RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 MATR3P43243 847 aaKnown RBP eCLIP10.35□□□□□ -0.75
TRIM55-201ENST00000276573 WNT7BP56706 349 aa10.35□□□□□ -0.75
TRIM55-201ENST00000276573 CDCA2Q69YH5 1023 aaPredicted RBP10.35□□□□□ -0.75
TRIM55-201ENST00000276573 SLFN11Q7Z7L1 901 aa10.35□□□□□ -0.75
TRIM55-201ENST00000276573 RPUSD2Q8IZ73 545 aaKnown RBP10.35□□□□□ -0.75
TRIM55-201ENST00000276573 LRRC71Q8N4P6 559 aa10.35□□□□□ -0.75
TRIM55-201ENST00000276573 MMGT1Q8N4V1 131 aa10.35□□□□□ -0.75
TRIM55-201ENST00000276573 HNRNPLLQ8WVV9 542 aaKnown RBP10.35□□□□□ -0.75
TRIM55-201ENST00000276573 PSMB7Q99436 277 aa10.35□□□□□ -0.75
TRIM55-201ENST00000276573 ACO2Q99798 780 aaKnown RBP10.35□□□□□ -0.75
TRIM55-201ENST00000276573 ISCUQ9H1K1 167 aa10.35□□□□□ -0.75
TRIM55-201ENST00000276573 RNPEPQ9H4A4 650 aa10.35□□□□□ -0.75
TRIM55-201ENST00000276573 PDE11AQ9HCR9 933 aa10.35□□□□□ -0.75
TRIM55-201ENST00000276573 TAS2R14Q9NYV8 317 aa10.35□□□□□ -0.75
TRIM55-201ENST00000276573 SUCLA2Q9P2R7 463 aaPredicted RBP10.35□□□□□ -0.75
TRIM55-201ENST00000276573 TRPC6Q9Y210 931 aa10.35□□□□□ -0.75
TRIM55-201ENST00000276573 ANKRD62A6NC57 917 aa10.34□□□□□ -0.75
TRIM55-201ENST00000276573 SPDYE4A6NLX3 237 aa10.34□□□□□ -0.75
TRIM55-201ENST00000276573 TTLL13PA6NNM8 815 aa10.34□□□□□ -0.75
TRIM55-201ENST00000276573 ASAP2O43150 1006 aa10.34□□□□□ -0.75
TRIM55-201ENST00000276573 CYP26A1O43174 497 aa10.34□□□□□ -0.75
TRIM55-201ENST00000276573 SNAI1O95863 264 aaPredicted RBP10.34□□□□□ -0.75
TRIM55-201ENST00000276573 RPS6KA1Q15418 735 aa10.34□□□□□ -0.75
TRIM55-201ENST00000276573 ZACNQ401N2 412 aa10.34□□□□□ -0.75
TRIM55-201ENST00000276573 ZNF484Q5JVG2 852 aa10.34□□□□□ -0.75
TRIM55-201ENST00000276573 ZBTB41Q5SVQ8 909 aa10.34□□□□□ -0.75
TRIM55-201ENST00000276573 GJC2Q5T442 439 aaPredicted RBP10.34□□□□□ -0.75
TRIM55-201ENST00000276573 ENOSF1Q7L5Y1 443 aa10.34□□□□□ -0.75
TRIM55-201ENST00000276573 NOP9Q86U38 636 aaKnown RBP10.34□□□□□ -0.75
TRIM55-201ENST00000276573 PALB2Q86YC2 1186 aa10.34□□□□□ -0.75
TRIM55-201ENST00000276573 ZBTB8OSQ8IWT0 167 aa10.34□□□□□ -0.75
TRIM55-201ENST00000276573 RNF149Q8NC42 400 aa10.34□□□□□ -0.75
TRIM55-201ENST00000276573 SPATA4Q8NEY3 305 aa10.34□□□□□ -0.75
TRIM55-201ENST00000276573 SLC35G2Q8TBE7 412 aa10.34□□□□□ -0.75
TRIM55-201ENST00000276573 TRAPPC12Q8WVT3 735 aa10.34□□□□□ -0.75
TRIM55-201ENST00000276573 FAM81BQ96LP2 452 aa10.34□□□□□ -0.75
TRIM55-201ENST00000276573 MRPL4Q9BYD3 311 aaKnown RBP10.34□□□□□ -0.75
TRIM55-201ENST00000276573 KATNBL1Q9H079 304 aa10.34□□□□□ -0.75
TRIM55-201ENST00000276573 ARFGAP3Q9NP61 516 aa10.34□□□□□ -0.75
TRIM55-201ENST00000276573 SEPT11Q9NVA2 429 aaKnown RBP10.34□□□□□ -0.75
TRIM55-201ENST00000276573 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.34□□□□□ -0.75
TRIM55-201ENST00000276573 RBAKQ9NYW8 714 aaPredicted RBP10.34□□□□□ -0.75
TRIM55-201ENST00000276573 ERAP1Q9NZ08 941 aa10.34□□□□□ -0.75
TRIM55-201ENST00000276573 NOCTQ9UK39 431 aaKnown RBP10.34□□□□□ -0.75
TRIM55-201ENST00000276573 STXBP5LQ9Y2K9 1186 aa10.34□□□□□ -0.75
TRIM55-201ENST00000276573 SIP14410 1827 aa10.34□□□□□ -0.75
TRIM55-201ENST00000276573 MCM3APO60318 1980 aa10.34□□□□□ -0.75
TRIM55-201ENST00000276573 NCANO14594 1321 aa10.34□□□□□ -0.75
TRIM55-201ENST00000276573 CNTNAP2Q9UHC6 1331 aa10.34□□□□□ -0.75
TRIM55-201ENST00000276573 CLDN3O15551 220 aa10.34□□□□□ -0.75
TRIM55-201ENST00000276573 RTN2O75298 545 aa10.34□□□□□ -0.75
TRIM55-201ENST00000276573 TOM1L1O75674 476 aa10.34□□□□□ -0.75
TRIM55-201ENST00000276573 KIF4AO95239 1232 aa10.34□□□□□ -0.75
TRIM55-201ENST00000276573 HLA-DRAP01903 254 aa10.34□□□□□ -0.75
TRIM55-201ENST00000276573 FTLP02792 175 aaPredicted RBP10.34□□□□□ -0.75
TRIM55-201ENST00000276573 GZMAP12544 262 aa10.34□□□□□ -0.75
TRIM55-201ENST00000276573 GCNT1Q02742 428 aa10.34□□□□□ -0.75
TRIM55-201ENST00000276573 CFAP221Q4G0U5 840 aa10.34□□□□□ -0.75
TRIM55-201ENST00000276573 CCDC181Q5TID7 509 aa10.34□□□□□ -0.75
TRIM55-201ENST00000276573 LMBRD2Q68DH5 695 aaPredicted RBP10.34□□□□□ -0.75
TRIM55-201ENST00000276573 EFCAB12Q6NXP0 572 aa10.34□□□□□ -0.75
TRIM55-201ENST00000276573 WDR93Q6P2C0 686 aa10.34□□□□□ -0.75
TRIM55-201ENST00000276573 GPR142Q7Z601 462 aa10.34□□□□□ -0.75
TRIM55-201ENST00000276573 DPP9Q86TI2 863 aa10.34□□□□□ -0.75
TRIM55-201ENST00000276573 RHPN2Q8IUC4 686 aa10.34□□□□□ -0.75
TRIM55-201ENST00000276573 EPS8L1Q8TE68 723 aa10.34□□□□□ -0.75
TRIM55-201ENST00000276573 CTNNBL1Q8WYA6 563 aaPredicted RBP10.34□□□□□ -0.75
TRIM55-201ENST00000276573 RFFLQ8WZ73 363 aa10.34□□□□□ -0.75
TRIM55-201ENST00000276573 EMID1Q96A84 441 aaPredicted RBP10.34□□□□□ -0.75
TRIM55-201ENST00000276573 ELMO3Q96BJ8 720 aa10.34□□□□□ -0.75
TRIM55-201ENST00000276573 MS4A14Q96JA4 679 aa10.34□□□□□ -0.75
TRIM55-201ENST00000276573 FAM84AQ96KN4 292 aa10.34□□□□□ -0.75
TRIM55-201ENST00000276573 PCDHB18PQ96TA0 734 aa10.34□□□□□ -0.75
TRIM55-201ENST00000276573 CGRRF1Q99675 332 aa10.34□□□□□ -0.75
TRIM55-201ENST00000276573 PI4K2AQ9BTU6 479 aa10.34□□□□□ -0.75
TRIM55-201ENST00000276573 C2orf40Q9H1Z8 148 aa10.34□□□□□ -0.75
TRIM55-201ENST00000276573 ANKFY1Q9P2R3 1169 aa10.34□□□□□ -0.75
TRIM55-201ENST00000276573 TARSL2A2RTX5 802 aaKnown RBP10.33□□□□□ -0.76
TRIM55-201ENST00000276573 CES2O00748 559 aa10.33□□□□□ -0.76
TRIM55-201ENST00000276573 VNN1O95497 513 aa10.33□□□□□ -0.76
TRIM55-201ENST00000276573 LGALS2P05162 132 aa10.33□□□□□ -0.76
TRIM55-201ENST00000276573 PRKCBP05771 671 aa10.33□□□□□ -0.76
TRIM55-201ENST00000276573 INSRRP14616 1297 aa10.33□□□□□ -0.76
TRIM55-201ENST00000276573 ABCB4P21439 1286 aa10.33□□□□□ -0.76
TRIM55-201ENST00000276573 VSNL1P62760 191 aa10.33□□□□□ -0.76
TRIM55-201ENST00000276573 C2orf54Q08AI8 447 aa10.33□□□□□ -0.76
TRIM55-201ENST00000276573 TFDP1Q14186 410 aa10.33□□□□□ -0.76
TRIM55-201ENST00000276573 GRB14Q14449 540 aa10.33□□□□□ -0.76
TRIM55-201ENST00000276573 TCEAL1Q15170 157 aa10.33□□□□□ -0.76
TRIM55-201ENST00000276573 MAPK6Q16659 721 aa10.33□□□□□ -0.76
TRIM55-201ENST00000276573 WDR44Q5JSH3 913 aa10.33□□□□□ -0.76
TRIM55-201ENST00000276573 TDRD10Q5VZ19 366 aaKnown RBP10.33□□□□□ -0.76
TRIM55-201ENST00000276573 CST9Q5W186 159 aa10.33□□□□□ -0.76
TRIM55-201ENST00000276573 PLEKHH3Q7Z736 793 aa10.33□□□□□ -0.76
TRIM55-201ENST00000276573 SLC47A2Q86VL8 602 aa10.33□□□□□ -0.76
TRIM55-201ENST00000276573 SYCE1Q8N0S2 351 aa10.33□□□□□ -0.76
TRIM55-201ENST00000276573 AFG1LQ8WV93 481 aa10.33□□□□□ -0.76
TRIM55-201ENST00000276573 TAF4BQ92750 862 aa10.33□□□□□ -0.76
TRIM55-201ENST00000276573 ARHGEF26Q96DR7 871 aa10.33□□□□□ -0.76
TRIM55-201ENST00000276573 PARK7Q99497 189 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms