RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 SCN9AQ15858 1988 aa11.12□□□□□ -0.63
SKA1-201ENST00000285116 DDTLA6NHG4 134 aaPredicted RBP11.12□□□□□ -0.63
SKA1-201ENST00000285116 OAS1P00973 400 aaKnown RBP11.12□□□□□ -0.63
SKA1-201ENST00000285116 NPR1P16066 1061 aa11.12□□□□□ -0.63
SKA1-201ENST00000285116 DPEP1P16444 411 aa11.12□□□□□ -0.63
SKA1-201ENST00000285116 ATP2A2P16615 1042 aaKnown RBP11.12□□□□□ -0.63
SKA1-201ENST00000285116 COPS2P61201 443 aa11.12□□□□□ -0.63
SKA1-201ENST00000285116 LACTBP83111 547 aaPredicted RBP11.12□□□□□ -0.63
SKA1-201ENST00000285116 CETN1Q12798 172 aa11.12□□□□□ -0.63
SKA1-201ENST00000285116 BNIP1Q12981 228 aa11.12□□□□□ -0.63
SKA1-201ENST00000285116 SIX1Q15475 284 aaPredicted RBP11.12□□□□□ -0.63
SKA1-201ENST00000285116 ABCB5Q2M3G0 1257 aa11.12□□□□□ -0.63
SKA1-201ENST00000285116 ZC2HC1CQ53FD0 456 aaPredicted RBP11.12□□□□□ -0.63
SKA1-201ENST00000285116 SYDE1Q6ZW31 735 aaPredicted RBP11.12□□□□□ -0.63
SKA1-201ENST00000285116 KIAA0825Q8IV33 1275 aa11.12□□□□□ -0.63
SKA1-201ENST00000285116 TEX9Q8N6V9 391 aa11.12□□□□□ -0.63
SKA1-201ENST00000285116 PLCD4Q9BRC7 762 aa11.12□□□□□ -0.63
SKA1-201ENST00000285116 TAOK3Q9H2K8 898 aa11.12□□□□□ -0.63
SKA1-201ENST00000285116 AZI2Q9H6S1 392 aa11.12□□□□□ -0.63
SKA1-201ENST00000285116 LRRC19Q9H756 370 aa11.12□□□□□ -0.63
SKA1-201ENST00000285116 GOPCQ9HD26 462 aa11.12□□□□□ -0.63
SKA1-201ENST00000285116 ARHGEF3Q9NR81 526 aa11.12□□□□□ -0.63
SKA1-201ENST00000285116 TAS2R14Q9NYV8 317 aa11.12□□□□□ -0.63
SKA1-201ENST00000285116 NOCTQ9UK39 431 aaKnown RBP11.12□□□□□ -0.63
SKA1-201ENST00000285116 TLDC2A0PJX2 215 aa11.11□□□□□ -0.63
SKA1-201ENST00000285116 A6NHS1 94 aa11.11□□□□□ -0.63
SKA1-201ENST00000285116 FOXN3O00409 490 aaPredicted RBP11.11□□□□□ -0.63
SKA1-201ENST00000285116 PLSCR1O15162 318 aa11.11□□□□□ -0.63
SKA1-201ENST00000285116 RAD21O60216 631 aa11.11□□□□□ -0.63
SKA1-201ENST00000285116 TCEA3O75764 348 aa11.11□□□□□ -0.63
SKA1-201ENST00000285116 ZNF76P36508 570 aa11.11□□□□□ -0.63
SKA1-201ENST00000285116 RPL21P46778 160 aaKnown RBP11.11□□□□□ -0.63
SKA1-201ENST00000285116 ATP11AP98196 1134 aa11.11□□□□□ -0.63
SKA1-201ENST00000285116 LMNB2Q03252 620 aa11.11□□□□□ -0.63
SKA1-201ENST00000285116 AOC3Q16853 763 aa11.11□□□□□ -0.63
SKA1-201ENST00000285116 ANKRD20A2Q5SQ80 823 aa11.11□□□□□ -0.63
SKA1-201ENST00000285116 ANKRD20A1Q5TYW2 823 aa11.11□□□□□ -0.63
SKA1-201ENST00000285116 ANKRD20A3Q5VUR7 823 aa11.11□□□□□ -0.63
SKA1-201ENST00000285116 CHADLQ6NUI6 762 aa11.11□□□□□ -0.63
SKA1-201ENST00000285116 NIPA1Q7RTP0 329 aa11.11□□□□□ -0.63
SKA1-201ENST00000285116 FAM71AQ8IYT1 594 aa11.11□□□□□ -0.63
SKA1-201ENST00000285116 FBXO25Q8TCJ0 367 aa11.11□□□□□ -0.63
SKA1-201ENST00000285116 TRIM31Q9BZY9 425 aa11.11□□□□□ -0.63
SKA1-201ENST00000285116 ETAA1Q9NY74 926 aa11.11□□□□□ -0.63
SKA1-201ENST00000285116 WHRNQ9P202 907 aa11.11□□□□□ -0.63
SKA1-201ENST00000285116 UVRAGQ9P2Y5 699 aa11.11□□□□□ -0.63
SKA1-201ENST00000285116 SERPINA10Q9UK55 444 aa11.11□□□□□ -0.63
SKA1-201ENST00000285116 DBR1Q9UK59 544 aaKnown RBP11.11□□□□□ -0.63
SKA1-201ENST00000285116 PRR12Q9ULL5 1215 aa11.11□□□□□ -0.63
SKA1-201ENST00000285116 RIPK2O43353 540 aa11.11□□□□□ -0.63
SKA1-201ENST00000285116 WFS1O76024 890 aa11.11□□□□□ -0.63
SKA1-201ENST00000285116 SUN1O94901 812 aa11.11□□□□□ -0.63
SKA1-201ENST00000285116 SNUPNO95149 360 aaKnown RBP11.11□□□□□ -0.63
SKA1-201ENST00000285116 LYPLA2O95372 231 aa11.11□□□□□ -0.63
SKA1-201ENST00000285116 KRT13P13646 458 aa11.11□□□□□ -0.63
SKA1-201ENST00000285116 RBM5P52756 815 aaKnown RBP eCLIP11.11□□□□□ -0.63
SKA1-201ENST00000285116 IFI35P80217 286 aaPredicted RBP11.11□□□□□ -0.63
SKA1-201ENST00000285116 SF3A3Q12874 501 aaKnown RBP eCLIP11.11□□□□□ -0.63
SKA1-201ENST00000285116 COG2Q14746 738 aa11.11□□□□□ -0.63
SKA1-201ENST00000285116 PTPROQ16827 1216 aa11.11□□□□□ -0.63
SKA1-201ENST00000285116 SEL1L2Q5TEA6 688 aa11.11□□□□□ -0.63
SKA1-201ENST00000285116 STRIP1Q5VSL9 837 aa11.11□□□□□ -0.63
SKA1-201ENST00000285116 TAOK1Q7L7X3 1001 aa11.11□□□□□ -0.63
SKA1-201ENST00000285116 ERICH1Q86X53 443 aa11.11□□□□□ -0.63
SKA1-201ENST00000285116 SLC17A8Q8NDX2 589 aa11.11□□□□□ -0.63
SKA1-201ENST00000285116 CYP2W1Q8TAV3 490 aa11.11□□□□□ -0.63
SKA1-201ENST00000285116 RANBP17Q9H2T7 1088 aaKnown RBP11.11□□□□□ -0.63
SKA1-201ENST00000285116 BCAS3Q9H6U6 928 aa11.11□□□□□ -0.63
SKA1-201ENST00000285116 MTUS1Q9ULD2 1270 aa11.11□□□□□ -0.63
SKA1-201ENST00000285116 PASKQ96RG2 1323 aa11.1□□□□□ -0.63
SKA1-201ENST00000285116 ENO4A6NNW6 628 aa11.1□□□□□ -0.63
SKA1-201ENST00000285116 O00370 1275 aa11.1□□□□□ -0.63
SKA1-201ENST00000285116 AHCYL1O43865 530 aa11.1□□□□□ -0.63
SKA1-201ENST00000285116 FTLP02792 175 aaPredicted RBP11.1□□□□□ -0.63
SKA1-201ENST00000285116 FESP07332 822 aa11.1□□□□□ -0.63
SKA1-201ENST00000285116 KRT16P08779 473 aa11.1□□□□□ -0.63
SKA1-201ENST00000285116 COILP38432 576 aaPredicted RBP11.1□□□□□ -0.63
SKA1-201ENST00000285116 MSH2P43246 934 aa11.1□□□□□ -0.63
SKA1-201ENST00000285116 CNGA2Q16280 664 aa11.1□□□□□ -0.63
SKA1-201ENST00000285116 TTC27Q6P3X3 843 aa11.1□□□□□ -0.63
SKA1-201ENST00000285116 PALB2Q86YC2 1186 aa11.1□□□□□ -0.63
SKA1-201ENST00000285116 DAW1Q8N136 415 aa11.1□□□□□ -0.63
SKA1-201ENST00000285116 SPDYE1Q8NFV5 336 aaPredicted RBP11.1□□□□□ -0.63
SKA1-201ENST00000285116 PIGOQ8TEQ8 1089 aa11.1□□□□□ -0.63
SKA1-201ENST00000285116 PRCCQ92733 491 aaPredicted RBP11.1□□□□□ -0.63
SKA1-201ENST00000285116 GLG1Q92896 1179 aa11.1□□□□□ -0.63
SKA1-201ENST00000285116 UPF1Q92900 1129 aaKnown RBP eCLIP11.1□□□□□ -0.631e-16■■■■■ 31.7
SKA1-201ENST00000285116 MTFR1LQ9H019 292 aa11.1□□□□□ -0.63
SKA1-201ENST00000285116 ZFATQ9P243 1243 aa11.1□□□□□ -0.63
SKA1-201ENST00000285116 ABCB4P21439 1286 aa11.1□□□□□ -0.63
SKA1-201ENST00000285116 ALDH1B1P30837 517 aa11.1□□□□□ -0.63
SKA1-201ENST00000285116 MAN1A1P33908 653 aa11.1□□□□□ -0.63
SKA1-201ENST00000285116 GHRHRQ02643 423 aa11.1□□□□□ -0.63
SKA1-201ENST00000285116 CEP55Q53EZ4 464 aa11.1□□□□□ -0.63
SKA1-201ENST00000285116 ODR4Q5SWX8 454 aa11.1□□□□□ -0.63
SKA1-201ENST00000285116 C1orf220Q5T0J3 134 aa11.1□□□□□ -0.63
SKA1-201ENST00000285116 SLC13A5Q86YT5 568 aaPredicted RBP11.1□□□□□ -0.63
SKA1-201ENST00000285116 TPH2Q8IWU9 490 aa11.1□□□□□ -0.63
SKA1-201ENST00000285116 SPICE1Q8N0Z3 855 aa11.1□□□□□ -0.63
SKA1-201ENST00000285116 C18orf8Q96DM3 657 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms