RNA–Protein interactions for RNA: ENST00000268720.9

CPNE7-201, Transcript of copine 7, humanhuman

TSL 1 (best) BASIC

Gene CPNE7, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-201ENST00000268720 GMPSP49915 693 aaPredicted RBP20.48■□□□□ 0.87
CPNE7-201ENST00000268720 PPP2R2AP63151 447 aa20.48■□□□□ 0.87
CPNE7-201ENST00000268720 SNRNP35Q16560 246 aaKnown RBP20.48■□□□□ 0.87
CPNE7-201ENST00000268720 JAMLQ86YT9 394 aa20.48■□□□□ 0.87
CPNE7-201ENST00000268720 KREMEN1Q96MU8 473 aa20.48■□□□□ 0.87
CPNE7-201ENST00000268720 GJA3Q9Y6H8 435 aa20.48■□□□□ 0.87
CPNE7-201ENST00000268720 O00370 1275 aa20.47■□□□□ 0.87
CPNE7-201ENST00000268720 PEX10O60683 326 aa20.47■□□□□ 0.87
CPNE7-201ENST00000268720 FSBPO95073 299 aa20.47■□□□□ 0.87
CPNE7-201ENST00000268720 NR3C2P08235 984 aa20.47■□□□□ 0.87
CPNE7-201ENST00000268720 ARFGAP2Q8N6H7 521 aa20.47■□□□□ 0.87
CPNE7-201ENST00000268720 RNF25Q96BH1 459 aaPredicted RBP20.47■□□□□ 0.87
CPNE7-201ENST00000268720 ST6GALNAC4Q9H4F1 302 aa20.47■□□□□ 0.87
CPNE7-201ENST00000268720 AZI2Q9H6S1 392 aa20.47■□□□□ 0.87
CPNE7-201ENST00000268720 TBX20Q9UMR3 447 aa20.47■□□□□ 0.87
CPNE7-201ENST00000268720 PFASO15067 1338 aa20.47■□□□□ 0.87
CPNE7-201ENST00000268720 DENND3A2RUS2 1198 aa20.47■□□□□ 0.87
CPNE7-201ENST00000268720 TRAPPC3O43617 180 aa20.47■□□□□ 0.87
CPNE7-201ENST00000268720 GJB6O95452 261 aa20.47■□□□□ 0.87
CPNE7-201ENST00000268720 RPL21P46778 160 aaKnown RBP20.47■□□□□ 0.87
CPNE7-201ENST00000268720 POU5F1Q01860 360 aaKnown RBP20.47■□□□□ 0.87
CPNE7-201ENST00000268720 CETN1Q12798 172 aa20.47■□□□□ 0.87
CPNE7-201ENST00000268720 SLC29A2Q14542 456 aa20.47■□□□□ 0.87
CPNE7-201ENST00000268720 LRRC14Q15048 493 aa20.47■□□□□ 0.87
CPNE7-201ENST00000268720 DALRD3Q5D0E6 543 aaKnown RBP20.47■□□□□ 0.87
CPNE7-201ENST00000268720 RUFY4Q6ZNE9 571 aa20.47■□□□□ 0.87
CPNE7-201ENST00000268720 VSIG10LQ86VR7 867 aa20.47■□□□□ 0.87
CPNE7-201ENST00000268720 CCDC13Q8IYE1 715 aa20.47■□□□□ 0.87
CPNE7-201ENST00000268720 C1orf131Q8NDD1 294 aaKnown RBP20.47■□□□□ 0.87
CPNE7-201ENST00000268720 ADAM33Q9BZ11 813 aa20.47■□□□□ 0.87
CPNE7-201ENST00000268720 SLITRK6Q9H5Y7 841 aa20.47■□□□□ 0.87
CPNE7-201ENST00000268720 MAP3K20Q9NYL2 800 aaKnown RBP20.47■□□□□ 0.87
CPNE7-201ENST00000268720 GABBR1Q9UBS5 961 aa20.47■□□□□ 0.87
CPNE7-201ENST00000268720 DAAM1Q9Y4D1 1078 aa20.47■□□□□ 0.87
CPNE7-201ENST00000268720 ADGRA3Q8IWK6 1321 aa20.46■□□□□ 0.87
CPNE7-201ENST00000268720 NF2P35240 595 aa20.46■□□□□ 0.87
CPNE7-201ENST00000268720 HMGCS2P54868 508 aa20.46■□□□□ 0.87
CPNE7-201ENST00000268720 BACE1P56817 501 aa20.46■□□□□ 0.87
CPNE7-201ENST00000268720 SNRNP48Q6IEG0 339 aaKnown RBP20.46■□□□□ 0.87
CPNE7-201ENST00000268720 SLC39A4Q6P5W5 647 aa20.46■□□□□ 0.87
CPNE7-201ENST00000268720 EPB41L4BQ9H329 900 aa20.46■□□□□ 0.87
CPNE7-201ENST00000268720 CD248Q9HCU0 757 aa20.46■□□□□ 0.87
CPNE7-201ENST00000268720 JAK3P52333 1124 aa20.46■□□□□ 0.87
CPNE7-201ENST00000268720 KRT76Q01546 638 aa20.46■□□□□ 0.87
CPNE7-201ENST00000268720 C6orf89Q6UWU4 347 aa20.46■□□□□ 0.87
CPNE7-201ENST00000268720 PRELID2Q8N945 189 aa20.46■□□□□ 0.87
CPNE7-201ENST00000268720 TMEM174Q8WUU8 243 aa20.46■□□□□ 0.87
CPNE7-201ENST00000268720 MOV10L1Q9BXT6 1211 aaKnown RBP20.46■□□□□ 0.87
CPNE7-201ENST00000268720 CNOT7Q9UIV1 285 aaKnown RBP20.46■□□□□ 0.87
CPNE7-201ENST00000268720 CREB1P16220 341 aa20.45■□□□□ 0.86
CPNE7-201ENST00000268720 CHRNB2P17787 502 aa20.45■□□□□ 0.86
CPNE7-201ENST00000268720 EPS8L1Q8TE68 723 aa20.45■□□□□ 0.86
CPNE7-201ENST00000268720 PARD3BQ8TEW8 1205 aa20.45■□□□□ 0.86
CPNE7-201ENST00000268720 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.45■□□□□ 0.867e-9■■■■■ 72.6
CPNE7-201ENST00000268720 TATDN2Q93075 761 aa20.45■□□□□ 0.86
CPNE7-201ENST00000268720 CEP170P1Q96L14 293 aa20.45■□□□□ 0.86
CPNE7-201ENST00000268720 DDX23Q9BUQ8 820 aaKnown RBP20.45■□□□□ 0.86
CPNE7-201ENST00000268720 PCDHA10Q9Y5I2 948 aa20.45■□□□□ 0.86
CPNE7-201ENST00000268720 CLDN3O15551 220 aa20.45■□□□□ 0.86
CPNE7-201ENST00000268720 SPOPO43791 374 aa20.45■□□□□ 0.86
CPNE7-201ENST00000268720 RFX1P22670 979 aa20.45■□□□□ 0.86
CPNE7-201ENST00000268720 SFNP31947 248 aa20.45■□□□□ 0.86
CPNE7-201ENST00000268720 BIRC3Q13489 604 aa20.45■□□□□ 0.86
CPNE7-201ENST00000268720 AEBP2Q6ZN18 517 aaPredicted RBP20.45■□□□□ 0.86
CPNE7-201ENST00000268720 SEPT14Q6ZU15 432 aa20.45■□□□□ 0.86
CPNE7-201ENST00000268720 NLRX1Q86UT6 975 aa20.45■□□□□ 0.86
CPNE7-201ENST00000268720 PASD1Q8IV76 773 aa20.45■□□□□ 0.86
CPNE7-201ENST00000268720 EIF1ADQ8N9N8 165 aaKnown RBP20.45■□□□□ 0.86
CPNE7-201ENST00000268720 CABS1Q96KC9 395 aa20.45■□□□□ 0.86
CPNE7-201ENST00000268720 WRNIP1Q96S55 665 aa20.45■□□□□ 0.86
CPNE7-201ENST00000268720 OSBPL7Q9BZF2 842 aa20.45■□□□□ 0.86
CPNE7-201ENST00000268720 KLHL11Q9NVR0 708 aa20.45■□□□□ 0.86
CPNE7-201ENST00000268720 DNM1LO00429 736 aa20.44■□□□□ 0.86
CPNE7-201ENST00000268720 P4HA2O15460 535 aa20.44■□□□□ 0.86
CPNE7-201ENST00000268720 ACTN3Q08043 901 aaPredicted RBP20.44■□□□□ 0.86
CPNE7-201ENST00000268720 ZDHHC24Q6UX98 284 aa20.44■□□□□ 0.86
CPNE7-201ENST00000268720 CCDC121Q6ZUS5 278 aa20.44■□□□□ 0.86
CPNE7-201ENST00000268720 SPATS2Q86XZ4 545 aaKnown RBP20.44■□□□□ 0.86
CPNE7-201ENST00000268720 MAP4K3Q8IVH8 894 aa20.44■□□□□ 0.86
CPNE7-201ENST00000268720 TAS1R2Q8TE23 839 aa20.44■□□□□ 0.86
CPNE7-201ENST00000268720 SEC16BQ96JE7 1060 aa20.44■□□□□ 0.86
CPNE7-201ENST00000268720 HERPUD2Q9BSE4 406 aa20.44■□□□□ 0.86
CPNE7-201ENST00000268720 NOCTQ9UK39 431 aaKnown RBP20.44■□□□□ 0.86
CPNE7-201ENST00000268720 ACSL3O95573 720 aa20.44■□□□□ 0.86
CPNE7-201ENST00000268720 KRT5P13647 590 aa20.44■□□□□ 0.86
CPNE7-201ENST00000268720 DMP1Q13316 513 aaPredicted RBP20.44■□□□□ 0.86
CPNE7-201ENST00000268720 MTMR3Q13615 1198 aa20.44■□□□□ 0.86
CPNE7-201ENST00000268720 SEZ6Q53EL9 994 aa20.44■□□□□ 0.86
CPNE7-201ENST00000268720 SWSAP1Q6NVH7 229 aa20.44■□□□□ 0.86
CPNE7-201ENST00000268720 CCDC105Q8IYK2 499 aa20.44■□□□□ 0.86
CPNE7-201ENST00000268720 REPS2Q8NFH8 660 aa20.44■□□□□ 0.86
CPNE7-201ENST00000268720 PAGR1Q9BTK6 254 aa20.44■□□□□ 0.86
CPNE7-201ENST00000268720 NUP85Q9BW27 656 aa20.44■□□□□ 0.86
CPNE7-201ENST00000268720 HEMGNQ9BXL5 484 aa20.44■□□□□ 0.86
CPNE7-201ENST00000268720 KMT5AQ9NQR1 393 aa20.44■□□□□ 0.86
CPNE7-201ENST00000268720 ANKEF1Q9NU02 776 aa20.44■□□□□ 0.86
CPNE7-201ENST00000268720 CTNNAL1Q9UBT7 734 aa20.44■□□□□ 0.86
CPNE7-201ENST00000268720 ZNF214Q9UL59 606 aaPredicted RBP20.44■□□□□ 0.86
CPNE7-201ENST00000268720 CFHP08603 1231 aa20.43■□□□□ 0.86
CPNE7-201ENST00000268720 BYSLQ13895 437 aaKnown RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms