RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 ANKS3Q6ZW76 656 aa11.76□□□□□ -0.53
CHFR-201ENST00000266880 LRRC53A6NM62 1247 aa11.76□□□□□ -0.53
CHFR-201ENST00000266880 TUBA3CQ13748 450 aa11.76□□□□□ -0.53
CHFR-201ENST00000266880 SGO1Q5FBB7 561 aa11.76□□□□□ -0.53
CHFR-201ENST00000266880 LMBRD2Q68DH5 695 aaPredicted RBP11.76□□□□□ -0.53
CHFR-201ENST00000266880 CALML6Q8TD86 181 aa11.76□□□□□ -0.53
CHFR-201ENST00000266880 CD2BP2O95400 341 aaKnown RBP11.76□□□□□ -0.53
CHFR-201ENST00000266880 RHPN2Q8IUC4 686 aa11.76□□□□□ -0.53
CHFR-201ENST00000266880 TARSL2A2RTX5 802 aaKnown RBP11.76□□□□□ -0.53
CHFR-201ENST00000266880 KCTD21Q4G0X4 260 aa11.76□□□□□ -0.53
CHFR-201ENST00000266880 ALBP02768 609 aa11.76□□□□□ -0.53
CHFR-201ENST00000266880 LRPAP1P30533 357 aa11.76□□□□□ -0.53
CHFR-201ENST00000266880 SCNN1DP51172 638 aa11.76□□□□□ -0.53
CHFR-201ENST00000266880 ZNF564Q8TBZ8 553 aaPredicted RBP11.76□□□□□ -0.53
CHFR-201ENST00000266880 IMPAD1Q9NX62 359 aa11.76□□□□□ -0.53
CHFR-201ENST00000266880 CACNA2D2Q9NY47 1150 aa11.76□□□□□ -0.53
CHFR-201ENST00000266880 FKBP9O95302 570 aa11.75□□□□□ -0.53
CHFR-201ENST00000266880 VHLP40337 213 aa11.75□□□□□ -0.53
CHFR-201ENST00000266880 MIS18BP1Q6P0N0 1132 aa11.75□□□□□ -0.53
CHFR-201ENST00000266880 FKBP9P1Q75LS8 142 aa11.75□□□□□ -0.53
CHFR-201ENST00000266880 DBR1Q9UK59 544 aaKnown RBP11.75□□□□□ -0.53
CHFR-201ENST00000266880 CLCA2Q9UQC9 943 aa11.75□□□□□ -0.53
CHFR-201ENST00000266880 MSL3P1P0C860 447 aa11.75□□□□□ -0.53
CHFR-201ENST00000266880 NFKBIAP25963 317 aa11.75□□□□□ -0.53
CHFR-201ENST00000266880 RNF219Q5W0B1 726 aaPredicted RBP11.75□□□□□ -0.53
CHFR-201ENST00000266880 RCSD1Q6JBY9 416 aa11.75□□□□□ -0.53
CHFR-201ENST00000266880 KIAA1841Q6NSI8 718 aa11.75□□□□□ -0.53
CHFR-201ENST00000266880 SPICE1Q8N0Z3 855 aa11.75□□□□□ -0.53
CHFR-201ENST00000266880 NDUFAF2Q8N183 169 aa11.75□□□□□ -0.53
CHFR-201ENST00000266880 B2RBV5 119 aa11.75□□□□□ -0.53
CHFR-201ENST00000266880 SLFN13Q68D06 897 aa11.75□□□□□ -0.53
CHFR-201ENST00000266880 ANKRD40Q6AI12 368 aa11.75□□□□□ -0.53
CHFR-201ENST00000266880 LARGE2Q8N3Y3 721 aa11.75□□□□□ -0.53
CHFR-201ENST00000266880 NSUN7Q8NE18 718 aaKnown RBP11.75□□□□□ -0.53
CHFR-201ENST00000266880 KCNK16Q96T55 309 aa11.75□□□□□ -0.53
CHFR-201ENST00000266880 PCMTD2Q9NV79 361 aa11.75□□□□□ -0.53
CHFR-201ENST00000266880 MYO9BQ13459 2157 aa11.75□□□□□ -0.53
CHFR-201ENST00000266880 UBA6A0AVT1 1052 aaPredicted RBP11.75□□□□□ -0.53
CHFR-201ENST00000266880 FAM200BP0CF97 657 aa11.75□□□□□ -0.53
CHFR-201ENST00000266880 CNGA2Q16280 664 aa11.75□□□□□ -0.53
CHFR-201ENST00000266880 MFSD14BQ5SR56 506 aa11.75□□□□□ -0.53
CHFR-201ENST00000266880 MCRS1Q96EZ8 462 aa11.75□□□□□ -0.53
CHFR-201ENST00000266880 GOLPH3LQ9H4A5 285 aa11.75□□□□□ -0.53
CHFR-201ENST00000266880 HPCAL4Q9UM19 191 aa11.75□□□□□ -0.53
CHFR-201ENST00000266880 KRT6AP02538 564 aa11.75□□□□□ -0.53
CHFR-201ENST00000266880 KRT6BP04259 564 aa11.75□□□□□ -0.53
CHFR-201ENST00000266880 KRT6CP48668 564 aa11.75□□□□□ -0.53
CHFR-201ENST00000266880 SHROOM1Q2M3G4 852 aaPredicted RBP11.75□□□□□ -0.53
CHFR-201ENST00000266880 C6orf62Q9GZU0 229 aaPredicted RBP11.75□□□□□ -0.53
CHFR-201ENST00000266880 ARSEP51690 589 aa11.75□□□□□ -0.53
CHFR-201ENST00000266880 CHCHD4Q8N4Q1 142 aa11.75□□□□□ -0.53
CHFR-201ENST00000266880 UBE2OQ9C0C9 1292 aaKnown RBP11.75□□□□□ -0.53
CHFR-201ENST00000266880 DNAJC12Q9UKB3 198 aa11.75□□□□□ -0.53
CHFR-201ENST00000266880 RPRD2Q5VT52 1461 aaKnown RBP11.75□□□□□ -0.53
CHFR-201ENST00000266880 ZBTB39O15060 712 aa11.75□□□□□ -0.53
CHFR-201ENST00000266880 SKAP2O75563 359 aaPredicted RBP11.75□□□□□ -0.53
CHFR-201ENST00000266880 CALB1P05937 261 aa11.75□□□□□ -0.53
CHFR-201ENST00000266880 CCT3P49368 545 aaKnown RBP11.75□□□□□ -0.53
CHFR-201ENST00000266880 TUBA1BP68363 451 aa11.75□□□□□ -0.53
CHFR-201ENST00000266880 ZCWPW2Q504Y3 356 aa11.75□□□□□ -0.53
CHFR-201ENST00000266880 TUBA1AQ71U36 451 aa11.75□□□□□ -0.53
CHFR-201ENST00000266880 SNX31Q8N9S9 440 aa11.75□□□□□ -0.53
CHFR-201ENST00000266880 MAGEB5Q9BZ81 275 aa11.75□□□□□ -0.53
CHFR-201ENST00000266880 SP110Q9HB58 689 aa11.75□□□□□ -0.53
CHFR-201ENST00000266880 LSP1P33241 339 aa11.75□□□□□ -0.53
CHFR-201ENST00000266880 NFIL3Q16649 462 aa11.75□□□□□ -0.53
CHFR-201ENST00000266880 GCNAQ96QF7 691 aa11.75□□□□□ -0.53
CHFR-201ENST00000266880 SERHL2Q9H4I8 314 aa11.75□□□□□ -0.53
CHFR-201ENST00000266880 SERHLQ9NQF3 203 aa11.75□□□□□ -0.53
CHFR-201ENST00000266880 SLC5A4Q9NY91 659 aa11.75□□□□□ -0.53
CHFR-201ENST00000266880 PITPNM2Q9BZ72 1349 aa11.75□□□□□ -0.53
CHFR-201ENST00000266880 MYL2P10916 166 aa11.74□□□□□ -0.53
CHFR-201ENST00000266880 ACADSP16219 412 aa11.74□□□□□ -0.53
CHFR-201ENST00000266880 RANBP17Q9H2T7 1088 aaKnown RBP11.74□□□□□ -0.53
CHFR-201ENST00000266880 EMILIN3Q9NT22 766 aa11.74□□□□□ -0.53
CHFR-201ENST00000266880 ZFATQ9P243 1243 aa11.74□□□□□ -0.53
CHFR-201ENST00000266880 DAPK2Q9UIK4 370 aa11.74□□□□□ -0.53
CHFR-201ENST00000266880 CFAP43Q8NDM7 1665 aa11.74□□□□□ -0.53
CHFR-201ENST00000266880 MAGEA13PA6NCF6 341 aa11.74□□□□□ -0.53
CHFR-201ENST00000266880 HMOX2P30519 316 aa11.74□□□□□ -0.53
CHFR-201ENST00000266880 CORO7P57737 925 aa11.74□□□□□ -0.53
CHFR-201ENST00000266880 ICA1Q05084 483 aa11.74□□□□□ -0.53
CHFR-201ENST00000266880 ALFQ53S48 1182 aa11.74□□□□□ -0.53
CHFR-201ENST00000266880 GTF2A1LQ9UNN4 478 aa11.74□□□□□ -0.53
CHFR-201ENST00000266880 GRIN2BQ13224 1484 aa11.74□□□□□ -0.53
CHFR-201ENST00000266880 SLC20A2Q08357 652 aa11.74□□□□□ -0.53
CHFR-201ENST00000266880 CHSY1Q86X52 802 aa11.74□□□□□ -0.53
CHFR-201ENST00000266880 ABI1Q8IZP0 508 aa11.74□□□□□ -0.53
CHFR-201ENST00000266880 TERB1Q8NA31 727 aa11.74□□□□□ -0.53
CHFR-201ENST00000266880 CCDC87Q9NVE4 849 aa11.74□□□□□ -0.53
CHFR-201ENST00000266880 SLC8A2Q9UPR5 921 aa11.74□□□□□ -0.53
CHFR-201ENST00000266880 DFFAO00273 331 aa11.74□□□□□ -0.53
CHFR-201ENST00000266880 KRT20P35900 424 aa11.74□□□□□ -0.53
CHFR-201ENST00000266880 IL12RB1P42701 662 aa11.74□□□□□ -0.53
CHFR-201ENST00000266880 RPF1Q9H9Y2 349 aaKnown RBP11.74□□□□□ -0.53
CHFR-201ENST00000266880 FLT4P35916 1363 aa11.74□□□□□ -0.53
CHFR-201ENST00000266880 ITGAXP20702 1163 aa11.74□□□□□ -0.53
CHFR-201ENST00000266880 LRRC63Q05C16 580 aa11.74□□□□□ -0.53
CHFR-201ENST00000266880 CTTNQ14247 550 aaKnown RBP11.74□□□□□ -0.53
CHFR-201ENST00000266880 DCAF4L1Q3SXM0 396 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms