RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 TRADDQ15628 312 aa14.28□□□□□ -0.12
HPS3-201ENST00000296051 JAMLQ86YT9 394 aa14.28□□□□□ -0.12
HPS3-201ENST00000296051 ATG4CQ96DT6 458 aa14.28□□□□□ -0.12
HPS3-201ENST00000296051 CFAP57Q96MR6 1250 aa14.28□□□□□ -0.12
HPS3-201ENST00000296051 CALN1Q9BXU9 219 aa14.28□□□□□ -0.12
HPS3-201ENST00000296051 EDEM3Q9BZQ6 932 aa14.28□□□□□ -0.12
HPS3-201ENST00000296051 DPYSL4O14531 572 aa14.28□□□□□ -0.12
HPS3-201ENST00000296051 TRPA1O75762 1119 aa14.28□□□□□ -0.12
HPS3-201ENST00000296051 KITP10721 976 aa14.28□□□□□ -0.12
HPS3-201ENST00000296051 CASP7P55210 303 aa14.28□□□□□ -0.12
HPS3-201ENST00000296051 SYCP2LQ5T4T6 812 aa14.28□□□□□ -0.12
HPS3-201ENST00000296051 WDR59Q6PJI9 974 aa14.28□□□□□ -0.12
HPS3-201ENST00000296051 ZNF564Q8TBZ8 553 aaPredicted RBP14.28□□□□□ -0.12
HPS3-201ENST00000296051 FBXO25Q8TCJ0 367 aa14.28□□□□□ -0.12
HPS3-201ENST00000296051 HSD3B7Q9H2F3 369 aa14.28□□□□□ -0.12
HPS3-201ENST00000296051 PPARGC1AQ9UBK2 798 aaKnown RBP14.28□□□□□ -0.12
HPS3-201ENST00000296051 USP15Q9Y4E8 981 aaPredicted RBP14.28□□□□□ -0.12
HPS3-201ENST00000296051 hCG_2014768A0A024R1R8 64 aa14.28□□□□□ -0.12
HPS3-201ENST00000296051 STXBP3O00186 592 aa14.28□□□□□ -0.12
HPS3-201ENST00000296051 USP11P51784 963 aa14.28□□□□□ -0.12
HPS3-201ENST00000296051 SLC20A2Q08357 652 aa14.28□□□□□ -0.12
HPS3-201ENST00000296051 FBXO33Q7Z6M2 555 aa14.28□□□□□ -0.12
HPS3-201ENST00000296051 BBOF1Q8ND07 529 aa14.28□□□□□ -0.12
HPS3-201ENST00000296051 CCNYQ8ND76 341 aa14.28□□□□□ -0.12
HPS3-201ENST00000296051 EPS8L3Q8TE67 593 aaKnown RBP14.28□□□□□ -0.12
HPS3-201ENST00000296051 ABTB1Q969K4 478 aaPredicted RBP14.28□□□□□ -0.12
HPS3-201ENST00000296051 ERP27Q96DN0 273 aa14.28□□□□□ -0.12
HPS3-201ENST00000296051 DDX20Q9UHI6 824 aaKnown RBP14.28□□□□□ -0.12
HPS3-201ENST00000296051 MIF4GDA9UHW6 222 aaKnown RBP14.27□□□□□ -0.12
HPS3-201ENST00000296051 KIF1CO43896 1103 aaKnown RBP14.27□□□□□ -0.12
HPS3-201ENST00000296051 CHRNA3P32297 505 aa14.27□□□□□ -0.12
HPS3-201ENST00000296051 NFIAQ12857 509 aa14.27□□□□□ -0.12
HPS3-201ENST00000296051 NAALADL2Q58DX5 795 aa14.27□□□□□ -0.12
HPS3-201ENST00000296051 NXNQ6DKJ4 435 aa14.27□□□□□ -0.12
HPS3-201ENST00000296051 AENQ8WTP8 325 aaKnown RBP14.27□□□□□ -0.12
HPS3-201ENST00000296051 PYROXD1Q8WU10 500 aa14.27□□□□□ -0.12
HPS3-201ENST00000296051 DUSP9Q99956 384 aaKnown RBP14.27□□□□□ -0.12
HPS3-201ENST00000296051 C11orf70Q9BRQ4 267 aa14.27□□□□□ -0.12
HPS3-201ENST00000296051 SLC38A10Q9HBR0 1119 aa14.27□□□□□ -0.12
HPS3-201ENST00000296051 FBXO28Q9NVF7 368 aa14.27□□□□□ -0.12
HPS3-201ENST00000296051 KLHL11Q9NVR0 708 aa14.27□□□□□ -0.12
HPS3-201ENST00000296051 ZFP69BQ9UJL9 534 aa14.27□□□□□ -0.12
HPS3-201ENST00000296051 NAGPAQ9UK23 515 aa14.27□□□□□ -0.12
HPS3-201ENST00000296051 PPP1R9AQ9ULJ8 1098 aa14.27□□□□□ -0.12
HPS3-201ENST00000296051 PDE4DIPQ5VU43 2346 aa14.27□□□□□ -0.12
HPS3-201ENST00000296051 EPHB6O15197 1021 aa14.27□□□□□ -0.12
HPS3-201ENST00000296051 MYBP10242 640 aa14.27□□□□□ -0.12
HPS3-201ENST00000296051 RARBP10826 455 aa14.27□□□□□ -0.12
HPS3-201ENST00000296051 ZC2HC1CQ53FD0 456 aaPredicted RBP14.27□□□□□ -0.12
HPS3-201ENST00000296051 ZNF667Q5HYK9 610 aa14.27□□□□□ -0.12
HPS3-201ENST00000296051 SLFN12LQ6IEE8 588 aa14.27□□□□□ -0.12
HPS3-201ENST00000296051 GLT1D1Q96MS3 346 aa14.27□□□□□ -0.12
HPS3-201ENST00000296051 GCOM2Q9BZD3 368 aaPredicted RBP14.27□□□□□ -0.12
HPS3-201ENST00000296051 OSGEPQ9NPF4 335 aa14.27□□□□□ -0.12
HPS3-201ENST00000296051 KBTBD4Q9NVX7 518 aa14.27□□□□□ -0.12
HPS3-201ENST00000296051 LMCD1Q9NZU5 365 aa14.27□□□□□ -0.12
HPS3-201ENST00000296051 NR3C2P08235 984 aa14.27□□□□□ -0.13
HPS3-201ENST00000296051 KRT17Q04695 432 aa14.27□□□□□ -0.13
HPS3-201ENST00000296051 DRP2Q13474 957 aa14.27□□□□□ -0.13
HPS3-201ENST00000296051 CEP55Q53EZ4 464 aa14.27□□□□□ -0.13
HPS3-201ENST00000296051 NAIF1Q69YI7 327 aaPredicted RBP14.27□□□□□ -0.13
HPS3-201ENST00000296051 SYT2Q8N9I0 419 aaPredicted RBP14.27□□□□□ -0.13
HPS3-201ENST00000296051 REXO2Q9Y3B8 237 aaKnown RBP14.27□□□□□ -0.13
HPS3-201ENST00000296051 PCDHA10Q9Y5I2 948 aa14.27□□□□□ -0.13
HPS3-201ENST00000296051 CFAP73A6NFT4 308 aa14.27□□□□□ -0.13
HPS3-201ENST00000296051 MAP3K7O43318 606 aa14.27□□□□□ -0.13
HPS3-201ENST00000296051 ANP32DO95626 131 aa14.27□□□□□ -0.13
HPS3-201ENST00000296051 P4HBP07237 508 aaKnown RBP14.27□□□□□ -0.13
HPS3-201ENST00000296051 AARSP49588 968 aaKnown RBP eCLIP14.27□□□□□ -0.13
HPS3-201ENST00000296051 TMEM62Q0P6H9 643 aa14.27□□□□□ -0.13
HPS3-201ENST00000296051 MAP7Q14244 749 aa14.27□□□□□ -0.13
HPS3-201ENST00000296051 SEC23AQ15436 765 aa14.27□□□□□ -0.13
HPS3-201ENST00000296051 BBS5Q8N3I7 341 aa14.27□□□□□ -0.13
HPS3-201ENST00000296051 FAM20AQ96MK3 541 aa14.27□□□□□ -0.13
HPS3-201ENST00000296051 KLF6Q99612 283 aaPredicted RBP14.27□□□□□ -0.13
HPS3-201ENST00000296051 ERP44Q9BS26 406 aa14.27□□□□□ -0.13
HPS3-201ENST00000296051 SMYD3Q9H7B4 428 aa14.27□□□□□ -0.13
HPS3-201ENST00000296051 SLC37A4O43826 429 aa14.26□□□□□ -0.13
HPS3-201ENST00000296051 PAX7P23759 505 aa14.26□□□□□ -0.13
HPS3-201ENST00000296051 SOX5P35711 763 aa14.26□□□□□ -0.13
HPS3-201ENST00000296051 LRRC36Q1X8D7 754 aa14.26□□□□□ -0.13
HPS3-201ENST00000296051 TXNRD3Q86VQ6 643 aa14.26□□□□□ -0.13
HPS3-201ENST00000296051 MAP7D3Q8IWC1 876 aa14.26□□□□□ -0.13
HPS3-201ENST00000296051 PIP4K2CQ8TBX8 421 aa14.26□□□□□ -0.13
HPS3-201ENST00000296051 GLIS2Q9BZE0 524 aaPredicted RBP14.26□□□□□ -0.13
HPS3-201ENST00000296051 INTS2Q9H0H0 1204 aaKnown RBP14.26□□□□□ -0.13
HPS3-201ENST00000296051 TMBIM4Q9HC24 238 aa14.26□□□□□ -0.13
HPS3-201ENST00000296051 SLC9A2Q9UBY0 812 aa14.26□□□□□ -0.13
HPS3-201ENST00000296051 ALG6Q9Y672 507 aa14.26□□□□□ -0.13
HPS3-201ENST00000296051 A0A1W2PQJ5 194 aa14.26□□□□□ -0.13
HPS3-201ENST00000296051 ESYT2A0FGR8 921 aa14.26□□□□□ -0.13
HPS3-201ENST00000296051 WTIPA6NIX2 430 aaPredicted RBP14.26□□□□□ -0.13
HPS3-201ENST00000296051 PI4K2BG5E9Z4 385 aa14.26□□□□□ -0.13
HPS3-201ENST00000296051 ERVK-9P63128 1117 aa14.26□□□□□ -0.13
HPS3-201ENST00000296051 NBPF12Q5TAG4 269 aaPredicted RBP14.26□□□□□ -0.13
HPS3-201ENST00000296051 STAMBPL1Q96FJ0 436 aa14.26□□□□□ -0.13
HPS3-201ENST00000296051 PRR12Q9ULL5 1215 aa14.26□□□□□ -0.13
HPS3-201ENST00000296051 RIMS1Q86UR5 1692 aaKnown RBP14.26□□□□□ -0.13
HPS3-201ENST00000296051 HSPA9P38646 679 aaKnown RBP14.26□□□□□ -0.13
HPS3-201ENST00000296051 GRAMD1BQ3KR37 738 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms