RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 HDAC7Q8WUI4 952 aa21.67■■□□□ 1.06
CXCL3-201ENST00000296026 SMG7Q92540 1137 aaKnown RBP21.67■■□□□ 1.06
CXCL3-201ENST00000296026 PAAF1Q9BRP4 392 aa21.67■■□□□ 1.06
CXCL3-201ENST00000296026 RHOBTB2Q9BYZ6 727 aa21.67■■□□□ 1.06
CXCL3-201ENST00000296026 PLEKHA4Q9H4M7 779 aa21.67■■□□□ 1.06
CXCL3-201ENST00000296026 SNTG2Q9NY99 539 aa21.67■■□□□ 1.06
CXCL3-201ENST00000296026 FNIP2Q9P278 1114 aa21.67■■□□□ 1.06
CXCL3-201ENST00000296026 USP20Q9Y2K6 914 aa21.67■■□□□ 1.06
CXCL3-201ENST00000296026 CLUHO75153 1309 aa21.66■■□□□ 1.06
CXCL3-201ENST00000296026 TGM5O43548 720 aa21.66■■□□□ 1.06
CXCL3-201ENST00000296026 C1RP00736 705 aa21.66■■□□□ 1.06
CXCL3-201ENST00000296026 PRKCBP05771 671 aa21.66■■□□□ 1.06
CXCL3-201ENST00000296026 RPL17P18621 184 aaKnown RBP21.66■■□□□ 1.06
CXCL3-201ENST00000296026 LIG1P18858 919 aa21.66■■□□□ 1.06
CXCL3-201ENST00000296026 GBP2P32456 591 aaPredicted RBP21.66■■□□□ 1.06
CXCL3-201ENST00000296026 NAMPTP43490 491 aa21.66■■□□□ 1.06
CXCL3-201ENST00000296026 RBM25P49756 843 aaKnown RBP21.66■■□□□ 1.06
CXCL3-201ENST00000296026 HAUS3Q68CZ6 603 aa21.66■■□□□ 1.06
CXCL3-201ENST00000296026 ASTLQ6HA08 431 aaPredicted RBP21.66■■□□□ 1.06
CXCL3-201ENST00000296026 DEPTORQ8TB45 409 aa21.66■■□□□ 1.06
CXCL3-201ENST00000296026 STAMQ92783 540 aa21.66■■□□□ 1.06
CXCL3-201ENST00000296026 CCDC113Q9H0I3 377 aa21.66■■□□□ 1.06
CXCL3-201ENST00000296026 SF3B1O75533 1304 aaKnown RBP eCLIP21.65■■□□□ 1.06
CXCL3-201ENST00000296026 CASTOR2A6NHX0 329 aa21.65■■□□□ 1.06
CXCL3-201ENST00000296026 ACKR2O00590 384 aa21.65■■□□□ 1.06
CXCL3-201ENST00000296026 PTGESO14684 152 aa21.65■■□□□ 1.06
CXCL3-201ENST00000296026 RECQL4O94761 1208 aa21.65■■□□□ 1.06
CXCL3-201ENST00000296026 MUTP22033 750 aa21.65■■□□□ 1.06
CXCL3-201ENST00000296026 CCT6AP40227 531 aaKnown RBP21.65■■□□□ 1.06
CXCL3-201ENST00000296026 HMGN5P82970 282 aaKnown RBP21.65■■□□□ 1.06
CXCL3-201ENST00000296026 CREMQ03060 361 aa21.65■■□□□ 1.06
CXCL3-201ENST00000296026 PPP2R5AQ15172 486 aa21.65■■□□□ 1.06
CXCL3-201ENST00000296026 LILRA6Q6PI73 481 aa21.65■■□□□ 1.06
CXCL3-201ENST00000296026 PRSS55Q6UWB4 352 aaPredicted RBP21.65■■□□□ 1.06
CXCL3-201ENST00000296026 NOSTRINQ8IVI9 506 aa21.65■■□□□ 1.06
CXCL3-201ENST00000296026 FAM184AQ8NB25 1140 aa21.65■■□□□ 1.06
CXCL3-201ENST00000296026 HASPINQ8TF76 798 aa21.65■■□□□ 1.06
CXCL3-201ENST00000296026 ZNF707Q96C28 371 aaPredicted RBP21.65■■□□□ 1.06
CXCL3-201ENST00000296026 ZSCAN31Q96LW9 406 aaPredicted RBP21.65■■□□□ 1.06
CXCL3-201ENST00000296026 ADPGKQ9BRR6 497 aa21.65■■□□□ 1.06
CXCL3-201ENST00000296026 PIDD1Q9HB75 910 aa21.65■■□□□ 1.06
CXCL3-201ENST00000296026 POLD4Q9HCU8 107 aa21.65■■□□□ 1.06
CXCL3-201ENST00000296026 IGSF9Q9P2J2 1179 aa21.65■■□□□ 1.06
CXCL3-201ENST00000296026 DUSP12Q9UNI6 340 aa21.65■■□□□ 1.06
CXCL3-201ENST00000296026 EDN1P05305 212 aa21.64■■□□□ 1.05
CXCL3-201ENST00000296026 THP07101 528 aa21.64■■□□□ 1.05
CXCL3-201ENST00000296026 TRAPPC10P48553 1259 aa21.64■■□□□ 1.05
CXCL3-201ENST00000296026 CLCN5P51795 746 aa21.64■■□□□ 1.05
CXCL3-201ENST00000296026 NBR1Q14596 966 aa21.64■■□□□ 1.05
CXCL3-201ENST00000296026 ECM1Q16610 540 aa21.64■■□□□ 1.05
CXCL3-201ENST00000296026 RTP2Q5QGT7 225 aa21.64■■□□□ 1.05
CXCL3-201ENST00000296026 EEF1DP3Q658K8 133 aa21.64■■□□□ 1.05
CXCL3-201ENST00000296026 FLCNQ8NFG4 579 aa21.64■■□□□ 1.05
CXCL3-201ENST00000296026 NT5C3AQ9H0P0 336 aa21.64■■□□□ 1.05
CXCL3-201ENST00000296026 CXCL16Q9H2A7 254 aa21.64■■□□□ 1.05
CXCL3-201ENST00000296026 BHMT2Q9H2M3 363 aa21.64■■□□□ 1.05
CXCL3-201ENST00000296026 ZDHHC7Q9NXF8 308 aa21.64■■□□□ 1.05
CXCL3-201ENST00000296026 NOL7Q9UMY1 257 aaKnown RBP21.64■■□□□ 1.05
CXCL3-201ENST00000296026 MTCL1Q9Y4B5 1905 aaKnown RBP21.64■■□□□ 1.05
CXCL3-201ENST00000296026 KIF4AO95239 1232 aa21.63■■□□□ 1.05
CXCL3-201ENST00000296026 PAPLNO95428 1278 aa21.63■■□□□ 1.05
CXCL3-201ENST00000296026 FXR2P51116 673 aaKnown RBP eCLIP21.63■■□□□ 1.05
CXCL3-201ENST00000296026 C4orf32Q8N8J7 132 aa21.63■■□□□ 1.05
CXCL3-201ENST00000296026 RSAD2Q8WXG1 361 aa21.63■■□□□ 1.05
CXCL3-201ENST00000296026 IFT74Q96LB3 600 aa21.63■■□□□ 1.05
CXCL3-201ENST00000296026 MYADMQ96S97 322 aa21.63■■□□□ 1.05
CXCL3-201ENST00000296026 KIFC3Q9BVG8 833 aa21.63■■□□□ 1.05
CXCL3-201ENST00000296026 PRKD2Q9BZL6 878 aa21.63■■□□□ 1.05
CXCL3-201ENST00000296026 LRWD1Q9UFC0 647 aa21.63■■□□□ 1.05
CXCL3-201ENST00000296026 FBXL21Q9UKT6 434 aa21.63■■□□□ 1.05
CXCL3-201ENST00000296026 NAB2Q15742 525 aa21.62■■□□□ 1.05
CXCL3-201ENST00000296026 FAM171A1Q5VUB5 890 aa21.62■■□□□ 1.05
CXCL3-201ENST00000296026 CWF19L1Q69YN2 538 aaKnown RBP21.62■■□□□ 1.05
CXCL3-201ENST00000296026 CEP57Q86XR8 500 aa21.62■■□□□ 1.05
CXCL3-201ENST00000296026 TTPALQ9BTX7 342 aa21.62■■□□□ 1.05
CXCL3-201ENST00000296026 SH2B1Q9NRF2 756 aaPredicted RBP21.62■■□□□ 1.05
CXCL3-201ENST00000296026 EPS15L1Q9UBC2 864 aa21.62■■□□□ 1.05
CXCL3-201ENST00000296026 KIAA1024Q9UPX6 916 aa21.62■■□□□ 1.05
CXCL3-201ENST00000296026 GDAQ9Y2T3 454 aa21.62■■□□□ 1.05
CXCL3-201ENST00000296026 NARSO43776 548 aaKnown RBP21.61■■□□□ 1.05
CXCL3-201ENST00000296026 ZMYND10O75800 440 aa21.61■■□□□ 1.05
CXCL3-201ENST00000296026 EFNA5P52803 228 aa21.61■■□□□ 1.05
CXCL3-201ENST00000296026 DCAF4L1Q3SXM0 396 aa21.61■■□□□ 1.05
CXCL3-201ENST00000296026 PIK3R5Q8WYR1 880 aa21.61■■□□□ 1.05
CXCL3-201ENST00000296026 KIFAP3Q92845 792 aa21.61■■□□□ 1.05
CXCL3-201ENST00000296026 DDX19AQ9NUU7 478 aaKnown RBP21.61■■□□□ 1.05
CXCL3-201ENST00000296026 GFRA3O60609 400 aa21.6■■□□□ 1.05
CXCL3-201ENST00000296026 NPR3P17342 541 aa21.6■■□□□ 1.05
CXCL3-201ENST00000296026 ELAVL2Q12926 359 aaKnown RBP21.6■■□□□ 1.05
CXCL3-201ENST00000296026 PDIA5Q14554 519 aa21.6■■□□□ 1.05
CXCL3-201ENST00000296026 PSMD5Q16401 504 aa21.6■■□□□ 1.05
CXCL3-201ENST00000296026 NT5DC1Q5TFE4 455 aa21.6■■□□□ 1.05
CXCL3-201ENST00000296026 ATF7IP2Q5U623 682 aa21.6■■□□□ 1.05
CXCL3-201ENST00000296026 GET4Q7L5D6 327 aaPredicted RBP21.6■■□□□ 1.05
CXCL3-201ENST00000296026 SIX5Q8N196 739 aa21.6■■□□□ 1.05
CXCL3-201ENST00000296026 LNX1Q8TBB1 728 aaPredicted RBP21.6■■□□□ 1.05
CXCL3-201ENST00000296026 SNX29Q8TEQ0 813 aa21.6■■□□□ 1.05
CXCL3-201ENST00000296026 KIF2CQ99661 725 aa21.6■■□□□ 1.05
CXCL3-201ENST00000296026 CLSTN3Q9BQT9 956 aa21.6■■□□□ 1.05
CXCL3-201ENST00000296026 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms