RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 ORC4O43929 436 aa17.04■□□□□ 0.32
SSRP1-202ENST00000293880 CALB1P05937 261 aa17.04■□□□□ 0.32
SSRP1-202ENST00000293880 TYK2P29597 1187 aa17.04■□□□□ 0.32
SSRP1-202ENST00000293880 SULT1E1P49888 294 aa17.04■□□□□ 0.32
SSRP1-202ENST00000293880 NLRP10Q86W26 655 aa17.04■□□□□ 0.32
SSRP1-202ENST00000293880 FMR1NBQ8N0W7 255 aaPredicted RBP17.04■□□□□ 0.32
SSRP1-202ENST00000293880 SH3GLB2Q9NR46 395 aa17.04■□□□□ 0.32
SSRP1-202ENST00000293880 KNOP1Q1ED39 458 aaKnown RBP17.03■□□□□ 0.32
SSRP1-202ENST00000293880 LVRNQ6Q4G3 990 aa17.03■□□□□ 0.32
SSRP1-202ENST00000293880 OR6P1Q8NGX9 317 aa17.03■□□□□ 0.32
SSRP1-202ENST00000293880 GCOM2Q9BZD3 368 aaPredicted RBP17.03■□□□□ 0.32
SSRP1-202ENST00000293880 ASPSCR1Q9BZE9 553 aa17.03■□□□□ 0.32
SSRP1-202ENST00000293880 UBAP1Q9NZ09 502 aa17.03■□□□□ 0.32
SSRP1-202ENST00000293880 MAD2L2Q9UI95 211 aa17.03■□□□□ 0.32
SSRP1-202ENST00000293880 KCNA3P22001 575 aa17.03■□□□□ 0.32
SSRP1-202ENST00000293880 SESN2P58004 480 aaPredicted RBP17.03■□□□□ 0.32
SSRP1-202ENST00000293880 ANGPT1Q15389 498 aa17.03■□□□□ 0.32
SSRP1-202ENST00000293880 DEPDC1Q5TB30 811 aa17.03■□□□□ 0.32
SSRP1-202ENST00000293880 PLD3Q8IV08 490 aa17.03■□□□□ 0.32
SSRP1-202ENST00000293880 ZSCAN32Q9NX65 697 aa17.03■□□□□ 0.32
SSRP1-202ENST00000293880 CHMP2BQ9UQN3 213 aa17.03■□□□□ 0.32
SSRP1-202ENST00000293880 PFKFB3Q16875 520 aaPredicted RBP17.03■□□□□ 0.32
SSRP1-202ENST00000293880 SPDYAQ5MJ70 313 aa17.03■□□□□ 0.32
SSRP1-202ENST00000293880 ZNF302Q9NR11 478 aa17.03■□□□□ 0.32
SSRP1-202ENST00000293880 HOMEZQ8IX15 550 aa17.03■□□□□ 0.32
SSRP1-202ENST00000293880 TRABDQ9H4I3 376 aa17.03■□□□□ 0.32
SSRP1-202ENST00000293880 CNGB3Q9NQW8 809 aa17.03■□□□□ 0.32
SSRP1-202ENST00000293880 ADGRG1Q9Y653 693 aa17.03■□□□□ 0.32
SSRP1-202ENST00000293880 ADGBQ8N7X0 1667 aa17.03■□□□□ 0.32
SSRP1-202ENST00000293880 SLC44A4Q53GD3 710 aa17.03■□□□□ 0.32
SSRP1-202ENST00000293880 TEDDM1Q5T9Z0 273 aa17.03■□□□□ 0.32
SSRP1-202ENST00000293880 THEMIS2Q5TEJ8 643 aa17.03■□□□□ 0.32
SSRP1-202ENST00000293880 OMA1Q96E52 524 aa17.03■□□□□ 0.32
SSRP1-202ENST00000293880 LY9Q9HBG7 655 aa17.03■□□□□ 0.32
SSRP1-202ENST00000293880 PCMTD2Q9NV79 361 aa17.03■□□□□ 0.32
SSRP1-202ENST00000293880 TMCC1O94876 653 aa17.02■□□□□ 0.32
SSRP1-202ENST00000293880 GYS1P13807 737 aa17.02■□□□□ 0.32
SSRP1-202ENST00000293880 IFNA8P32881 189 aa17.02■□□□□ 0.32
SSRP1-202ENST00000293880 KRT72Q14CN4 511 aa17.02■□□□□ 0.32
SSRP1-202ENST00000293880 STXBP2Q15833 593 aa17.02■□□□□ 0.32
SSRP1-202ENST00000293880 TEX9Q8N6V9 391 aa17.02■□□□□ 0.32
SSRP1-202ENST00000293880 ZNF555Q8NEP9 628 aa17.02■□□□□ 0.32
SSRP1-202ENST00000293880 CAB39Q9Y376 341 aaPredicted RBP17.02■□□□□ 0.32
SSRP1-202ENST00000293880 CAV1Q03135 178 aa17.02■□□□□ 0.32
SSRP1-202ENST00000293880 ARL6IP4Q66PJ3 421 aaKnown RBP17.02■□□□□ 0.32
SSRP1-202ENST00000293880 TRIM8Q9BZR9 551 aa17.02■□□□□ 0.32
SSRP1-202ENST00000293880 STMN3Q9NZ72 180 aa17.02■□□□□ 0.32
SSRP1-202ENST00000293880 EMSYQ7Z589 1322 aa17.02■□□□□ 0.32
SSRP1-202ENST00000293880 CHRNA3P32297 505 aa17.02■□□□□ 0.32
SSRP1-202ENST00000293880 CDH6P55285 790 aa17.02■□□□□ 0.32
SSRP1-202ENST00000293880 EIF3EP60228 445 aaKnown RBP17.02■□□□□ 0.32
SSRP1-202ENST00000293880 NAALADL2Q58DX5 795 aa17.02■□□□□ 0.32
SSRP1-202ENST00000293880 IL31Q6EBC2 164 aa17.02■□□□□ 0.32
SSRP1-202ENST00000293880 ARL10Q8N8L6 244 aa17.02■□□□□ 0.32
SSRP1-202ENST00000293880 TMEM35BQ8NCS4 154 aa17.02■□□□□ 0.32
SSRP1-202ENST00000293880 YIPF2Q9BWQ6 316 aa17.02■□□□□ 0.32
SSRP1-202ENST00000293880 EML4Q9HC35 981 aaKnown RBP17.02■□□□□ 0.32
SSRP1-202ENST00000293880 LIMA1Q9UHB6 759 aaKnown RBP17.02■□□□□ 0.32
SSRP1-202ENST00000293880 MYO5CQ9NQX4 1742 aa17.02■□□□□ 0.31
SSRP1-202ENST00000293880 TDP2O95551 362 aa17.02■□□□□ 0.31
SSRP1-202ENST00000293880 IL10P22301 178 aa17.02■□□□□ 0.31
SSRP1-202ENST00000293880 TWF2Q6IBS0 349 aaKnown RBP17.02■□□□□ 0.31
SSRP1-202ENST00000293880 XXYLT1Q8NBI6 393 aa17.02■□□□□ 0.31
SSRP1-202ENST00000293880 MTBPQ96DY7 904 aa17.02■□□□□ 0.31
SSRP1-202ENST00000293880 PLEKHG1Q9ULL1 1385 aa17.02■□□□□ 0.31
SSRP1-202ENST00000293880 SPDYE5A6NIY4 337 aa17.01■□□□□ 0.31
SSRP1-202ENST00000293880 HUS1O60921 280 aa17.01■□□□□ 0.31
SSRP1-202ENST00000293880 ARIH2O95376 493 aa17.01■□□□□ 0.31
SSRP1-202ENST00000293880 SDC4P31431 198 aa17.01■□□□□ 0.31
SSRP1-202ENST00000293880 CPA2P48052 419 aa17.01■□□□□ 0.31
SSRP1-202ENST00000293880 ALCAMQ13740 583 aa17.01■□□□□ 0.31
SSRP1-202ENST00000293880 SPDYE7PQ495Y7 208 aa17.01■□□□□ 0.31
SSRP1-202ENST00000293880 SYNE4Q8N205 404 aa17.01■□□□□ 0.31
SSRP1-202ENST00000293880 OR9Q1Q8NGQ5 310 aa17.01■□□□□ 0.31
SSRP1-202ENST00000293880 EPN3Q9H201 632 aa17.01■□□□□ 0.31
SSRP1-202ENST00000293880 GABBR1Q9UBS5 961 aa17.01■□□□□ 0.31
SSRP1-202ENST00000293880 COPG1Q9Y678 874 aaKnown RBP17.01■□□□□ 0.31
SSRP1-202ENST00000293880 JAK3P52333 1124 aa17.01■□□□□ 0.31
SSRP1-202ENST00000293880 PLOD1Q02809 727 aaPredicted RBP17.01■□□□□ 0.31
SSRP1-202ENST00000293880 NBPF9Q3BBW0 867 aa17.01■□□□□ 0.31
SSRP1-202ENST00000293880 CC2D2BQ6DHV5 1058 aa17.01■□□□□ 0.31
SSRP1-202ENST00000293880 PLEKHM3Q6ZWE6 761 aa17.01■□□□□ 0.31
SSRP1-202ENST00000293880 ACAP3Q96P50 834 aa17.01■□□□□ 0.31
SSRP1-202ENST00000293880 TFR2Q9UP52 801 aa17.01■□□□□ 0.31
SSRP1-202ENST00000293880 MIF4GDA9UHW6 222 aaKnown RBP17.01■□□□□ 0.31
SSRP1-202ENST00000293880 TRIM16O95361 564 aa17.01■□□□□ 0.31
SSRP1-202ENST00000293880 LDHAP00338 332 aaKnown RBP17.01■□□□□ 0.31
SSRP1-202ENST00000293880 GUCY1A2P33402 732 aa17.01■□□□□ 0.31
SSRP1-202ENST00000293880 WASHC5Q12768 1159 aa17.01■□□□□ 0.31
SSRP1-202ENST00000293880 RMDN1Q96DB5 314 aa17.01■□□□□ 0.31
SSRP1-202ENST00000293880 WNT8AQ9H1J5 351 aa17.01■□□□□ 0.31
SSRP1-202ENST00000293880 INSRP06213 1382 aa17.01■□□□□ 0.31
SSRP1-202ENST00000293880 SCP2P22307 547 aa17.01■□□□□ 0.31
SSRP1-202ENST00000293880 PDXDC1Q6P996 788 aa17.01■□□□□ 0.31
SSRP1-202ENST00000293880 NDUFAF2Q8N183 169 aa17.01■□□□□ 0.31
SSRP1-202ENST00000293880 MORC2Q9Y6X9 1032 aaPredicted RBP17.01■□□□□ 0.31
SSRP1-202ENST00000293880 NLRP1Q9C000 1473 aa17.01■□□□□ 0.31
SSRP1-202ENST00000293880 ATMINO43313 823 aaPredicted RBP17.01■□□□□ 0.31
SSRP1-202ENST00000293880 MDH1P40925 334 aaKnown RBP17.01■□□□□ 0.31
SSRP1-202ENST00000293880 LRRC74AQ0VAA2 488 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms