RNA–Protein interactions for RNA: ENST00000285124.12

PPP4R1-201, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-201ENST00000285124 TRIM10Q9UDY6 481 aa10.63□□□□□ -0.71
PPP4R1-201ENST00000285124 PARP2Q9UGN5 583 aa10.63□□□□□ -0.71
PPP4R1-201ENST00000285124 GAS2O43903 313 aaKnown RBP10.62□□□□□ -0.71
PPP4R1-201ENST00000285124 CST3P01034 146 aaPredicted RBP10.62□□□□□ -0.71
PPP4R1-201ENST00000285124 GHRP10912 638 aa10.62□□□□□ -0.71
PPP4R1-201ENST00000285124 HSPA6P17066 643 aa10.62□□□□□ -0.71
PPP4R1-201ENST00000285124 EIF4BP23588 611 aaKnown RBP10.62□□□□□ -0.71
PPP4R1-201ENST00000285124 PTPROQ16827 1216 aa10.62□□□□□ -0.71
PPP4R1-201ENST00000285124 TAF3Q5VWG9 929 aa10.62□□□□□ -0.71
PPP4R1-201ENST00000285124 TWF2Q6IBS0 349 aaKnown RBP10.62□□□□□ -0.71
PPP4R1-201ENST00000285124 IQCEQ6IPM2 695 aa10.62□□□□□ -0.71
PPP4R1-201ENST00000285124 SCARA5Q6ZMJ2 495 aa10.62□□□□□ -0.71
PPP4R1-201ENST00000285124 TMEM139Q8IV31 216 aa10.62□□□□□ -0.71
PPP4R1-201ENST00000285124 SLC9A9Q8IVB4 645 aa10.62□□□□□ -0.71
PPP4R1-201ENST00000285124 REM2Q8IYK8 340 aaPredicted RBP10.62□□□□□ -0.71
PPP4R1-201ENST00000285124 ARID3AQ99856 593 aa10.62□□□□□ -0.71
PPP4R1-201ENST00000285124 MKNK1Q9BUB5 465 aa10.62□□□□□ -0.71
PPP4R1-201ENST00000285124 FZD8Q9H461 694 aa10.62□□□□□ -0.71
PPP4R1-201ENST00000285124 TMEM134Q9H6X4 195 aa10.62□□□□□ -0.71
PPP4R1-201ENST00000285124 SNTG2Q9NY99 539 aa10.62□□□□□ -0.71
PPP4R1-201ENST00000285124 NXF1Q9UBU9 619 aaKnown RBP10.62□□□□□ -0.71
PPP4R1-201ENST00000285124 ADAMTS1Q9UHI8 967 aa10.62□□□□□ -0.71
PPP4R1-201ENST00000285124 KCNG1Q9UIX4 513 aa10.62□□□□□ -0.71
PPP4R1-201ENST00000285124 GRIN2DO15399 1336 aa10.62□□□□□ -0.71
PPP4R1-201ENST00000285124 PHLPP2Q6ZVD8 1323 aa10.62□□□□□ -0.71
PPP4R1-201ENST00000285124 STAG3L1P0CL83 205 aa10.62□□□□□ -0.71
PPP4R1-201ENST00000285124 GARTP22102 1010 aa10.62□□□□□ -0.71
PPP4R1-201ENST00000285124 ACLYP53396 1101 aa10.62□□□□□ -0.71
PPP4R1-201ENST00000285124 C1QTNF8P60827 252 aa10.62□□□□□ -0.71
PPP4R1-201ENST00000285124 NCBP1Q09161 790 aaKnown RBP10.62□□□□□ -0.71
PPP4R1-201ENST00000285124 DRAP1Q14919 205 aaPredicted RBP10.62□□□□□ -0.71
PPP4R1-201ENST00000285124 SFMBT2Q5VUG0 894 aa10.62□□□□□ -0.71
PPP4R1-201ENST00000285124 ZC3H3Q8IXZ2 948 aaKnown RBP10.62□□□□□ -0.71
PPP4R1-201ENST00000285124 NUP58Q9BVL2 599 aa10.62□□□□□ -0.71
PPP4R1-201ENST00000285124 NHEJ1Q9H9Q4 299 aaPredicted RBP10.62□□□□□ -0.71
PPP4R1-201ENST00000285124 CACNG4Q9UBN1 327 aa10.62□□□□□ -0.71
PPP4R1-201ENST00000285124 CDY2AQ9Y6F7 541 aa10.62□□□□□ -0.71
PPP4R1-201ENST00000285124 STX10O60499 249 aa10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 GNAT1P11488 350 aa10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 KRT5P13647 590 aa10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 PIK3CAP42336 1068 aa10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 NAP1L1P55209 391 aaKnown RBP10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 MARSP56192 900 aaKnown RBP10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 GFPT1Q06210 699 aaPredicted RBP10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 KLHL30Q0D2K2 578 aa10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 ARHGEF6Q15052 776 aa10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 KRT39Q6A163 491 aa10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 MPZL3Q6UWV2 235 aa10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 DPH6Q7L8W6 267 aa10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 ADPGKQ9BRR6 497 aa10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 SENP6Q9GZR1 1112 aaPredicted RBP10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 RNF39Q9H2S5 420 aa10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 RPF1Q9H9Y2 349 aaKnown RBP10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 STARD7Q9NQZ5 370 aa10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 PRMT7Q9NVM4 692 aaPredicted RBP10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 PUF60Q9UHX1 559 aaKnown RBP10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 GUCA1BQ9UMX6 200 aa10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 M0QZ92 97 aa10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 FOXN3O00409 490 aaPredicted RBP10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 OGTO15294 1046 aa10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 ARHGAP6O43182 974 aa10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 TSPAN1O60635 241 aa10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 GPR32O75388 356 aa10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 TMEM191BP0C7N4 346 aa10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 CD58P19256 250 aa10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 SNX17Q15036 470 aa10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 CYP26C1Q6V0L0 522 aa10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 CCAR2Q8N163 923 aaKnown RBP10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 HVCN1Q96D96 273 aa10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 TTYH3Q9C0H2 523 aa10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 CCDC113Q9H0I3 377 aa10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 ARHGAP20Q9P2F6 1191 aa10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 GTF2IRD1Q9UHL9 959 aa10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 PPP2R2CQ9Y2T4 447 aa10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 NOC2LQ9Y3T9 749 aaKnown RBP10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 EPN1Q9Y6I3 576 aaPredicted RBP10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 DUSP10Q9Y6W6 482 aa10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 TRIP12Q14669 1992 aaPredicted RBP10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 ITIH6Q6UXX5 1313 aa10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 CASP8AP2Q9UKL3 1982 aa10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 LACTBL1A8MY62 500 aa10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 HAS3O00219 553 aa10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 PQBP1O60828 265 aaKnown RBP10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 HOXD8P13378 290 aaPredicted RBP10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 TNNT1P13805 278 aa10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 DNA2P51530 1060 aa10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 LBX1P52954 281 aa10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 ORC1Q13415 861 aa10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 TRIM14Q14142 442 aa10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 TDRD10Q5VZ19 366 aaKnown RBP10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 CDCA2Q69YH5 1023 aaPredicted RBP10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 PHLDB2Q86SQ0 1253 aa10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 EHBP1Q8NDI1 1231 aa10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 BAP1Q92560 729 aa10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 PANX2Q96RD6 677 aa10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 ADAMTS10Q9H324 1103 aa10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 NXF3Q9H4D5 531 aaKnown RBP10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 PDZD7Q9H5P4 517 aa10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 HAUS4Q9H6D7 363 aa10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 RAB20Q9NX57 234 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms