RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 PTPRJQ12913 1337 aa17.95■□□□□ 0.46
CCDC40-201ENST00000269318 FAM189A1O60320 539 aa17.95■□□□□ 0.46
CCDC40-201ENST00000269318 SNAI1O95863 264 aaPredicted RBP17.95■□□□□ 0.46
CCDC40-201ENST00000269318 RHOXF2BP0C7M4 288 aa17.95■□□□□ 0.46
CCDC40-201ENST00000269318 CXCR5P32302 372 aa17.95■□□□□ 0.46
CCDC40-201ENST00000269318 FAM110CQ1W6H9 321 aa17.95■□□□□ 0.46
CCDC40-201ENST00000269318 CC2D1AQ6P1N0 951 aaPredicted RBP17.95■□□□□ 0.46
CCDC40-201ENST00000269318 TMCO3Q6UWJ1 677 aa17.95■□□□□ 0.46
CCDC40-201ENST00000269318 RNF149Q8NC42 400 aa17.95■□□□□ 0.46
CCDC40-201ENST00000269318 EPS8L1Q8TE68 723 aa17.95■□□□□ 0.46
CCDC40-201ENST00000269318 PSMB7Q99436 277 aa17.95■□□□□ 0.46
CCDC40-201ENST00000269318 RHOXF2Q9BQY4 288 aa17.95■□□□□ 0.46
CCDC40-201ENST00000269318 RNPEPQ9H4A4 650 aa17.95■□□□□ 0.46
CCDC40-201ENST00000269318 PDE11AQ9HCR9 933 aa17.95■□□□□ 0.46
CCDC40-201ENST00000269318 CNTNAP2Q9UHC6 1331 aa17.94■□□□□ 0.46
CCDC40-201ENST00000269318 CCDC151A5D8V7 595 aa17.94■□□□□ 0.46
CCDC40-201ENST00000269318 TULP1O00294 542 aaPredicted RBP17.94■□□□□ 0.46
CCDC40-201ENST00000269318 SGPL1O95470 568 aa17.94■□□□□ 0.46
CCDC40-201ENST00000269318 GH1P01241 217 aa17.94■□□□□ 0.46
CCDC40-201ENST00000269318 SRGAP2CP0DJJ0 459 aa17.94■□□□□ 0.46
CCDC40-201ENST00000269318 GCNT1Q02742 428 aa17.94■□□□□ 0.46
CCDC40-201ENST00000269318 BRD3Q15059 726 aa17.94■□□□□ 0.46
CCDC40-201ENST00000269318 TDRD10Q5VZ19 366 aaKnown RBP17.94■□□□□ 0.46
CCDC40-201ENST00000269318 CST9Q5W186 159 aa17.94■□□□□ 0.46
CCDC40-201ENST00000269318 SLFN11Q7Z7L1 901 aa17.94■□□□□ 0.46
CCDC40-201ENST00000269318 NOP9Q86U38 636 aaKnown RBP17.94■□□□□ 0.46
CCDC40-201ENST00000269318 PPTC7Q8NI37 304 aa17.94■□□□□ 0.46
CCDC40-201ENST00000269318 TATDN2Q93075 761 aa17.94■□□□□ 0.46
CCDC40-201ENST00000269318 FNBP1Q96RU3 617 aa17.94■□□□□ 0.46
CCDC40-201ENST00000269318 ARID3AQ99856 593 aa17.94■□□□□ 0.46
CCDC40-201ENST00000269318 MRPL4Q9BYD3 311 aaKnown RBP17.94■□□□□ 0.46
CCDC40-201ENST00000269318 SUCLA2Q9P2R7 463 aaPredicted RBP17.94■□□□□ 0.46
CCDC40-201ENST00000269318 TMCO5BA8MYB1 307 aa17.93■□□□□ 0.46
CCDC40-201ENST00000269318 CYP26A1O43174 497 aa17.93■□□□□ 0.46
CCDC40-201ENST00000269318 TOM1L1O75674 476 aa17.93■□□□□ 0.46
CCDC40-201ENST00000269318 LGALS2P05162 132 aa17.93■□□□□ 0.46
CCDC40-201ENST00000269318 CHRNB2P17787 502 aa17.93■□□□□ 0.46
CCDC40-201ENST00000269318 NOP2P46087 812 aaKnown RBP17.93■□□□□ 0.46
CCDC40-201ENST00000269318 LMBRD2Q68DH5 695 aaPredicted RBP17.93■□□□□ 0.46
CCDC40-201ENST00000269318 ZBTB8OSQ8IWT0 167 aa17.93■□□□□ 0.46
CCDC40-201ENST00000269318 ACO2Q99798 780 aaKnown RBP17.93■□□□□ 0.46
CCDC40-201ENST00000269318 FAM53CQ9NYF3 392 aa17.93■□□□□ 0.46
CCDC40-201ENST00000269318 ABLIM1O14639 778 aa17.93■□□□□ 0.46
CCDC40-201ENST00000269318 C22orf31O95567 290 aa17.93■□□□□ 0.46
CCDC40-201ENST00000269318 TNNI1P19237 187 aa17.93■□□□□ 0.46
CCDC40-201ENST00000269318 USP8P40818 1118 aa17.93■□□□□ 0.46
CCDC40-201ENST00000269318 ADCYAP1R1P41586 468 aa17.93■□□□□ 0.46
CCDC40-201ENST00000269318 ENOSF1Q7L5Y1 443 aa17.93■□□□□ 0.46
CCDC40-201ENST00000269318 SLC47A2Q86VL8 602 aa17.93■□□□□ 0.46
CCDC40-201ENST00000269318 RHPN2Q8IUC4 686 aa17.93■□□□□ 0.46
CCDC40-201ENST00000269318 RPUSD2Q8IZ73 545 aaKnown RBP17.93■□□□□ 0.46
CCDC40-201ENST00000269318 RFFLQ8WZ73 363 aa17.93■□□□□ 0.46
CCDC40-201ENST00000269318 ELMO3Q96BJ8 720 aa17.93■□□□□ 0.46
CCDC40-201ENST00000269318 MAML3Q96JK9 1138 aa17.93■□□□□ 0.46
CCDC40-201ENST00000269318 CGRRF1Q99675 332 aa17.93■□□□□ 0.46
CCDC40-201ENST00000269318 PI4K2AQ9BTU6 479 aa17.93■□□□□ 0.46
CCDC40-201ENST00000269318 ISCUQ9H1K1 167 aa17.93■□□□□ 0.46
CCDC40-201ENST00000269318 C2orf40Q9H1Z8 148 aa17.93■□□□□ 0.46
CCDC40-201ENST00000269318 PACSIN2Q9UNF0 486 aaPredicted RBP17.93■□□□□ 0.46
CCDC40-201ENST00000269318 ANKRD62A6NC57 917 aa17.92■□□□□ 0.46
CCDC40-201ENST00000269318 CLDN3O15551 220 aa17.92■□□□□ 0.46
CCDC40-201ENST00000269318 SEC31AO94979 1220 aaKnown RBP17.92■□□□□ 0.46
CCDC40-201ENST00000269318 VNN1O95497 513 aa17.92■□□□□ 0.46
CCDC40-201ENST00000269318 PRKCBP05771 671 aa17.92■□□□□ 0.46
CCDC40-201ENST00000269318 MATR3P43243 847 aaKnown RBP eCLIP17.92■□□□□ 0.46
CCDC40-201ENST00000269318 C2orf54Q08AI8 447 aa17.92■□□□□ 0.46
CCDC40-201ENST00000269318 MAPK6Q16659 721 aa17.92■□□□□ 0.46
CCDC40-201ENST00000269318 EFCAB12Q6NXP0 572 aa17.92■□□□□ 0.46
CCDC40-201ENST00000269318 SPATA4Q8NEY3 305 aa17.92■□□□□ 0.46
CCDC40-201ENST00000269318 HNRNPLLQ8WVV9 542 aaKnown RBP17.92■□□□□ 0.46
CCDC40-201ENST00000269318 CTNNBL1Q8WYA6 563 aaPredicted RBP17.92■□□□□ 0.46
CCDC40-201ENST00000269318 ZBTB10Q96DT7 871 aa17.92■□□□□ 0.46
CCDC40-201ENST00000269318 PCDHB18PQ96TA0 734 aa17.92■□□□□ 0.46
CCDC40-201ENST00000269318 GOLPH3Q9H4A6 298 aa17.92■□□□□ 0.46
CCDC40-201ENST00000269318 ACP6Q9NPH0 428 aa17.92■□□□□ 0.46
CCDC40-201ENST00000269318 SEPT11Q9NVA2 429 aaKnown RBP17.92■□□□□ 0.46
CCDC40-201ENST00000269318 RNF14Q9UBS8 474 aa17.92■□□□□ 0.46
CCDC40-201ENST00000269318 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.91■□□□□ 0.46
CCDC40-201ENST00000269318 HLA-DRAP01903 254 aa17.91■□□□□ 0.46
CCDC40-201ENST00000269318 TUBBP07437 444 aa17.91■□□□□ 0.46
CCDC40-201ENST00000269318 GJB1P08034 283 aa17.91■□□□□ 0.46
CCDC40-201ENST00000269318 MAPK4P31152 587 aa17.91■□□□□ 0.46
CCDC40-201ENST00000269318 CLCN3P51790 818 aa17.91■□□□□ 0.46
CCDC40-201ENST00000269318 VSNL1P62760 191 aa17.91■□□□□ 0.46
CCDC40-201ENST00000269318 ZNF484Q5JVG2 852 aa17.91■□□□□ 0.46
CCDC40-201ENST00000269318 WDR93Q6P2C0 686 aa17.91■□□□□ 0.46
CCDC40-201ENST00000269318 PLEKHH3Q7Z736 793 aa17.91■□□□□ 0.46
CCDC40-201ENST00000269318 DPP9Q86TI2 863 aa17.91■□□□□ 0.46
CCDC40-201ENST00000269318 BRSK2Q8IWQ3 736 aa17.91■□□□□ 0.46
CCDC40-201ENST00000269318 MMGT1Q8N4V1 131 aa17.91■□□□□ 0.46
CCDC40-201ENST00000269318 SLC35G2Q8TBE7 412 aa17.91■□□□□ 0.46
CCDC40-201ENST00000269318 AFG1LQ8WV93 481 aa17.91■□□□□ 0.46
CCDC40-201ENST00000269318 DHX38Q92620 1227 aaKnown RBP17.91■□□□□ 0.46
CCDC40-201ENST00000269318 ARHGEF26Q96DR7 871 aa17.91■□□□□ 0.46
CCDC40-201ENST00000269318 FAM81BQ96LP2 452 aa17.91■□□□□ 0.46
CCDC40-201ENST00000269318 THAP2Q9H0W7 228 aa17.91■□□□□ 0.46
CCDC40-201ENST00000269318 FZD8Q9H461 694 aa17.91■□□□□ 0.46
CCDC40-201ENST00000269318 OSGEPQ9NPF4 335 aa17.91■□□□□ 0.46
CCDC40-201ENST00000269318 SMARCAL1Q9NZC9 954 aa17.91■□□□□ 0.46
CCDC40-201ENST00000269318 EHD2Q9NZN4 543 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms