RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 H2AFJQ9BTM1 129 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 MAN1C1Q9NR34 630 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 BATF3Q9NR55 127 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 PALD1Q9ULE6 856 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 DTNAQ9Y4J8 743 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 PNMA6EA0A0J9YXQ4 647 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 ERVV-2B6SEH9 535 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 MLNP12872 115 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 CYP27A1Q02318 531 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 LRRC74AQ0VAA2 488 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 ANKRD40Q6AI12 368 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 TWF2Q6IBS0 349 aaKnown RBP9.19□□□□□ -0.94
NIPBL-201ENST00000282516 KCTD1Q719H9 257 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 G2E3Q7L622 706 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 MLXIPLQ9NP71 852 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 SMARCAL1Q9NZC9 954 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 ADAM21Q9UKJ8 722 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 BCAMP50895 628 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 HSD17B4P51659 736 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 ACTN3Q08043 901 aaPredicted RBP9.19□□□□□ -0.94
NIPBL-201ENST00000282516 RCSD1Q6JBY9 416 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 SETD3Q86TU7 594 aaPredicted RBP9.19□□□□□ -0.94
NIPBL-201ENST00000282516 ZNF507Q8TCN5 953 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 DDI1Q8WTU0 396 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 KRT35Q92764 455 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 SPATA16Q9BXB7 569 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 CNGB3Q9NQW8 809 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 CFAP74Q9C0B2 1584 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 CLASP1Q7Z460 1538 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 GCP02774 474 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 ENO1P06733 434 aaKnown RBP9.19□□□□□ -0.94
NIPBL-201ENST00000282516 TALDO1P37837 337 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 NUP107P57740 925 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 FAM45BPQ6NSW5 357 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 ZNF544Q6NX49 715 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 MTERF3Q96E29 417 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 CNDP1Q96KN2 507 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 CARD9Q9H257 536 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 PDP2Q9P2J9 529 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 FAM187AA6NFU0 413 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 PLOD1Q02809 727 aaPredicted RBP9.19□□□□□ -0.94
NIPBL-201ENST00000282516 KDSRQ06136 332 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 C11orf88Q6PI97 169 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 TMA16Q96EY4 203 aaKnown RBP9.19□□□□□ -0.94
NIPBL-201ENST00000282516 CLEC4MQ9H2X3 399 aaPredicted RBP9.19□□□□□ -0.94
NIPBL-201ENST00000282516 ERAP1Q9NZ08 941 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 TJP2Q9UDY2 1190 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 TTC7AQ9ULT0 858 aaPredicted RBP9.19□□□□□ -0.94
NIPBL-201ENST00000282516 ZNF804BA4D1E1 1349 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 PDZK1P1A8MUH7 402 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 PPEF1O14829 653 aaPredicted RBP9.19□□□□□ -0.94
NIPBL-201ENST00000282516 FGAP02671 866 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 GYG1P46976 350 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 UBE3CQ15386 1083 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 PASD1Q8IV76 773 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 MYO9BQ13459 2157 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 TCP11X1B4DZS4 312 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 TRIM49P0CI25 452 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 TRIM49CP0CI26 452 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 AKT1P31749 480 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 CEBPAP49715 358 aaPredicted RBP9.19□□□□□ -0.94
NIPBL-201ENST00000282516 MAPRE1Q15691 268 aaKnown RBP9.19□□□□□ -0.94
NIPBL-201ENST00000282516 ATPAF2Q8N5M1 289 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 FAM45AQ8TCE6 357 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 OLFM1Q99784 485 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 PRRG3Q9BZD7 231 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 PIDD1Q9HB75 910 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 TSR3Q9UJK0 312 aaKnown RBP9.19□□□□□ -0.94
NIPBL-201ENST00000282516 CIAO1O76071 339 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 JAK1P23458 1154 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 NT5C2P49902 561 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 UBXN2AP68543 259 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 DSG1Q02413 1049 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 VEPH1Q14D04 833 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 NEK10Q6ZWH5 1172 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 FAM160B2Q86V87 743 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 UNC45AQ9H3U1 944 aa9.19□□□□□ -0.94
NIPBL-201ENST00000282516 TAF1DQ9H5J8 278 aaPredicted RBP9.19□□□□□ -0.94
NIPBL-201ENST00000282516 TNPO2O14787 897 aaKnown RBP9.18□□□□□ -0.94
NIPBL-201ENST00000282516 FKBP9O95302 570 aa9.18□□□□□ -0.94
NIPBL-201ENST00000282516 TERF2Q15554 542 aa9.18□□□□□ -0.94
NIPBL-201ENST00000282516 FKBP9P1Q75LS8 142 aa9.18□□□□□ -0.94
NIPBL-201ENST00000282516 BMP3P12645 472 aa9.18□□□□□ -0.94
NIPBL-201ENST00000282516 GPC3P51654 580 aa9.18□□□□□ -0.94
NIPBL-201ENST00000282516 CDK17Q00537 523 aa9.18□□□□□ -0.94
NIPBL-201ENST00000282516 INAQ16352 499 aa9.18□□□□□ -0.94
NIPBL-201ENST00000282516 HDAC6Q9UBN7 1215 aa9.18□□□□□ -0.94
NIPBL-201ENST00000282516 CDY2AQ9Y6F7 541 aa9.18□□□□□ -0.94
NIPBL-201ENST00000282516 CDY1Q9Y6F8 540 aa9.18□□□□□ -0.94
NIPBL-201ENST00000282516 CFAP99D6REC4 459 aa9.18□□□□□ -0.94
NIPBL-201ENST00000282516 SERPIND1P05546 499 aa9.18□□□□□ -0.94
NIPBL-201ENST00000282516 GUCA1AP43080 201 aaPredicted RBP9.18□□□□□ -0.94
NIPBL-201ENST00000282516 TRIM25Q14258 630 aaKnown RBP9.18□□□□□ -0.94
NIPBL-201ENST00000282516 CC2D1AQ6P1N0 951 aaPredicted RBP9.18□□□□□ -0.94
NIPBL-201ENST00000282516 PAGE5Q96GU1 130 aa9.18□□□□□ -0.94
NIPBL-201ENST00000282516 SERHL2Q9H4I8 314 aa9.18□□□□□ -0.94
NIPBL-201ENST00000282516 SERHLQ9NQF3 203 aa9.18□□□□□ -0.94
NIPBL-201ENST00000282516 ARHGEF38Q9NXL2 777 aa9.18□□□□□ -0.94
NIPBL-201ENST00000282516 VPS9D1Q9Y2B5 631 aa9.18□□□□□ -0.94
NIPBL-201ENST00000282516 MICAL3Q7RTP6 2002 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms