000297784 SP3Q02447 781 aa7.17□□□□□ -1.26
TMC1-201ENST00000297784 HIC1Q14526 733 aa7.17□□□□□ -1.26
TMC1-201ENST00000297784 MARCH8Q5T0T0 291 aa7.17□□□□□ -1.26
TMC1-201ENST00000297784 REM2Q8IYK8 340 aaPredicted RBP7.17□□□□□ -1.26
TMC1-201ENST00000297784 EIF1ADQ8N9N8 165 aaKnown RBP7.17□□□□□ -1.26
TMC1-201ENST00000297784 RETREG2Q8NC44 543 aa7.17□□□□□ -1.26
TMC1-201ENST00000297784 ZSWIM2Q8NEG5 633 aa7.17□□□□□ -1.26
TMC1-201ENST00000297784 CCHCR1Q8TD31 782 aa7.17□□□□□ -1.26
TMC1-201ENST00000297784 TCP11Q8WWU5 503 aa7.17□□□□□ -1.26
TMC1-201ENST00000297784 GLG1Q92896 1179 aa7.17□□□□□ -1.26
TMC1-201ENST00000297784 CENPHQ9H3R5 247 aa7.17□□□□□ -1.26
TMC1-201ENST00000297784 ST6GALNAC4Q9H4F1 302 aa7.17□□□□□ -1.26
TMC1-201ENST00000297784 SLC5A4Q9NY91 659 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms