RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 DNAJC12Q9UKB3 198 aa14.42□□□□□ -0.1
ACER3-201ENST00000278544 CAPN11Q9UMQ6 739 aa14.42□□□□□ -0.1
ACER3-201ENST00000278544 RRN3P2A6NIE6 340 aa14.42□□□□□ -0.1
ACER3-201ENST00000278544 EXTL3O43909 919 aa14.42□□□□□ -0.1
ACER3-201ENST00000278544 ITGA7Q13683 1181 aa14.42□□□□□ -0.1
ACER3-201ENST00000278544 ZNF394Q53GI3 561 aa14.42□□□□□ -0.1
ACER3-201ENST00000278544 TAF3Q5VWG9 929 aa14.42□□□□□ -0.1
ACER3-201ENST00000278544 ZC3H3Q8IXZ2 948 aaKnown RBP14.42□□□□□ -0.1
ACER3-201ENST00000278544 SLC17A8Q8NDX2 589 aa14.42□□□□□ -0.1
ACER3-201ENST00000278544 H0YCG3 227 aa14.42□□□□□ -0.1
ACER3-201ENST00000278544 OFD1O75665 1012 aa14.42□□□□□ -0.1
ACER3-201ENST00000278544 HS1BP3Q53T59 392 aa14.42□□□□□ -0.1
ACER3-201ENST00000278544 GLT1D1Q96MS3 346 aa14.42□□□□□ -0.1
ACER3-201ENST00000278544 TTYH3Q9C0H2 523 aa14.42□□□□□ -0.1
ACER3-201ENST00000278544 SNTG2Q9NY99 539 aa14.42□□□□□ -0.1
ACER3-201ENST00000278544 CDY2AQ9Y6F7 541 aa14.42□□□□□ -0.1
ACER3-201ENST00000278544 MEIS3P2A8K0S8 358 aa14.41□□□□□ -0.1
ACER3-201ENST00000278544 TSPAN1O60635 241 aa14.41□□□□□ -0.1
ACER3-201ENST00000278544 HOXD8P13378 290 aaPredicted RBP14.41□□□□□ -0.1
ACER3-201ENST00000278544 ORC1Q13415 861 aa14.41□□□□□ -0.1
ACER3-201ENST00000278544 KLHDC7AQ5VTJ3 777 aa14.41□□□□□ -0.1
ACER3-201ENST00000278544 TWF2Q6IBS0 349 aaKnown RBP14.41□□□□□ -0.1
ACER3-201ENST00000278544 KATNAL1Q9BW62 490 aa14.41□□□□□ -0.1
ACER3-201ENST00000278544 GCOM2Q9BZD3 368 aaPredicted RBP14.41□□□□□ -0.1
ACER3-201ENST00000278544 RNF39Q9H2S5 420 aa14.41□□□□□ -0.1
ACER3-201ENST00000278544 FZD8Q9H461 694 aa14.41□□□□□ -0.1
ACER3-201ENST00000278544 NXF3Q9H4D5 531 aaKnown RBP14.41□□□□□ -0.1
ACER3-201ENST00000278544 GPR32O75388 356 aa14.41□□□□□ -0.1
ACER3-201ENST00000278544 STAG3L1P0CL83 205 aa14.41□□□□□ -0.1
ACER3-201ENST00000278544 EIF4BP23588 611 aaKnown RBP14.41□□□□□ -0.1
ACER3-201ENST00000278544 EIF4A3P38919 411 aaKnown RBP14.41□□□□□ -0.1
ACER3-201ENST00000278544 MPZL3Q6UWV2 235 aa14.41□□□□□ -0.1
ACER3-201ENST00000278544 SLC9A9Q8IVB4 645 aa14.41□□□□□ -0.1
ACER3-201ENST00000278544 C2orf40Q9H1Z8 148 aa14.41□□□□□ -0.1
ACER3-201ENST00000278544 NXF1Q9UBU9 619 aaKnown RBP14.41□□□□□ -0.1
ACER3-201ENST00000278544 LOXHD1Q8IVV2 1947 aa14.41□□□□□ -0.1
ACER3-201ENST00000278544 AKR1B10O60218 316 aa14.41□□□□□ -0.1
ACER3-201ENST00000278544 CST3P01034 146 aaPredicted RBP14.41□□□□□ -0.1
ACER3-201ENST00000278544 IGHA2P01877 340 aa14.41□□□□□ -0.1
ACER3-201ENST00000278544 PIK3CAP42336 1068 aa14.41□□□□□ -0.1
ACER3-201ENST00000278544 LBX1P52954 281 aa14.41□□□□□ -0.1
ACER3-201ENST00000278544 MARSP56192 900 aaKnown RBP14.41□□□□□ -0.1
ACER3-201ENST00000278544 ZBED6P86452 979 aa14.41□□□□□ -0.1
ACER3-201ENST00000278544 GFPT1Q06210 699 aaPredicted RBP14.41□□□□□ -0.1
ACER3-201ENST00000278544 DRAP1Q14919 205 aaPredicted RBP14.41□□□□□ -0.1
ACER3-201ENST00000278544 SNX17Q15036 470 aa14.41□□□□□ -0.1
ACER3-201ENST00000278544 CDCA2Q69YH5 1023 aaPredicted RBP14.41□□□□□ -0.1
ACER3-201ENST00000278544 PDZD7Q9H5P4 517 aa14.41□□□□□ -0.1
ACER3-201ENST00000278544 TMEM134Q9H6X4 195 aa14.41□□□□□ -0.1
ACER3-201ENST00000278544 STARD7Q9NQZ5 370 aa14.41□□□□□ -0.1
ACER3-201ENST00000278544 PARP2Q9UGN5 583 aa14.41□□□□□ -0.1
ACER3-201ENST00000278544 CHORDC1Q9UHD1 332 aaPredicted RBP14.41□□□□□ -0.1
ACER3-201ENST00000278544 GTF2IRD1Q9UHL9 959 aa14.41□□□□□ -0.1
ACER3-201ENST00000278544 NOC2LQ9Y3T9 749 aaKnown RBP14.41□□□□□ -0.1
ACER3-201ENST00000278544 UMODL1Q5DID0 1318 aa14.41□□□□□ -0.1
ACER3-201ENST00000278544 HAS3O00219 553 aa14.4□□□□□ -0.1
ACER3-201ENST00000278544 PQBP1O60828 265 aaKnown RBP14.4□□□□□ -0.1
ACER3-201ENST00000278544 CD58P19256 250 aa14.4□□□□□ -0.1
ACER3-201ENST00000278544 GARTP22102 1010 aa14.4□□□□□ -0.1
ACER3-201ENST00000278544 LHX8Q68G74 356 aa14.4□□□□□ -0.1
ACER3-201ENST00000278544 DPH6Q7L8W6 267 aa14.4□□□□□ -0.1
ACER3-201ENST00000278544 BAP1Q92560 729 aa14.4□□□□□ -0.1
ACER3-201ENST00000278544 MKNK1Q9BUB5 465 aa14.4□□□□□ -0.1
ACER3-201ENST00000278544 SENP6Q9GZR1 1112 aaPredicted RBP14.4□□□□□ -0.1
ACER3-201ENST00000278544 NHEJ1Q9H9Q4 299 aaPredicted RBP14.4□□□□□ -0.1
ACER3-201ENST00000278544 ARHGAP20Q9P2F6 1191 aa14.4□□□□□ -0.1
ACER3-201ENST00000278544 ADAMTS1Q9UHI8 967 aa14.4□□□□□ -0.1
ACER3-201ENST00000278544 GAS2O43903 313 aaKnown RBP14.4□□□□□ -0.1
ACER3-201ENST00000278544 NFICP08651 508 aa14.4□□□□□ -0.1
ACER3-201ENST00000278544 KRT5P13647 590 aa14.4□□□□□ -0.1
ACER3-201ENST00000278544 AMHR2Q16671 573 aa14.4□□□□□ -0.1
ACER3-201ENST00000278544 TDRD10Q5VZ19 366 aaKnown RBP14.4□□□□□ -0.1
ACER3-201ENST00000278544 REM2Q8IYK8 340 aaPredicted RBP14.4□□□□□ -0.1
ACER3-201ENST00000278544 LINC01465Q8N7H1 131 aa14.4□□□□□ -0.1
ACER3-201ENST00000278544 LPPQ93052 612 aa14.4□□□□□ -0.1
ACER3-201ENST00000278544 CCDC42Q96M95 316 aa14.4□□□□□ -0.1
ACER3-201ENST00000278544 ADAMTS10Q9H324 1103 aa14.4□□□□□ -0.1
ACER3-201ENST00000278544 SIX2Q9NPC8 291 aa14.4□□□□□ -0.1
ACER3-201ENST00000278544 PRMT7Q9NVM4 692 aaPredicted RBP14.4□□□□□ -0.1
ACER3-201ENST00000278544 DUSP10Q9Y6W6 482 aa14.4□□□□□ -0.1
ACER3-201ENST00000278544 ITIH6Q6UXX5 1313 aa14.4□□□□□ -0.1
ACER3-201ENST00000278544 FOXN3O00409 490 aaPredicted RBP14.4□□□□□ -0.1
ACER3-201ENST00000278544 OGTO15294 1046 aa14.4□□□□□ -0.1
ACER3-201ENST00000278544 ASAP2O43150 1006 aa14.4□□□□□ -0.1
ACER3-201ENST00000278544 SFMBT2Q5VUG0 894 aa14.4□□□□□ -0.1
ACER3-201ENST00000278544 SLFN12LQ6IEE8 588 aa14.4□□□□□ -0.1
ACER3-201ENST00000278544 PHLDB2Q86SQ0 1253 aa14.4□□□□□ -0.1
ACER3-201ENST00000278544 EXOC8Q8IYI6 725 aa14.4□□□□□ -0.1
ACER3-201ENST00000278544 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.4□□□□□ -0.1
ACER3-201ENST00000278544 PPP2R2CQ9Y2T4 447 aa14.4□□□□□ -0.1
ACER3-201ENST00000278544 DNA2P51530 1060 aa14.39□□□□□ -0.11
ACER3-201ENST00000278544 IRF5Q13568 498 aa14.39□□□□□ -0.11
ACER3-201ENST00000278544 KRT39Q6A163 491 aa14.39□□□□□ -0.11
ACER3-201ENST00000278544 CCAR2Q8N163 923 aaKnown RBP14.39□□□□□ -0.11
ACER3-201ENST00000278544 HVCN1Q96D96 273 aa14.39□□□□□ -0.11
ACER3-201ENST00000278544 GANQ9H2C0 597 aa14.39□□□□□ -0.11
ACER3-201ENST00000278544 RPF1Q9H9Y2 349 aaKnown RBP14.39□□□□□ -0.11
ACER3-201ENST00000278544 PUF60Q9UHX1 559 aaKnown RBP14.39□□□□□ -0.11
ACER3-201ENST00000278544 GUCA1BQ9UMX6 200 aa14.39□□□□□ -0.11
ACER3-201ENST00000278544 LACTBL1A8MY62 500 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms