RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 PTGDRQ13258 359 aa16.61■□□□□ 0.25
UBR3-201ENST00000272793 STX7O15400 261 aaKnown RBP16.61■□□□□ 0.25
UBR3-201ENST00000272793 ALDH1A2O94788 518 aa16.61■□□□□ 0.25
UBR3-201ENST00000272793 PLEKHA7Q6IQ23 1121 aa16.61■□□□□ 0.25
UBR3-201ENST00000272793 SNX31Q8N9S9 440 aa16.61■□□□□ 0.25
UBR3-201ENST00000272793 MRPL11Q9Y3B7 192 aaKnown RBP16.61■□□□□ 0.25
UBR3-201ENST00000272793 PDE5AO76074 875 aa16.61■□□□□ 0.25
UBR3-201ENST00000272793 SCRN3Q0VDG4 424 aa16.61■□□□□ 0.25
UBR3-201ENST00000272793 SPATA16Q9BXB7 569 aa16.61■□□□□ 0.25
UBR3-201ENST00000272793 H0YIN7 160 aa16.61■□□□□ 0.25
UBR3-201ENST00000272793 LRRC41Q15345 812 aa16.61■□□□□ 0.25
UBR3-201ENST00000272793 PPM1NQ8N819 430 aa16.61■□□□□ 0.25
UBR3-201ENST00000272793 ZNF274Q96GC6 653 aaPredicted RBP16.61■□□□□ 0.25
UBR3-201ENST00000272793 ZNF57Q68EA5 555 aaPredicted RBP16.6■□□□□ 0.25
UBR3-201ENST00000272793 ZNF614Q8N883 585 aa16.6■□□□□ 0.25
UBR3-201ENST00000272793 PANX2Q96RD6 677 aa16.6■□□□□ 0.25
UBR3-201ENST00000272793 NACC1Q96RE7 527 aa16.6■□□□□ 0.25
UBR3-201ENST00000272793 TRIM51Q9BSJ1 452 aa16.6■□□□□ 0.25
UBR3-201ENST00000272793 CYP26B1Q9NR63 512 aa16.6■□□□□ 0.25
UBR3-201ENST00000272793 MRGBPQ9NV56 204 aa16.6■□□□□ 0.25
UBR3-201ENST00000272793 PODXLO00592 558 aa16.6■□□□□ 0.25
UBR3-201ENST00000272793 CAND2O75155 1236 aa16.6■□□□□ 0.25
UBR3-201ENST00000272793 ARFIP2P53365 341 aa16.6■□□□□ 0.25
UBR3-201ENST00000272793 CEBPGP53567 150 aa16.6■□□□□ 0.25
UBR3-201ENST00000272793 GAL3ST3Q96A11 431 aa16.6■□□□□ 0.25
UBR3-201ENST00000272793 SLC25A13Q9UJS0 675 aa16.6■□□□□ 0.25
UBR3-201ENST00000272793 PHLPP2Q6ZVD8 1323 aa16.6■□□□□ 0.25
UBR3-201ENST00000272793 MYH15Q9Y2K3 1946 aa16.6■□□□□ 0.25
UBR3-201ENST00000272793 PPIDQ08752 370 aaKnown RBP16.6■□□□□ 0.25
UBR3-201ENST00000272793 THOC7Q6I9Y2 204 aaKnown RBP16.6■□□□□ 0.25
UBR3-201ENST00000272793 PALB2Q86YC2 1186 aa16.6■□□□□ 0.25
UBR3-201ENST00000272793 PKP3Q9Y446 797 aa16.6■□□□□ 0.25
UBR3-201ENST00000272793 ACEP12821 1306 aa16.6■□□□□ 0.25
UBR3-201ENST00000272793 ASNA1O43681 348 aa16.6■□□□□ 0.25
UBR3-201ENST00000272793 RBM6P78332 1123 aaKnown RBP16.6■□□□□ 0.25
UBR3-201ENST00000272793 RSBN1Q5VWQ0 802 aaPredicted RBP16.6■□□□□ 0.25
UBR3-201ENST00000272793 YAF2Q8IY57 180 aa16.6■□□□□ 0.25
UBR3-201ENST00000272793 SCFD1Q8WVM8 642 aa16.6■□□□□ 0.25
UBR3-201ENST00000272793 CNDP1Q96KN2 507 aa16.6■□□□□ 0.25
UBR3-201ENST00000272793 AGRPO00253 132 aa16.6■□□□□ 0.25
UBR3-201ENST00000272793 PFKFB2O60825 505 aa16.6■□□□□ 0.25
UBR3-201ENST00000272793 USP1O94782 785 aa16.6■□□□□ 0.25
UBR3-201ENST00000272793 SNX4O95219 450 aa16.6■□□□□ 0.25
UBR3-201ENST00000272793 RHAGQ02094 409 aa16.6■□□□□ 0.25
UBR3-201ENST00000272793 CACNB1Q02641 598 aaPredicted RBP16.6■□□□□ 0.25
UBR3-201ENST00000272793 ZNF284Q2VY69 593 aa16.6■□□□□ 0.25
UBR3-201ENST00000272793 KLC4Q9NSK0 619 aa16.6■□□□□ 0.25
UBR3-201ENST00000272793 CTNNAL1Q9UBT7 734 aa16.6■□□□□ 0.25
UBR3-201ENST00000272793 DAB2IPQ5VWQ8 1189 aa16.6■□□□□ 0.25
UBR3-201ENST00000272793 SGSM2O43147 1006 aa16.59■□□□□ 0.25
UBR3-201ENST00000272793 NCAM1P13591 858 aa16.59■□□□□ 0.25
UBR3-201ENST00000272793 GGCXP38435 758 aa16.59■□□□□ 0.25
UBR3-201ENST00000272793 MKRN3Q13064 507 aaKnown RBP16.59■□□□□ 0.25
UBR3-201ENST00000272793 PLA2G4DQ86XP0 818 aa16.59■□□□□ 0.25
UBR3-201ENST00000272793 BLIDQ8IZY5 108 aa16.59■□□□□ 0.25
UBR3-201ENST00000272793 SLC17A8Q8NDX2 589 aa16.59■□□□□ 0.25
UBR3-201ENST00000272793 IL17RAQ96F46 866 aa16.59■□□□□ 0.25
UBR3-201ENST00000272793 FAM192AQ9GZU8 254 aa16.59■□□□□ 0.25
UBR3-201ENST00000272793 PCDHA7Q9UN72 937 aa16.59■□□□□ 0.25
UBR3-201ENST00000272793 GTPBP6O43824 516 aaPredicted RBP16.59■□□□□ 0.25
UBR3-201ENST00000272793 SRGAP2O75044 1071 aa16.59■□□□□ 0.25
UBR3-201ENST00000272793 HPGDP15428 266 aa16.59■□□□□ 0.25
UBR3-201ENST00000272793 TYW3Q6IPR3 259 aaKnown RBP16.59■□□□□ 0.25
UBR3-201ENST00000272793 GRAMD1CQ8IYS0 662 aa16.59■□□□□ 0.25
UBR3-201ENST00000272793 LRRC47Q8N1G4 583 aaKnown RBP16.59■□□□□ 0.25
UBR3-201ENST00000272793 NPHS2Q9NP85 383 aa16.59■□□□□ 0.25
UBR3-201ENST00000272793 RTN3O95197 1032 aaPredicted RBP16.59■□□□□ 0.25
UBR3-201ENST00000272793 DPP8Q6V1X1 898 aaPredicted RBP16.59■□□□□ 0.25
UBR3-201ENST00000272793 MNTQ99583 582 aa16.59■□□□□ 0.25
UBR3-201ENST00000272793 NRDE2Q9H7Z3 1164 aa16.59■□□□□ 0.25
UBR3-201ENST00000272793 GPS1Q13098 491 aa16.59■□□□□ 0.25
UBR3-201ENST00000272793 RBBP8NLQ8NC74 664 aaPredicted RBP16.59■□□□□ 0.25
UBR3-201ENST00000272793 EDC3Q96F86 508 aaKnown RBP16.59■□□□□ 0.25
UBR3-201ENST00000272793 MORC2Q9Y6X9 1032 aaPredicted RBP16.59■□□□□ 0.25
UBR3-201ENST00000272793 SCARA3Q6AZY7 606 aa16.59■□□□□ 0.25
UBR3-201ENST00000272793 LAYNQ6UX15 382 aa16.59■□□□□ 0.25
UBR3-201ENST00000272793 NUDT18Q6ZVK8 323 aa16.59■□□□□ 0.25
UBR3-201ENST00000272793 NIM1KQ8IY84 436 aa16.59■□□□□ 0.25
UBR3-201ENST00000272793 CNBD1Q8NA66 436 aa16.59■□□□□ 0.25
UBR3-201ENST00000272793 SUCLG2Q96I99 432 aa16.59■□□□□ 0.25
UBR3-201ENST00000272793 SEMA3DO95025 777 aa16.59■□□□□ 0.25
UBR3-201ENST00000272793 LONP2Q86WA8 852 aa16.59■□□□□ 0.25
UBR3-201ENST00000272793 ZNF577Q9BSK1 485 aa16.59■□□□□ 0.25
UBR3-201ENST00000272793 MAP3K13O43283 966 aa16.59■□□□□ 0.25
UBR3-201ENST00000272793 PABPC4Q13310 644 aaKnown RBP eCLIP16.59■□□□□ 0.25
UBR3-201ENST00000272793 LRRC14Q15048 493 aa16.59■□□□□ 0.25
UBR3-201ENST00000272793 ERICH1Q86X53 443 aa16.59■□□□□ 0.25
UBR3-201ENST00000272793 CACTIN-AS1Q8N1I8 211 aa16.59■□□□□ 0.25
UBR3-201ENST00000272793 OR6B3Q8NGW1 331 aa16.59■□□□□ 0.25
UBR3-201ENST00000272793 ATP8B1O43520 1251 aa16.58■□□□□ 0.25
UBR3-201ENST00000272793 UBTFL6P0CB48 400 aaPredicted RBP16.58■□□□□ 0.25
UBR3-201ENST00000272793 CHI3L1P36222 383 aaPredicted RBP16.58■□□□□ 0.25
UBR3-201ENST00000272793 LRRC24Q50LG9 513 aa16.58■□□□□ 0.25
UBR3-201ENST00000272793 GAS2L3Q86XJ1 694 aa16.58■□□□□ 0.25
UBR3-201ENST00000272793 SEC16BQ96JE7 1060 aa16.58■□□□□ 0.25
UBR3-201ENST00000272793 PRKD2Q9BZL6 878 aa16.58■□□□□ 0.25
UBR3-201ENST00000272793 GMEB1Q9Y692 573 aa16.58■□□□□ 0.25
UBR3-201ENST00000272793 SESN2P58004 480 aaPredicted RBP16.58■□□□□ 0.25
UBR3-201ENST00000272793 AP1S1P61966 158 aa16.58■□□□□ 0.25
UBR3-201ENST00000272793 ITGB3BPQ13352 177 aaPredicted RBP16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms