RNA–Protein interactions for RNA: ENST00000269361.11

CSNK1D-201, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 1,088 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-201ENST00000269361 SPATA31D3P0C874 917 aa19.31■□□□□ 0.68
CSNK1D-201ENST00000269361 MYBP10242 640 aa19.31■□□□□ 0.68
CSNK1D-201ENST00000269361 LIG1P18858 919 aa19.31■□□□□ 0.68
CSNK1D-201ENST00000269361 TOB1P50616 345 aaPredicted RBP19.31■□□□□ 0.68
CSNK1D-201ENST00000269361 TCF15Q12870 199 aa19.31■□□□□ 0.68
CSNK1D-201ENST00000269361 TUSC3Q13454 348 aa19.31■□□□□ 0.68
CSNK1D-201ENST00000269361 SPATA31D4Q6ZUB0 917 aa19.31■□□□□ 0.68
CSNK1D-201ENST00000269361 PALB2Q86YC2 1186 aa19.31■□□□□ 0.68
CSNK1D-201ENST00000269361 RIN2Q8WYP3 895 aaPredicted RBP19.31■□□□□ 0.68
CSNK1D-201ENST00000269361 IFT74Q96LB3 600 aa19.31■□□□□ 0.68
CSNK1D-201ENST00000269361 PAAF1Q9BRP4 392 aa19.31■□□□□ 0.68
CSNK1D-201ENST00000269361 RHOBTB2Q9BYZ6 727 aa19.31■□□□□ 0.68
CSNK1D-201ENST00000269361 POLD4Q9HCU8 107 aa19.31■□□□□ 0.68
CSNK1D-201ENST00000269361 FNIP2Q9P278 1114 aa19.31■□□□□ 0.68
CSNK1D-201ENST00000269361 CACNG4Q9UBN1 327 aa19.31■□□□□ 0.68
CSNK1D-201ENST00000269361 KIAA1024Q9UPX6 916 aa19.31■□□□□ 0.68
CSNK1D-201ENST00000269361 PTGESO14684 152 aa19.3■□□□□ 0.68
CSNK1D-201ENST00000269361 RECQL4O94761 1208 aa19.3■□□□□ 0.68
CSNK1D-201ENST00000269361 EDN1P05305 212 aa19.3■□□□□ 0.68
CSNK1D-201ENST00000269361 EFNA5P52803 228 aa19.3■□□□□ 0.68
CSNK1D-201ENST00000269361 PTGDRQ13258 359 aa19.3■□□□□ 0.68
CSNK1D-201ENST00000269361 C8orf34Q49A92 452 aa19.3■□□□□ 0.68
CSNK1D-201ENST00000269361 KIFAP3Q92845 792 aa19.3■□□□□ 0.68
CSNK1D-201ENST00000269361 ADPGKQ9BRR6 497 aa19.3■□□□□ 0.68
CSNK1D-201ENST00000269361 KIFC3Q9BVG8 833 aa19.3■□□□□ 0.68
CSNK1D-201ENST00000269361 PLEKHA4Q9H4M7 779 aa19.3■□□□□ 0.68
CSNK1D-201ENST00000269361 PCDHB6Q9Y5E3 794 aa19.3■□□□□ 0.68
CSNK1D-201ENST00000269361 STK24Q9Y6E0 443 aa19.3■□□□□ 0.68
CSNK1D-201ENST00000269361 SF3B1O75533 1304 aaKnown RBP eCLIP19.29■□□□□ 0.685e-6■■■■■ 52.7
CSNK1D-201ENST00000269361 CASTOR2A6NHX0 329 aa19.29■□□□□ 0.68
CSNK1D-201ENST00000269361 TGM5O43548 720 aa19.29■□□□□ 0.68
CSNK1D-201ENST00000269361 RFPL2O75678 378 aa19.29■□□□□ 0.68
CSNK1D-201ENST00000269361 THP07101 528 aa19.29■□□□□ 0.68
CSNK1D-201ENST00000269361 CREMQ03060 361 aa19.29■□□□□ 0.68
CSNK1D-201ENST00000269361 EEF1DP3Q658K8 133 aa19.29■□□□□ 0.68
CSNK1D-201ENST00000269361 LILRA6Q6PI73 481 aa19.29■□□□□ 0.68
CSNK1D-201ENST00000269361 IGSF22Q8N9C0 903 aa19.29■□□□□ 0.68
CSNK1D-201ENST00000269361 PHOX2BQ99453 314 aa19.29■□□□□ 0.68
CSNK1D-201ENST00000269361 RAB34Q9BZG1 259 aa19.29■□□□□ 0.68
CSNK1D-201ENST00000269361 CXCL16Q9H2A7 254 aa19.29■□□□□ 0.68
CSNK1D-201ENST00000269361 WDR6Q9NNW5 1121 aaKnown RBP19.29■□□□□ 0.68
CSNK1D-201ENST00000269361 DDX19AQ9NUU7 478 aaKnown RBP19.29■□□□□ 0.68
CSNK1D-201ENST00000269361 DAXXQ9UER7 740 aaPredicted RBP19.29■□□□□ 0.68
CSNK1D-201ENST00000269361 PAPLNO95428 1278 aa19.28■□□□□ 0.68
CSNK1D-201ENST00000269361 RPL17P18621 184 aaKnown RBP19.28■□□□□ 0.68
CSNK1D-201ENST00000269361 NUBP1P53384 320 aa19.28■□□□□ 0.68
CSNK1D-201ENST00000269361 TDGQ13569 410 aa19.28■□□□□ 0.68
CSNK1D-201ENST00000269361 NAB2Q15742 525 aa19.28■□□□□ 0.68
CSNK1D-201ENST00000269361 DCAF4L1Q3SXM0 396 aa19.28■□□□□ 0.68
CSNK1D-201ENST00000269361 RTP2Q5QGT7 225 aa19.28■□□□□ 0.68
CSNK1D-201ENST00000269361 NT5DC1Q5TFE4 455 aa19.28■□□□□ 0.68
CSNK1D-201ENST00000269361 GLYCTKQ8IVS8 523 aa19.28■□□□□ 0.68
CSNK1D-201ENST00000269361 SNX29Q8TEQ0 813 aa19.28■□□□□ 0.68
CSNK1D-201ENST00000269361 HASPINQ8TF76 798 aa19.28■□□□□ 0.68
CSNK1D-201ENST00000269361 SMG7Q92540 1137 aaKnown RBP19.28■□□□□ 0.68
CSNK1D-201ENST00000269361 STAMQ92783 540 aa19.28■□□□□ 0.68
CSNK1D-201ENST00000269361 ZNF707Q96C28 371 aaPredicted RBP19.28■□□□□ 0.68
CSNK1D-201ENST00000269361 NT5C3AQ9H0P0 336 aa19.28■□□□□ 0.68
CSNK1D-201ENST00000269361 KCNK12Q9HB15 430 aa19.28■□□□□ 0.68
CSNK1D-201ENST00000269361 GDAQ9Y2T3 454 aa19.28■□□□□ 0.68
CSNK1D-201ENST00000269361 ZDBF2Q9HCK1 2354 aa19.28■□□□□ 0.68
CSNK1D-201ENST00000269361 LAD1O00515 517 aa19.27■□□□□ 0.68
CSNK1D-201ENST00000269361 N4BP1O75113 896 aaKnown RBP19.27■□□□□ 0.68
CSNK1D-201ENST00000269361 KIF4AO95239 1232 aa19.27■□□□□ 0.68
CSNK1D-201ENST00000269361 ATF7IP2Q5U623 682 aa19.27■□□□□ 0.68
CSNK1D-201ENST00000269361 FAM171A1Q5VUB5 890 aa19.27■□□□□ 0.68
CSNK1D-201ENST00000269361 PRSS55Q6UWB4 352 aaPredicted RBP19.27■□□□□ 0.68
CSNK1D-201ENST00000269361 TTPALQ9BTX7 342 aa19.27■□□□□ 0.68
CSNK1D-201ENST00000269361 ZDHHC7Q9NXF8 308 aa19.27■□□□□ 0.68
CSNK1D-201ENST00000269361 DNM3Q9UQ16 869 aa19.27■□□□□ 0.68
CSNK1D-201ENST00000269361 CLUHO75153 1309 aa19.26■□□□□ 0.67
CSNK1D-201ENST00000269361 E9PMD0 336 aa19.26■□□□□ 0.67
CSNK1D-201ENST00000269361 K7ERI5 159 aa19.26■□□□□ 0.67
CSNK1D-201ENST00000269361 GBP2P32456 591 aaPredicted RBP19.26■□□□□ 0.67
CSNK1D-201ENST00000269361 IL17AQ16552 155 aa19.26■□□□□ 0.67
CSNK1D-201ENST00000269361 KRT79Q5XKE5 535 aa19.26■□□□□ 0.67
CSNK1D-201ENST00000269361 APBB1IPQ7Z5R6 666 aaPredicted RBP19.26■□□□□ 0.67
CSNK1D-201ENST00000269361 CEP57Q86XR8 500 aa19.26■□□□□ 0.67
CSNK1D-201ENST00000269361 PIK3R5Q8WYR1 880 aa19.26■□□□□ 0.67
CSNK1D-201ENST00000269361 PRKD2Q9BZL6 878 aa19.26■□□□□ 0.67
CSNK1D-201ENST00000269361 IRF2BPLQ9H1B7 796 aa19.26■□□□□ 0.67
CSNK1D-201ENST00000269361 MFSD1Q9H3U5 465 aa19.26■□□□□ 0.67
CSNK1D-201ENST00000269361 PIDD1Q9HB75 910 aa19.26■□□□□ 0.67
CSNK1D-201ENST00000269361 IGSF9Q9P2J2 1179 aa19.26■□□□□ 0.67
CSNK1D-201ENST00000269361 CCDC169A6NNP5 214 aa19.25■□□□□ 0.67
CSNK1D-201ENST00000269361 PP2D1A8MPX8 630 aa19.25■□□□□ 0.67
CSNK1D-201ENST00000269361 PRPHP41219 470 aa19.25■□□□□ 0.67
CSNK1D-201ENST00000269361 RABEP1Q15276 862 aa19.25■□□□□ 0.67
CSNK1D-201ENST00000269361 ASTLQ6HA08 431 aaPredicted RBP19.25■□□□□ 0.67
CSNK1D-201ENST00000269361 DTHD1Q6ZMT9 781 aa19.25■□□□□ 0.67
CSNK1D-201ENST00000269361 TMEM105Q8N8V8 129 aa19.25■□□□□ 0.67
CSNK1D-201ENST00000269361 LNX1Q8TBB1 728 aaPredicted RBP19.25■□□□□ 0.67
CSNK1D-201ENST00000269361 CLSTN3Q9BQT9 956 aa19.25■□□□□ 0.67
CSNK1D-201ENST00000269361 EPS15L1Q9UBC2 864 aa19.25■□□□□ 0.67
CSNK1D-201ENST00000269361 TNFSF13BQ9Y275 285 aa19.25■□□□□ 0.67
CSNK1D-201ENST00000269361 KIF3AQ9Y496 699 aa19.25■□□□□ 0.67
CSNK1D-201ENST00000269361 GALR2O43603 387 aaPredicted RBP19.24■□□□□ 0.67
CSNK1D-201ENST00000269361 ZMYND10O75800 440 aa19.24■□□□□ 0.67
CSNK1D-201ENST00000269361 CDC25AP30304 524 aa19.24■□□□□ 0.67
CSNK1D-201ENST00000269361 NPTX2P47972 431 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms