RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 GJB6O95452 261 aa12.67□□□□□ -0.38
RHO-201ENST00000296271 GLRA2P23416 452 aa12.67□□□□□ -0.38
RHO-201ENST00000296271 GPC5P78333 572 aa12.67□□□□□ -0.38
RHO-201ENST00000296271 PDCLQ13371 301 aa12.67□□□□□ -0.38
RHO-201ENST00000296271 LY6KQ17RY6 165 aa12.67□□□□□ -0.38
RHO-201ENST00000296271 TTC27Q6P3X3 843 aa12.67□□□□□ -0.38
RHO-201ENST00000296271 CRELD2Q6UXH1 353 aaPredicted RBP12.67□□□□□ -0.38
RHO-201ENST00000296271 MAATS1Q7Z4T9 603 aa12.67□□□□□ -0.38
RHO-201ENST00000296271 PASD1Q8IV76 773 aa12.67□□□□□ -0.38
RHO-201ENST00000296271 GPD1LQ8N335 351 aa12.67□□□□□ -0.38
RHO-201ENST00000296271 SAMD3Q8N6K7 520 aa12.67□□□□□ -0.38
RHO-201ENST00000296271 KIFAP3Q92845 792 aa12.67□□□□□ -0.38
RHO-201ENST00000296271 ZNF653Q96CK0 615 aa12.67□□□□□ -0.38
RHO-201ENST00000296271 FBXL18Q96ME1 805 aa12.67□□□□□ -0.38
RHO-201ENST00000296271 SENP7Q9BQF6 1050 aa12.67□□□□□ -0.38
RHO-201ENST00000296271 ATP6V0A4Q9HBG4 840 aa12.67□□□□□ -0.38
RHO-201ENST00000296271 ARHGAP28Q9P2N2 729 aa12.67□□□□□ -0.38
RHO-201ENST00000296271 CEP350Q5VT06 3117 aa12.67□□□□□ -0.38
RHO-201ENST00000296271 CCDC66A2RUB6 948 aa12.67□□□□□ -0.38
RHO-201ENST00000296271 RTN2O75298 545 aa12.67□□□□□ -0.38
RHO-201ENST00000296271 DGAT1O75907 488 aa12.67□□□□□ -0.38
RHO-201ENST00000296271 CLSTN1O94985 981 aa12.67□□□□□ -0.38
RHO-201ENST00000296271 GJB1P08034 283 aa12.67□□□□□ -0.38
RHO-201ENST00000296271 NF2P35240 595 aa12.67□□□□□ -0.38
RHO-201ENST00000296271 KCNJ1P48048 391 aa12.67□□□□□ -0.38
RHO-201ENST00000296271 GPC3P51654 580 aa12.67□□□□□ -0.38
RHO-201ENST00000296271 TDRD10Q5VZ19 366 aaKnown RBP12.67□□□□□ -0.38
RHO-201ENST00000296271 GOLGA6L1Q8N7Z2 621 aa12.67□□□□□ -0.38
RHO-201ENST00000296271 ATP8B4Q8TF62 1192 aa12.67□□□□□ -0.38
RHO-201ENST00000296271 SPIRE2Q8WWL2 714 aa12.67□□□□□ -0.38
RHO-201ENST00000296271 RUFY1Q96T51 708 aa12.67□□□□□ -0.38
RHO-201ENST00000296271 FBXO40Q9UH90 709 aa12.67□□□□□ -0.38
RHO-201ENST00000296271 EXOC7Q9UPT5 735 aa12.67□□□□□ -0.38
RHO-201ENST00000296271 SOWAHBA6NEL2 793 aa12.66□□□□□ -0.38
RHO-201ENST00000296271 P4HA2O15460 535 aa12.66□□□□□ -0.38
RHO-201ENST00000296271 VNN1O95497 513 aa12.66□□□□□ -0.38
RHO-201ENST00000296271 CCDC172P0C7W6 258 aa12.66□□□□□ -0.38
RHO-201ENST00000296271 TNNI1P19237 187 aa12.66□□□□□ -0.38
RHO-201ENST00000296271 UBA1P22314 1058 aaKnown RBP12.66□□□□□ -0.38
RHO-201ENST00000296271 LIG4P49917 911 aa12.66□□□□□ -0.38
RHO-201ENST00000296271 MFAP3P55082 362 aa12.66□□□□□ -0.38
RHO-201ENST00000296271 CEP85LQ5SZL2 805 aa12.66□□□□□ -0.38
RHO-201ENST00000296271 GADL1Q6ZQY3 521 aa12.66□□□□□ -0.38
RHO-201ENST00000296271 CDR2LQ86X02 465 aaPredicted RBP12.66□□□□□ -0.38
RHO-201ENST00000296271 NCAPG2Q86XI2 1143 aa12.66□□□□□ -0.38
RHO-201ENST00000296271 APOBEC3FQ8IUX4 373 aaKnown RBP12.66□□□□□ -0.38
RHO-201ENST00000296271 OR5B17Q8NGF7 314 aa12.66□□□□□ -0.38
RHO-201ENST00000296271 NT5C1BQ96P26 610 aa12.66□□□□□ -0.38
RHO-201ENST00000296271 APOBEC3GQ9HC16 384 aaKnown RBP12.66□□□□□ -0.38
RHO-201ENST00000296271 ZNF302Q9NR11 478 aa12.66□□□□□ -0.38
RHO-201ENST00000296271 RSPH14Q9UHP6 348 aa12.66□□□□□ -0.38
RHO-201ENST00000296271 SNX24Q9Y343 169 aa12.66□□□□□ -0.38
RHO-201ENST00000296271 COQ4Q9Y3A0 265 aa12.66□□□□□ -0.38
RHO-201ENST00000296271 GSTTP1A0A1W2PQM5 241 aa12.66□□□□□ -0.38
RHO-201ENST00000296271 DCDC2CA8MYV0 355 aa12.66□□□□□ -0.38
RHO-201ENST00000296271 C19orf81C9J6K1 198 aa12.66□□□□□ -0.38
RHO-201ENST00000296271 IRF6O14896 467 aa12.66□□□□□ -0.38
RHO-201ENST00000296271 TNFSF9P41273 254 aa12.66□□□□□ -0.38
RHO-201ENST00000296271 PEX5P50542 639 aa12.66□□□□□ -0.38
RHO-201ENST00000296271 IRAK1P51617 712 aa12.66□□□□□ -0.38
RHO-201ENST00000296271 CHADLQ6NUI6 762 aa12.66□□□□□ -0.38
RHO-201ENST00000296271 LEKR1Q6ZMV7 388 aa12.66□□□□□ -0.38
RHO-201ENST00000296271 ZNF564Q8TBZ8 553 aaPredicted RBP12.66□□□□□ -0.38
RHO-201ENST00000296271 UBLCP1Q8WVY7 318 aaPredicted RBP12.66□□□□□ -0.38
RHO-201ENST00000296271 HERPUD2Q9BSE4 406 aa12.66□□□□□ -0.38
RHO-201ENST00000296271 ELP3Q9H9T3 547 aa12.66□□□□□ -0.38
RHO-201ENST00000296271 GINM1Q9NU53 330 aa12.66□□□□□ -0.38
RHO-201ENST00000296271 BHMG1C9JSJ3 638 aaPredicted RBP12.65□□□□□ -0.38
RHO-201ENST00000296271 ARIH2O95376 493 aa12.65□□□□□ -0.38
RHO-201ENST00000296271 ALDH5A1P51649 535 aaPredicted RBP12.65□□□□□ -0.38
RHO-201ENST00000296271 GUCY1A3Q02108 690 aa12.65□□□□□ -0.38
RHO-201ENST00000296271 STXBP2Q15833 593 aa12.65□□□□□ -0.38
RHO-201ENST00000296271 ALS2CLQ60I27 953 aa12.65□□□□□ -0.38
RHO-201ENST00000296271 MIS18BP1Q6P0N0 1132 aa12.65□□□□□ -0.38
RHO-201ENST00000296271 PRELID2Q8N945 189 aa12.65□□□□□ -0.38
RHO-201ENST00000296271 TMEM174Q8WUU8 243 aa12.65□□□□□ -0.38
RHO-201ENST00000296271 TRAPPC12Q8WVT3 735 aa12.65□□□□□ -0.38
RHO-201ENST00000296271 RUBCNQ92622 972 aa12.65□□□□□ -0.38
RHO-201ENST00000296271 OTUD5Q96G74 571 aa12.65□□□□□ -0.38
RHO-201ENST00000296271 CALR3Q96L12 384 aaKnown RBP12.65□□□□□ -0.38
RHO-201ENST00000296271 IWS1Q96ST2 819 aa12.65□□□□□ -0.38
RHO-201ENST00000296271 FAM118BQ9BPY3 351 aa12.65□□□□□ -0.38
RHO-201ENST00000296271 TIPINQ9BVW5 301 aa12.65□□□□□ -0.38
RHO-201ENST00000296271 HOXC10Q9NYD6 342 aa12.65□□□□□ -0.38
RHO-201ENST00000296271 PTPN22Q9Y2R2 807 aa12.65□□□□□ -0.38
RHO-201ENST00000296271 GRIN2DO15399 1336 aa12.65□□□□□ -0.38
RHO-201ENST00000296271 TRIM66O15016 1216 aa12.65□□□□□ -0.39
RHO-201ENST00000296271 HLA-DRAP01903 254 aa12.65□□□□□ -0.39
RHO-201ENST00000296271 OATP04181 439 aa12.65□□□□□ -0.39
RHO-201ENST00000296271 RFX1P22670 979 aa12.65□□□□□ -0.39
RHO-201ENST00000296271 HPDP32754 393 aaPredicted RBP12.65□□□□□ -0.39
RHO-201ENST00000296271 HSPA9P38646 679 aaKnown RBP12.65□□□□□ -0.39
RHO-201ENST00000296271 PDE6CP51160 858 aa12.65□□□□□ -0.39
RHO-201ENST00000296271 OAZ1P54368 228 aa12.65□□□□□ -0.39
RHO-201ENST00000296271 GNGT1P63211 74 aa12.65□□□□□ -0.39
RHO-201ENST00000296271 CDR2Q01850 454 aa12.65□□□□□ -0.39
RHO-201ENST00000296271 BIRC3Q13489 604 aa12.65□□□□□ -0.39
RHO-201ENST00000296271 XKR3Q5GH77 459 aa12.65□□□□□ -0.39
RHO-201ENST00000296271 ZBTB33Q86T24 672 aa12.65□□□□□ -0.39
RHO-201ENST00000296271 LRRC71Q8N4P6 559 aa12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms