RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 SPATA4Q8NEY3 305 aa16.35■□□□□ 0.21
FNDC1-201ENST00000297267 CAPN10Q9HC96 672 aa16.35■□□□□ 0.21
FNDC1-201ENST00000297267 AGO2Q9UKV8 859 aaKnown RBP16.35■□□□□ 0.21
FNDC1-201ENST00000297267 MEFVO15553 781 aaPredicted RBP16.35■□□□□ 0.21
FNDC1-201ENST00000297267 SEC24CP53992 1094 aa16.35■□□□□ 0.21
FNDC1-201ENST00000297267 XPO7Q9UIA9 1087 aaKnown RBP16.35■□□□□ 0.21
FNDC1-201ENST00000297267 SYNGAP1Q96PV0 1343 aa16.35■□□□□ 0.21
FNDC1-201ENST00000297267 RAD51CO43502 376 aa16.35■□□□□ 0.21
FNDC1-201ENST00000297267 UBTFL6P0CB48 400 aaPredicted RBP16.35■□□□□ 0.21
FNDC1-201ENST00000297267 SCP2P22307 547 aa16.35■□□□□ 0.21
FNDC1-201ENST00000297267 PMS1P54277 932 aaKnown RBP16.35■□□□□ 0.21
FNDC1-201ENST00000297267 SARM1Q6SZW1 724 aa16.35■□□□□ 0.21
FNDC1-201ENST00000297267 MMS22LQ6ZRQ5 1243 aa16.35■□□□□ 0.21
FNDC1-201ENST00000297267 RNF19AQ9NV58 838 aa16.35■□□□□ 0.21
FNDC1-201ENST00000297267 KLK14Q9P0G3 267 aa16.35■□□□□ 0.21
FNDC1-201ENST00000297267 CTDNEP1O95476 244 aa16.35■□□□□ 0.21
FNDC1-201ENST00000297267 ARFIP2P53365 341 aa16.35■□□□□ 0.21
FNDC1-201ENST00000297267 C11orf96Q7Z7L8 435 aa16.35■□□□□ 0.21
FNDC1-201ENST00000297267 RHOT2Q8IXI1 618 aa16.35■□□□□ 0.21
FNDC1-201ENST00000297267 MIER2Q8N344 545 aa16.35■□□□□ 0.21
FNDC1-201ENST00000297267 RMDN1Q96DB5 314 aa16.35■□□□□ 0.21
FNDC1-201ENST00000297267 ELMO2Q96JJ3 720 aa16.35■□□□□ 0.21
FNDC1-201ENST00000297267 PJA2O43164 708 aa16.35■□□□□ 0.21
FNDC1-201ENST00000297267 HAUS5O94927 633 aa16.35■□□□□ 0.21
FNDC1-201ENST00000297267 APRTP07741 180 aa16.35■□□□□ 0.21
FNDC1-201ENST00000297267 SOX10P56693 466 aa16.35■□□□□ 0.21
FNDC1-201ENST00000297267 PID1Q7Z2X4 250 aa16.35■□□□□ 0.21
FNDC1-201ENST00000297267 GPD1LQ8N335 351 aa16.35■□□□□ 0.21
FNDC1-201ENST00000297267 CYFIP2Q96F07 1278 aa16.35■□□□□ 0.21
FNDC1-201ENST00000297267 POP1Q99575 1024 aaKnown RBP16.35■□□□□ 0.21
FNDC1-201ENST00000297267 TARSL2A2RTX5 802 aaKnown RBP16.34■□□□□ 0.21
FNDC1-201ENST00000297267 OVGP1Q12889 678 aa16.34■□□□□ 0.21
FNDC1-201ENST00000297267 ATP6V1G3Q96LB4 118 aa16.34■□□□□ 0.21
FNDC1-201ENST00000297267 PIN4Q9Y237 131 aaKnown RBP16.34■□□□□ 0.21
FNDC1-201ENST00000297267 MAP3K4Q9Y6R4 1608 aa16.34■□□□□ 0.21
FNDC1-201ENST00000297267 ARMCX2Q7L311 632 aa16.34■□□□□ 0.21
FNDC1-201ENST00000297267 ZNF473Q8WTR7 871 aaKnown RBP16.34■□□□□ 0.21
FNDC1-201ENST00000297267 CHMP2BQ9UQN3 213 aa16.34■□□□□ 0.21
FNDC1-201ENST00000297267 MAGEA9P43362 315 aa16.34■□□□□ 0.21
FNDC1-201ENST00000297267 QARSP47897 775 aaKnown RBP16.34■□□□□ 0.21
FNDC1-201ENST00000297267 ESRRGP62508 458 aa16.34■□□□□ 0.21
FNDC1-201ENST00000297267 EFTUD2Q15029 972 aaKnown RBP eCLIP16.34■□□□□ 0.21
FNDC1-201ENST00000297267 ING2Q9H160 280 aa16.34■□□□□ 0.21
FNDC1-201ENST00000297267 EPB41L4AQ9HCS5 686 aaPredicted RBP16.34■□□□□ 0.21
FNDC1-201ENST00000297267 CD248Q9HCU0 757 aa16.34■□□□□ 0.21
FNDC1-201ENST00000297267 RNF181Q9P0P0 153 aa16.34■□□□□ 0.21
FNDC1-201ENST00000297267 SCINQ9Y6U3 715 aa16.34■□□□□ 0.21
FNDC1-201ENST00000297267 C2CD2LO14523 706 aa16.34■□□□□ 0.21
FNDC1-201ENST00000297267 CIITAP33076 1130 aa16.34■□□□□ 0.21
FNDC1-201ENST00000297267 L3MBTL3Q96JM7 780 aaPredicted RBP16.34■□□□□ 0.21
FNDC1-201ENST00000297267 YIPF2Q9BWQ6 316 aa16.34■□□□□ 0.21
FNDC1-201ENST00000297267 ARHGEF5Q12774 1597 aa16.34■□□□□ 0.21
FNDC1-201ENST00000297267 SPHKAPQ2M3C7 1700 aa16.34■□□□□ 0.21
FNDC1-201ENST00000297267 DCTN3O75935 186 aa16.34■□□□□ 0.21
FNDC1-201ENST00000297267 STK4Q13043 487 aa16.34■□□□□ 0.21
FNDC1-201ENST00000297267 FAM160B2Q86V87 743 aa16.34■□□□□ 0.21
FNDC1-201ENST00000297267 LDHDQ86WU2 507 aa16.34■□□□□ 0.21
FNDC1-201ENST00000297267 RNF168Q8IYW5 571 aaPredicted RBP16.34■□□□□ 0.21
FNDC1-201ENST00000297267 THEM5Q8N1Q8 247 aa16.34■□□□□ 0.21
FNDC1-201ENST00000297267 NR1H4Q96RI1 486 aaPredicted RBP16.34■□□□□ 0.21
FNDC1-201ENST00000297267 ADNPQ9H2P0 1102 aa16.34■□□□□ 0.21
FNDC1-201ENST00000297267 USP20Q9Y2K6 914 aa16.34■□□□□ 0.21
FNDC1-201ENST00000297267 ZNF711Q9Y462 761 aa16.34■□□□□ 0.21
FNDC1-201ENST00000297267 CPB1P15086 417 aa16.33■□□□□ 0.21
FNDC1-201ENST00000297267 TAC1P20366 129 aa16.33■□□□□ 0.21
FNDC1-201ENST00000297267 BRD2P25440 801 aaKnown RBP16.33■□□□□ 0.21
FNDC1-201ENST00000297267 PRAMEP78395 509 aa16.33■□□□□ 0.21
FNDC1-201ENST00000297267 TRIM42Q8IWZ5 723 aa16.33■□□□□ 0.21
FNDC1-201ENST00000297267 ZNF280CQ8ND82 737 aa16.33■□□□□ 0.21
FNDC1-201ENST00000297267 KAT2BQ92831 832 aa16.33■□□□□ 0.21
FNDC1-201ENST00000297267 RSPH10B2B2RC85 870 aa16.33■□□□□ 0.2
FNDC1-201ENST00000297267 RSPH10BP0C881 870 aa16.33■□□□□ 0.2
FNDC1-201ENST00000297267 MDM2Q00987 491 aaPredicted RBP16.33■□□□□ 0.2
FNDC1-201ENST00000297267 DPYDQ12882 1025 aa16.33■□□□□ 0.2
FNDC1-201ENST00000297267 FUT11Q495W5 492 aa16.33■□□□□ 0.2
FNDC1-201ENST00000297267 ST13P4Q8IZP2 240 aaPredicted RBP16.33■□□□□ 0.2
FNDC1-201ENST00000297267 FAM81BQ96LP2 452 aa16.33■□□□□ 0.2
FNDC1-201ENST00000297267 PTPRHQ9HD43 1115 aa16.33■□□□□ 0.2
FNDC1-201ENST00000297267 ATP8B3O60423 1300 aa16.33■□□□□ 0.2
FNDC1-201ENST00000297267 PODXLO00592 558 aa16.33■□□□□ 0.2
FNDC1-201ENST00000297267 APOL1O14791 398 aa16.33■□□□□ 0.2
FNDC1-201ENST00000297267 ZBTB39O15060 712 aa16.33■□□□□ 0.2
FNDC1-201ENST00000297267 SPDYAQ5MJ70 313 aa16.33■□□□□ 0.2
FNDC1-201ENST00000297267 ACTR5Q9H9F9 607 aaPredicted RBP16.33■□□□□ 0.2
FNDC1-201ENST00000297267 FGFR1OP2Q9NVK5 253 aa16.33■□□□□ 0.2
FNDC1-201ENST00000297267 PIH1D1Q9NWS0 290 aaKnown RBP16.33■□□□□ 0.2
FNDC1-201ENST00000297267 NOP53Q9NZM5 478 aaKnown RBP16.33■□□□□ 0.2
FNDC1-201ENST00000297267 GYS1P13807 737 aa16.33■□□□□ 0.2
FNDC1-201ENST00000297267 JAK3P52333 1124 aa16.33■□□□□ 0.2
FNDC1-201ENST00000297267 ACAD11Q709F0 780 aa16.33■□□□□ 0.2
FNDC1-201ENST00000297267 CENPKQ9BS16 269 aa16.33■□□□□ 0.2
FNDC1-201ENST00000297267 PIF1Q9H611 641 aa16.33■□□□□ 0.2
FNDC1-201ENST00000297267 SYNDIG1Q9H7V2 258 aa16.33■□□□□ 0.2
FNDC1-201ENST00000297267 ENO4A6NNW6 628 aa16.33■□□□□ 0.2
FNDC1-201ENST00000297267 SKIP12755 728 aa16.33■□□□□ 0.2
FNDC1-201ENST00000297267 GLRA4Q5JXX5 417 aa16.33■□□□□ 0.2
FNDC1-201ENST00000297267 AGBL1Q96MI9 1066 aa16.33■□□□□ 0.2
FNDC1-201ENST00000297267 ENO3P13929 434 aaPredicted RBP16.32■□□□□ 0.2
FNDC1-201ENST00000297267 ATP2C1P98194 919 aaPredicted RBP16.32■□□□□ 0.2
FNDC1-201ENST00000297267 PDCD2Q16342 344 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms