RNA–Protein interactions for RNA: ENST00000268896.9

PCTP-201, Transcript of phosphatidylcholine transfer protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCTP, Length 2,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCTP-201ENST00000268896 PTPRJQ12913 1337 aa17.49■□□□□ 0.39
PCTP-201ENST00000268896 KIAA0391O15091 583 aaKnown RBP17.49■□□□□ 0.39
PCTP-201ENST00000268896 N4BP1O75113 896 aaKnown RBP17.49■□□□□ 0.39
PCTP-201ENST00000268896 GNRH1P01148 92 aa17.49■□□□□ 0.39
PCTP-201ENST00000268896 ARF4P18085 180 aaPredicted RBP17.49■□□□□ 0.39
PCTP-201ENST00000268896 CETN1Q12798 172 aa17.49■□□□□ 0.39
PCTP-201ENST00000268896 PSMD6Q15008 389 aa17.49■□□□□ 0.39
PCTP-201ENST00000268896 MEA1Q16626 185 aa17.49■□□□□ 0.39
PCTP-201ENST00000268896 SFMBT2Q5VUG0 894 aa17.49■□□□□ 0.39
PCTP-201ENST00000268896 KRT39Q6A163 491 aa17.49■□□□□ 0.39
PCTP-201ENST00000268896 ZNF410Q86VK4 478 aa17.49■□□□□ 0.39
PCTP-201ENST00000268896 TMEM192Q8IY95 271 aa17.49■□□□□ 0.39
PCTP-201ENST00000268896 PXYLP1Q8TE99 480 aa17.49■□□□□ 0.39
PCTP-201ENST00000268896 SH3TC2Q8TF17 1288 aa17.49■□□□□ 0.39
PCTP-201ENST00000268896 ZNF516Q92618 1163 aa17.49■□□□□ 0.39
PCTP-201ENST00000268896 BEGAINQ9BUH8 593 aa17.49■□□□□ 0.39
PCTP-201ENST00000268896 CDT1Q9H211 546 aa17.49■□□□□ 0.39
PCTP-201ENST00000268896 PTPRHQ9HD43 1115 aa17.49■□□□□ 0.39
PCTP-201ENST00000268896 PPP2R2CQ9Y2T4 447 aa17.49■□□□□ 0.39
PCTP-201ENST00000268896 CEP350Q5VT06 3117 aa17.49■□□□□ 0.39
PCTP-201ENST00000268896 A0A0U1RQJ8 604 aa17.48■□□□□ 0.39
PCTP-201ENST00000268896 OGTO15294 1046 aa17.48■□□□□ 0.39
PCTP-201ENST00000268896 FAM189A1O60320 539 aa17.48■□□□□ 0.39
PCTP-201ENST00000268896 TSPAN1O60635 241 aa17.48■□□□□ 0.39
PCTP-201ENST00000268896 GNAT1P11488 350 aa17.48■□□□□ 0.39
PCTP-201ENST00000268896 PROZP22891 400 aa17.48■□□□□ 0.39
PCTP-201ENST00000268896 EPC2Q52LR7 807 aa17.48■□□□□ 0.39
PCTP-201ENST00000268896 GDF6Q6KF10 455 aaPredicted RBP17.48■□□□□ 0.39
PCTP-201ENST00000268896 USP37Q86T82 979 aa17.48■□□□□ 0.39
PCTP-201ENST00000268896 IFNLR1Q8IU57 520 aaPredicted RBP17.48■□□□□ 0.39
PCTP-201ENST00000268896 KLHDC9Q8NEP7 349 aa17.48■□□□□ 0.39
PCTP-201ENST00000268896 LMO3Q8TAP4 145 aa17.48■□□□□ 0.39
PCTP-201ENST00000268896 TAS1R2Q8TE23 839 aa17.48■□□□□ 0.39
PCTP-201ENST00000268896 ATRIPQ8WXE1 791 aa17.48■□□□□ 0.39
PCTP-201ENST00000268896 SEMA4DQ92854 862 aa17.48■□□□□ 0.39
PCTP-201ENST00000268896 GCOM2Q9BZD3 368 aaPredicted RBP17.48■□□□□ 0.39
PCTP-201ENST00000268896 EDEM3Q9BZQ6 932 aa17.48■□□□□ 0.39
PCTP-201ENST00000268896 PDZD7Q9H5P4 517 aa17.48■□□□□ 0.39
PCTP-201ENST00000268896 NHEJ1Q9H9Q4 299 aaPredicted RBP17.48■□□□□ 0.39
PCTP-201ENST00000268896 TMEM8AQ9HCN3 771 aa17.48■□□□□ 0.39
PCTP-201ENST00000268896 PLAGL2Q9UPG8 496 aa17.48■□□□□ 0.39
PCTP-201ENST00000268896 TNFSF13BQ9Y275 285 aa17.48■□□□□ 0.39
PCTP-201ENST00000268896 CNTNAP2Q9UHC6 1331 aa17.48■□□□□ 0.39
PCTP-201ENST00000268896 GRK4P32298 578 aa17.48■□□□□ 0.39
PCTP-201ENST00000268896 KCNJ6P48051 423 aa17.48■□□□□ 0.39
PCTP-201ENST00000268896 FAM187BQ17R55 369 aa17.48■□□□□ 0.39
PCTP-201ENST00000268896 ARHGAP44Q17R89 818 aa17.48■□□□□ 0.39
PCTP-201ENST00000268896 TDRD12Q587J7 1177 aaKnown RBP17.48■□□□□ 0.39
PCTP-201ENST00000268896 PHLDB3Q6NSJ2 640 aa17.48■□□□□ 0.39
PCTP-201ENST00000268896 SV2AQ7L0J3 742 aa17.48■□□□□ 0.39
PCTP-201ENST00000268896 ARHGEF19Q8IW93 802 aa17.48■□□□□ 0.39
PCTP-201ENST00000268896 KCND1Q9NSA2 647 aa17.48■□□□□ 0.39
PCTP-201ENST00000268896 ARHGAP20Q9P2F6 1191 aa17.48■□□□□ 0.39
PCTP-201ENST00000268896 GTF2IRD1Q9UHL9 959 aa17.48■□□□□ 0.39
PCTP-201ENST00000268896 DNAJC12Q9UKB3 198 aa17.48■□□□□ 0.39
PCTP-201ENST00000268896 CLSTN1O94985 981 aa17.47■□□□□ 0.39
PCTP-201ENST00000268896 ARHGEF6Q15052 776 aa17.47■□□□□ 0.39
PCTP-201ENST00000268896 CATSPER4Q7RTX7 472 aa17.47■□□□□ 0.39
PCTP-201ENST00000268896 SRGAP1Q7Z6B7 1085 aa17.47■□□□□ 0.39
PCTP-201ENST00000268896 SLAIN1Q8ND83 568 aa17.47■□□□□ 0.39
PCTP-201ENST00000268896 TMEM40Q8WWA1 233 aa17.47■□□□□ 0.39
PCTP-201ENST00000268896 PI4K2AQ9BTU6 479 aa17.47■□□□□ 0.39
PCTP-201ENST00000268896 SCN10AQ9Y5Y9 1956 aa17.47■□□□□ 0.39
PCTP-201ENST00000268896 BIRC3Q13489 604 aa17.47■□□□□ 0.39
PCTP-201ENST00000268896 ASIC2Q16515 512 aa17.47■□□□□ 0.39
PCTP-201ENST00000268896 RNF180Q86T96 592 aa17.47■□□□□ 0.39
PCTP-201ENST00000268896 OR5B17Q8NGF7 314 aa17.47■□□□□ 0.39
PCTP-201ENST00000268896 PRIMPOLQ96LW4 560 aa17.47■□□□□ 0.39
PCTP-201ENST00000268896 DEF6Q9H4E7 631 aa17.47■□□□□ 0.39
PCTP-201ENST00000268896 HMX1Q9NP08 348 aaPredicted RBP17.47■□□□□ 0.39
PCTP-201ENST00000268896 UBE2TQ9NPD8 197 aaPredicted RBP17.47■□□□□ 0.39
PCTP-201ENST00000268896 APEX2Q9UBZ4 518 aa17.47■□□□□ 0.39
PCTP-201ENST00000268896 CPSF3Q9UKF6 684 aaKnown RBP17.47■□□□□ 0.39
PCTP-201ENST00000268896 ADGRG1Q9Y653 693 aa17.47■□□□□ 0.39
PCTP-201ENST00000268896 P4HA2O15460 535 aa17.46■□□□□ 0.39
PCTP-201ENST00000268896 NDUFA10O95299 355 aa17.46■□□□□ 0.39
PCTP-201ENST00000268896 CTSHP09668 335 aa17.46■□□□□ 0.39
PCTP-201ENST00000268896 EIF4A3P38919 411 aaKnown RBP17.46■□□□□ 0.39
PCTP-201ENST00000268896 CCSAPQ6IQ19 270 aaPredicted RBP17.46■□□□□ 0.39
PCTP-201ENST00000268896 BRSK2Q8IWQ3 736 aa17.46■□□□□ 0.39
PCTP-201ENST00000268896 REXO1L1PQ8IX06 675 aa17.46■□□□□ 0.39
PCTP-201ENST00000268896 KAT5Q92993 513 aa17.46■□□□□ 0.39
PCTP-201ENST00000268896 WNT8BQ93098 351 aa17.46■□□□□ 0.39
PCTP-201ENST00000268896 CGRRF1Q99675 332 aa17.46■□□□□ 0.39
PCTP-201ENST00000268896 EPN1Q9Y6I3 576 aaPredicted RBP17.46■□□□□ 0.39
PCTP-201ENST00000268896 ZSCAN12O43309 604 aa17.45■□□□□ 0.38
PCTP-201ENST00000268896 CCDC175P0C221 793 aa17.45■□□□□ 0.38
PCTP-201ENST00000268896 CXCL8P10145 99 aa17.45■□□□□ 0.38
PCTP-201ENST00000268896 HOXC8P31273 242 aa17.45■□□□□ 0.38
PCTP-201ENST00000268896 HNRNPH3P31942 346 aaKnown RBP17.45■□□□□ 0.38
PCTP-201ENST00000268896 DRAP1Q14919 205 aaPredicted RBP17.45■□□□□ 0.38
PCTP-201ENST00000268896 TDRD10Q5VZ19 366 aaKnown RBP17.45■□□□□ 0.38
PCTP-201ENST00000268896 SCARA3Q6AZY7 606 aa17.45■□□□□ 0.38
PCTP-201ENST00000268896 FBXL13Q8NEE6 735 aa17.45■□□□□ 0.38
PCTP-201ENST00000268896 CCDC42Q96M95 316 aa17.45■□□□□ 0.38
PCTP-201ENST00000268896 RAB20Q9NX57 234 aa17.45■□□□□ 0.38
PCTP-201ENST00000268896 TFR2Q9UP52 801 aa17.45■□□□□ 0.38
PCTP-201ENST00000268896 GRIN2DO15399 1336 aa17.45■□□□□ 0.38
PCTP-201ENST00000268896 GFPT2O94808 682 aa17.45■□□□□ 0.38
PCTP-201ENST00000268896 DARSP14868 501 aaKnown RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms