RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 CBWD2Q8IUF1 395 aa19.36■□□□□ 0.69
CCDC78-201ENST00000293889 FAM186BQ8IYM0 893 aa19.36■□□□□ 0.69
CCDC78-201ENST00000293889 MKNK1Q9BUB5 465 aa19.36■□□□□ 0.69
CCDC78-201ENST00000293889 EIF2AQ9BY44 585 aaKnown RBP19.36■□□□□ 0.69
CCDC78-201ENST00000293889 TMX1Q9H3N1 280 aa19.36■□□□□ 0.69
CCDC78-201ENST00000293889 CHST12Q9NRB3 414 aa19.36■□□□□ 0.69
CCDC78-201ENST00000293889 OGTO15294 1046 aa19.36■□□□□ 0.69
CCDC78-201ENST00000293889 NPTXRO95502 500 aa19.36■□□□□ 0.69
CCDC78-201ENST00000293889 EEF1GP26641 437 aaKnown RBP19.36■□□□□ 0.69
CCDC78-201ENST00000293889 SNRNP35Q16560 246 aaKnown RBP19.36■□□□□ 0.69
CCDC78-201ENST00000293889 CCDC40Q4G0X9 1142 aa19.36■□□□□ 0.69
CCDC78-201ENST00000293889 UBXN11Q5T124 520 aa19.36■□□□□ 0.69
CCDC78-201ENST00000293889 CRELD2Q6UXH1 353 aaPredicted RBP19.36■□□□□ 0.69
CCDC78-201ENST00000293889 KIAA1524Q8TCG1 905 aa19.36■□□□□ 0.69
CCDC78-201ENST00000293889 CCDC51Q96ER9 411 aa19.36■□□□□ 0.69
CCDC78-201ENST00000293889 BORCS6Q96GS4 357 aa19.36■□□□□ 0.69
CCDC78-201ENST00000293889 ADPGKQ9BRR6 497 aa19.36■□□□□ 0.69
CCDC78-201ENST00000293889 IFIH1Q9BYX4 1025 aaKnown RBP19.36■□□□□ 0.69
CCDC78-201ENST00000293889 PDCL3Q9H2J4 239 aa19.36■□□□□ 0.69
CCDC78-201ENST00000293889 KIAA1586Q9HCI6 787 aa19.36■□□□□ 0.69
CCDC78-201ENST00000293889 LDHAP00338 332 aaKnown RBP19.35■□□□□ 0.69
CCDC78-201ENST00000293889 ADRB2P07550 413 aa19.35■□□□□ 0.69
CCDC78-201ENST00000293889 CSF2RAP15509 400 aa19.35■□□□□ 0.69
CCDC78-201ENST00000293889 MARSP56192 900 aaKnown RBP19.35■□□□□ 0.69
CCDC78-201ENST00000293889 SPAG1Q07617 926 aa19.35■□□□□ 0.69
CCDC78-201ENST00000293889 DCAF4L1Q3SXM0 396 aa19.35■□□□□ 0.69
CCDC78-201ENST00000293889 FRMD5Q7Z6J6 570 aa19.35■□□□□ 0.69
CCDC78-201ENST00000293889 THNSL1Q8IYQ7 743 aa19.35■□□□□ 0.69
CCDC78-201ENST00000293889 CEP120Q8N960 986 aa19.35■□□□□ 0.69
CCDC78-201ENST00000293889 VWCEQ96DN2 955 aa19.35■□□□□ 0.69
CCDC78-201ENST00000293889 ARMCX3Q9UH62 379 aaPredicted RBP19.35■□□□□ 0.69
CCDC78-201ENST00000293889 LIMA1Q9UHB6 759 aaKnown RBP19.35■□□□□ 0.69
CCDC78-201ENST00000293889 MAPK13O15264 365 aa19.34■□□□□ 0.69
CCDC78-201ENST00000293889 MGEA5O60502 916 aa19.34■□□□□ 0.69
CCDC78-201ENST00000293889 CDC25BP30305 580 aa19.34■□□□□ 0.69
CCDC78-201ENST00000293889 TNFSF9P41273 254 aa19.34■□□□□ 0.69
CCDC78-201ENST00000293889 MTIF2P46199 727 aaKnown RBP19.34■□□□□ 0.69
CCDC78-201ENST00000293889 RANBP2P49792 3224 aaKnown RBP19.34■□□□□ 0.69
CCDC78-201ENST00000293889 OSTNP61366 133 aa19.34■□□□□ 0.69
CCDC78-201ENST00000293889 DSC3Q14574 896 aa19.34■□□□□ 0.69
CCDC78-201ENST00000293889 KRT31Q15323 416 aa19.34■□□□□ 0.69
CCDC78-201ENST00000293889 TWF2Q6IBS0 349 aaKnown RBP19.34■□□□□ 0.69
CCDC78-201ENST00000293889 APBB1IPQ7Z5R6 666 aaPredicted RBP19.34■□□□□ 0.69
CCDC78-201ENST00000293889 LBHD1Q9BQE6 289 aaPredicted RBP19.34■□□□□ 0.69
CCDC78-201ENST00000293889 UQCRHLA0A096LP55 91 aa19.33■□□□□ 0.69
CCDC78-201ENST00000293889 ZNF233A6NK53 670 aa19.33■□□□□ 0.69
CCDC78-201ENST00000293889 PARNO95453 639 aaKnown RBP19.33■□□□□ 0.69
CCDC78-201ENST00000293889 UQCRHP07919 91 aa19.33■□□□□ 0.69
CCDC78-201ENST00000293889 ZSCAN20P17040 1043 aaPredicted RBP19.33■□□□□ 0.69
CCDC78-201ENST00000293889 GTF2F1P35269 517 aaKnown RBP eCLIP19.33■□□□□ 0.69
CCDC78-201ENST00000293889 EPHB4P54760 987 aa19.33■□□□□ 0.69
CCDC78-201ENST00000293889 FANCCQ00597 558 aa19.33■□□□□ 0.69
CCDC78-201ENST00000293889 PLCB2Q00722 1185 aa19.33■□□□□ 0.69
CCDC78-201ENST00000293889 PLEKHG4Q58EX7 1191 aa19.33■□□□□ 0.69
CCDC78-201ENST00000293889 APTXQ7Z2E3 356 aaKnown RBP19.33■□□□□ 0.69
CCDC78-201ENST00000293889 TMEM192Q8IY95 271 aa19.33■□□□□ 0.69
CCDC78-201ENST00000293889 TMEM199Q8N511 208 aa19.33■□□□□ 0.69
CCDC78-201ENST00000293889 ANKRD20A12PQ8NF67 263 aa19.33■□□□□ 0.69
CCDC78-201ENST00000293889 MFSD14AQ96MC6 490 aa19.33■□□□□ 0.69
CCDC78-201ENST00000293889 GDF15Q99988 308 aa19.33■□□□□ 0.69
CCDC78-201ENST00000293889 TUBGCP2Q9BSJ2 902 aa19.33■□□□□ 0.69
CCDC78-201ENST00000293889 METTL14Q9HCE5 456 aaKnown RBP19.33■□□□□ 0.69
CCDC78-201ENST00000293889 TAB2Q9NYJ8 693 aa19.33■□□□□ 0.69
CCDC78-201ENST00000293889 CPSF3Q9UKF6 684 aaKnown RBP19.33■□□□□ 0.69
CCDC78-201ENST00000293889 LRRC10BA6NIK2 292 aa19.33■□□□□ 0.68
CCDC78-201ENST00000293889 CXCL10P02778 98 aa19.33■□□□□ 0.68
CCDC78-201ENST00000293889 STAG3L1P0CL83 205 aa19.33■□□□□ 0.68
CCDC78-201ENST00000293889 FPGSQ05932 587 aa19.33■□□□□ 0.68
CCDC78-201ENST00000293889 CYP24A1Q07973 514 aa19.33■□□□□ 0.68
CCDC78-201ENST00000293889 SARM1Q6SZW1 724 aa19.33■□□□□ 0.68
CCDC78-201ENST00000293889 TRIM59Q8IWR1 403 aa19.33■□□□□ 0.68
CCDC78-201ENST00000293889 MYRIPQ8NFW9 859 aa19.33■□□□□ 0.68
CCDC78-201ENST00000293889 ADAM2Q99965 735 aa19.33■□□□□ 0.68
CCDC78-201ENST00000293889 TRIM6Q9C030 488 aaPredicted RBP19.33■□□□□ 0.68
CCDC78-201ENST00000293889 KCNF1Q9H3M0 494 aa19.33■□□□□ 0.68
CCDC78-201ENST00000293889 RBAKQ9NYW8 714 aaPredicted RBP19.33■□□□□ 0.68
CCDC78-201ENST00000293889 SERPINC1P01008 464 aa19.32■□□□□ 0.68
CCDC78-201ENST00000293889 CLTAP09496 248 aa19.32■□□□□ 0.68
CCDC78-201ENST00000293889 GRM5P41594 1212 aa19.32■□□□□ 0.68
CCDC78-201ENST00000293889 COPB1P53618 953 aaKnown RBP19.32■□□□□ 0.68
CCDC78-201ENST00000293889 KYAT1Q16773 422 aa19.32■□□□□ 0.68
CCDC78-201ENST00000293889 INTS8Q75QN2 995 aaKnown RBP19.32■□□□□ 0.68
CCDC78-201ENST00000293889 C16orf59Q7L2K0 433 aa19.32■□□□□ 0.68
CCDC78-201ENST00000293889 MTERF4Q7Z6M4 381 aaKnown RBP19.32■□□□□ 0.68
CCDC78-201ENST00000293889 DBF4BQ8NFT6 615 aa19.32■□□□□ 0.68
CCDC78-201ENST00000293889 PLEKHO2Q8TD55 490 aa19.32■□□□□ 0.68
CCDC78-201ENST00000293889 NXF3Q9H4D5 531 aaKnown RBP19.32■□□□□ 0.68
CCDC78-201ENST00000293889 HES2Q9Y543 173 aa19.32■□□□□ 0.68
CCDC78-201ENST00000293889 KRT13P13646 458 aa19.31■□□□□ 0.68
CCDC78-201ENST00000293889 PRKCSHP14314 528 aaPredicted RBP19.31■□□□□ 0.68
CCDC78-201ENST00000293889 ZNF75DP51815 510 aa19.31■□□□□ 0.68
CCDC78-201ENST00000293889 WNT7BP56706 349 aa19.31■□□□□ 0.68
CCDC78-201ENST00000293889 BFSP1Q12934 665 aa19.31■□□□□ 0.68
CCDC78-201ENST00000293889 ENOX2Q16206 610 aaKnown RBP19.31■□□□□ 0.68
CCDC78-201ENST00000293889 TCTN1Q2MV58 587 aa19.31■□□□□ 0.68
CCDC78-201ENST00000293889 DEFB128Q7Z7B8 93 aa19.31■□□□□ 0.68
CCDC78-201ENST00000293889 RTN4RL1Q86UN2 441 aaPredicted RBP19.31■□□□□ 0.68
CCDC78-201ENST00000293889 SMG8Q8ND04 991 aaKnown RBP19.31■□□□□ 0.68
CCDC78-201ENST00000293889 SEPT8Q92599 483 aa19.31■□□□□ 0.68
CCDC78-201ENST00000293889 VPS16Q9H269 839 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms