RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 PAXBP1Q9Y5B6 917 aa24.75■■□□□ 1.55
PTX3-201ENST00000295927 F8VZ95 297 aa24.74■■□□□ 1.55
PTX3-201ENST00000295927 OGTO15294 1046 aa24.74■■□□□ 1.55
PTX3-201ENST00000295927 PNMA6AP0CW24 399 aaPredicted RBP24.74■■□□□ 1.55
PTX3-201ENST00000295927 STAT1P42224 750 aa24.74■■□□□ 1.55
PTX3-201ENST00000295927 GPC3P51654 580 aa24.74■■□□□ 1.55
PTX3-201ENST00000295927 GPR88Q9GZN0 384 aa24.74■■□□□ 1.55
PTX3-201ENST00000295927 HAUS4Q9H6D7 363 aa24.74■■□□□ 1.55
PTX3-201ENST00000295927 RNF186Q9NXI6 227 aa24.74■■□□□ 1.55
PTX3-201ENST00000295927 DNAI1Q9UI46 699 aa24.74■■□□□ 1.55
PTX3-201ENST00000295927 MYADML2A6NDP7 307 aa24.74■■□□□ 1.55
PTX3-201ENST00000295927 ZEB2O60315 1214 aa24.74■■□□□ 1.55
PTX3-201ENST00000295927 C6orf222P0C671 652 aaPredicted RBP24.74■■□□□ 1.55
PTX3-201ENST00000295927 TNFSF9P41273 254 aa24.74■■□□□ 1.55
PTX3-201ENST00000295927 GNG11P61952 73 aa24.74■■□□□ 1.55
PTX3-201ENST00000295927 PURAQ00577 322 aaKnown RBP24.74■■□□□ 1.55
PTX3-201ENST00000295927 AMHR2Q16671 573 aa24.74■■□□□ 1.55
PTX3-201ENST00000295927 TMEM132AQ24JP5 1023 aa24.74■■□□□ 1.55
PTX3-201ENST00000295927 LMBRD2Q68DH5 695 aaPredicted RBP24.74■■□□□ 1.55
PTX3-201ENST00000295927 KIAA1328Q86T90 577 aa24.74■■□□□ 1.55
PTX3-201ENST00000295927 ZNF784Q8NCA9 323 aaPredicted RBP24.74■■□□□ 1.55
PTX3-201ENST00000295927 FBXL13Q8NEE6 735 aa24.74■■□□□ 1.55
PTX3-201ENST00000295927 TAS1R2Q8TE23 839 aa24.74■■□□□ 1.55
PTX3-201ENST00000295927 FAM84AQ96KN4 292 aa24.74■■□□□ 1.55
PTX3-201ENST00000295927 IRX2Q9BZI1 471 aaPredicted RBP24.74■■□□□ 1.55
PTX3-201ENST00000295927 UBE2TQ9NPD8 197 aaPredicted RBP24.74■■□□□ 1.55
PTX3-201ENST00000295927 TRIP12Q14669 1992 aaPredicted RBP24.74■■□□□ 1.55
PTX3-201ENST00000295927 MBLAC1A4D2B0 266 aaPredicted RBP24.73■■□□□ 1.55
PTX3-201ENST00000295927 TNNI1P19237 187 aa24.73■■□□□ 1.55
PTX3-201ENST00000295927 SOX5P35711 763 aa24.73■■□□□ 1.55
PTX3-201ENST00000295927 PRKCIP41743 596 aa24.73■■□□□ 1.55
PTX3-201ENST00000295927 GJA9P57773 515 aa24.73■■□□□ 1.55
PTX3-201ENST00000295927 CACNB2Q08289 660 aaPredicted RBP24.73■■□□□ 1.55
PTX3-201ENST00000295927 HIC1Q14526 733 aa24.73■■□□□ 1.55
PTX3-201ENST00000295927 ARHGAP44Q17R89 818 aa24.73■■□□□ 1.55
PTX3-201ENST00000295927 ZNF568Q3ZCX4 644 aa24.73■■□□□ 1.55
PTX3-201ENST00000295927 EEF1DP3Q658K8 133 aa24.73■■□□□ 1.55
PTX3-201ENST00000295927 C15orf39Q6ZRI6 1047 aa24.73■■□□□ 1.55
PTX3-201ENST00000295927 PRIMPOLQ96LW4 560 aa24.73■■□□□ 1.55
PTX3-201ENST00000295927 SCLT1Q96NL6 688 aa24.73■■□□□ 1.55
PTX3-201ENST00000295927 KATNAL1Q9BW62 490 aa24.73■■□□□ 1.55
PTX3-201ENST00000295927 RAB20Q9NX57 234 aa24.73■■□□□ 1.55
PTX3-201ENST00000295927 TFR2Q9UP52 801 aa24.73■■□□□ 1.55
PTX3-201ENST00000295927 TNFSF13BQ9Y275 285 aa24.73■■□□□ 1.55
PTX3-201ENST00000295927 BZW2Q9Y6E2 419 aaKnown RBP24.73■■□□□ 1.55
PTX3-201ENST00000295927 PTPRJQ12913 1337 aa24.73■■□□□ 1.55
PTX3-201ENST00000295927 CNTNAP2Q9UHC6 1331 aa24.73■■□□□ 1.55
PTX3-201ENST00000295927 ADAM17P78536 824 aa24.73■■□□□ 1.55
PTX3-201ENST00000295927 GFPT1Q06210 699 aaPredicted RBP24.73■■□□□ 1.55
PTX3-201ENST00000295927 ZNF410Q86VK4 478 aa24.73■■□□□ 1.55
PTX3-201ENST00000295927 CDR2LQ86X02 465 aaPredicted RBP24.73■■□□□ 1.55
PTX3-201ENST00000295927 BRSK2Q8IWQ3 736 aa24.73■■□□□ 1.55
PTX3-201ENST00000295927 FAM49AQ9H0Q0 323 aaPredicted RBP24.73■■□□□ 1.55
PTX3-201ENST00000295927 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.73■■□□□ 1.55
PTX3-201ENST00000295927 SEPT4O43236 478 aa24.72■■□□□ 1.55
PTX3-201ENST00000295927 GFPT2O94808 682 aa24.72■■□□□ 1.55
PTX3-201ENST00000295927 CYP2C9P11712 490 aa24.72■■□□□ 1.55
PTX3-201ENST00000295927 FERP16591 822 aa24.72■■□□□ 1.55
PTX3-201ENST00000295927 PTK2Q05397 1052 aa24.72■■□□□ 1.55
PTX3-201ENST00000295927 ZNF662Q6ZS27 426 aa24.72■■□□□ 1.55
PTX3-201ENST00000295927 CGRRF1Q99675 332 aa24.72■■□□□ 1.55
PTX3-201ENST00000295927 TRIM10Q9UDY6 481 aa24.72■■□□□ 1.55
PTX3-201ENST00000295927 PCDHA13Q9Y5I0 950 aa24.72■■□□□ 1.55
PTX3-201ENST00000295927 SMIM35A0A1B0GVV1 85 aa24.71■■□□□ 1.55
PTX3-201ENST00000295927 RCCD1A6NED2 376 aa24.71■■□□□ 1.55
PTX3-201ENST00000295927 FANCGO15287 622 aa24.71■■□□□ 1.55
PTX3-201ENST00000295927 KIF5CO60282 957 aa24.71■■□□□ 1.55
PTX3-201ENST00000295927 C4BPAP04003 597 aaKnown RBP24.71■■□□□ 1.55
PTX3-201ENST00000295927 MAP2K2P36507 400 aa24.71■■□□□ 1.55
PTX3-201ENST00000295927 VAV2P52735 878 aa24.71■■□□□ 1.55
PTX3-201ENST00000295927 GNASQ5JWF2 1037 aa24.71■■□□□ 1.55
PTX3-201ENST00000295927 ZNF571Q7Z3V5 609 aaPredicted RBP24.71■■□□□ 1.55
PTX3-201ENST00000295927 CD99L2Q8TCZ2 262 aa24.71■■□□□ 1.55
PTX3-201ENST00000295927 JAKMIP2Q96AA8 810 aa24.71■■□□□ 1.55
PTX3-201ENST00000295927 WDR24Q96S15 920 aa24.71■■□□□ 1.55
PTX3-201ENST00000295927 IFIH1Q9BYX4 1025 aaKnown RBP24.71■■□□□ 1.55
PTX3-201ENST00000295927 CPSF3Q9UKF6 684 aaKnown RBP24.71■■□□□ 1.55
PTX3-201ENST00000295927 RBAK-RBAKDNI3L0D1 243 aa24.71■■□□□ 1.55
PTX3-201ENST00000295927 EVI5O60447 810 aa24.71■■□□□ 1.55
PTX3-201ENST00000295927 ELNP15502 786 aa24.71■■□□□ 1.55
PTX3-201ENST00000295927 VEGFBP49765 207 aa24.71■■□□□ 1.55
PTX3-201ENST00000295927 ZACNQ401N2 412 aa24.71■■□□□ 1.55
PTX3-201ENST00000295927 RUFY4Q6ZNE9 571 aa24.71■■□□□ 1.55
PTX3-201ENST00000295927 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.71■■□□□ 1.55
PTX3-201ENST00000295927 LACRTQ9GZZ8 138 aa24.71■■□□□ 1.55
PTX3-201ENST00000295927 UPF3AQ9H1J1 476 aaKnown RBP24.71■■□□□ 1.55
PTX3-201ENST00000295927 CDT1Q9H211 546 aa24.71■■□□□ 1.55
PTX3-201ENST00000295927 KPNA6O60684 536 aa24.7■■□□□ 1.54
PTX3-201ENST00000295927 PGK1P00558 417 aa24.7■■□□□ 1.54
PTX3-201ENST00000295927 TMEM62Q0P6H9 643 aa24.7■■□□□ 1.54
PTX3-201ENST00000295927 SLC18A3Q16572 532 aa24.7■■□□□ 1.54
PTX3-201ENST00000295927 KIZQ2M2Z5 673 aa24.7■■□□□ 1.54
PTX3-201ENST00000295927 CCDC122Q5T0U0 273 aa24.7■■□□□ 1.54
PTX3-201ENST00000295927 TDRD10Q5VZ19 366 aaKnown RBP24.7■■□□□ 1.54
PTX3-201ENST00000295927 SRGAP1Q7Z6B7 1085 aa24.7■■□□□ 1.54
PTX3-201ENST00000295927 THNSL1Q8IYQ7 743 aa24.7■■□□□ 1.54
PTX3-201ENST00000295927 VTI1AQ96AJ9 217 aa24.7■■□□□ 1.54
PTX3-201ENST00000295927 ADAMTS10Q9H324 1103 aa24.7■■□□□ 1.54
PTX3-201ENST00000295927 GUCA1BQ9UMX6 200 aa24.7■■□□□ 1.54
PTX3-201ENST00000295927 FOXN3O00409 490 aaPredicted RBP24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 248.1 ms