RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 MAEAQ7L5Y9 396 aa13.38□□□□□ -0.27
BEST3-201ENST00000266661 C4orf19Q8IY42 314 aa13.38□□□□□ -0.27
BEST3-201ENST00000266661 UBL4BQ8N7F7 174 aa13.38□□□□□ -0.27
BEST3-201ENST00000266661 PSPC1Q8WXF1 523 aaKnown RBP13.38□□□□□ -0.27
BEST3-201ENST00000266661 ZNF317Q96PQ6 595 aaPredicted RBP13.38□□□□□ -0.27
BEST3-201ENST00000266661 OSBPL7Q9BZF2 842 aa13.38□□□□□ -0.27
BEST3-201ENST00000266661 SEPT11Q9NVA2 429 aaKnown RBP13.38□□□□□ -0.27
BEST3-201ENST00000266661 TMOD2Q9NZR1 351 aa13.38□□□□□ -0.27
BEST3-201ENST00000266661 BCCIPQ9P287 314 aaKnown RBP eCLIP13.38□□□□□ -0.27
BEST3-201ENST00000266661 CAPN7Q9Y6W3 813 aa13.38□□□□□ -0.27
BEST3-201ENST00000266661 MXI1P50539 228 aa13.38□□□□□ -0.27
BEST3-201ENST00000266661 PLTPP55058 493 aa13.38□□□□□ -0.27
BEST3-201ENST00000266661 IFT88Q13099 833 aa13.38□□□□□ -0.27
BEST3-201ENST00000266661 RASA3Q14644 834 aa13.38□□□□□ -0.27
BEST3-201ENST00000266661 UGCGQ16739 394 aa13.38□□□□□ -0.27
BEST3-201ENST00000266661 LACTB2Q53H82 288 aaPredicted RBP13.38□□□□□ -0.27
BEST3-201ENST00000266661 SWT1Q5T5J6 900 aaKnown RBP13.38□□□□□ -0.27
BEST3-201ENST00000266661 PRAMEF18Q5VWM3 479 aa13.38□□□□□ -0.27
BEST3-201ENST00000266661 SLC13A5Q86YT5 568 aaPredicted RBP13.38□□□□□ -0.27
BEST3-201ENST00000266661 ATXN2LQ8WWM7 1075 aaKnown RBP13.38□□□□□ -0.27
BEST3-201ENST00000266661 SLCO2A1Q92959 643 aa13.38□□□□□ -0.27
BEST3-201ENST00000266661 ART4Q93070 314 aa13.38□□□□□ -0.27
BEST3-201ENST00000266661 SEC16BQ96JE7 1060 aa13.38□□□□□ -0.27
BEST3-201ENST00000266661 FBXL18Q96ME1 805 aa13.38□□□□□ -0.27
BEST3-201ENST00000266661 XPO6Q96QU8 1125 aaKnown RBP13.38□□□□□ -0.27
BEST3-201ENST00000266661 RASAL2Q9UJF2 1139 aa13.38□□□□□ -0.27
BEST3-201ENST00000266661 GTF3C4Q9UKN8 822 aa13.38□□□□□ -0.27
BEST3-201ENST00000266661 PNMA2Q9UL42 364 aa13.38□□□□□ -0.27
BEST3-201ENST00000266661 FAM170AA1A519 330 aa13.37□□□□□ -0.27
BEST3-201ENST00000266661 ANKRD63C9JTQ0 380 aa13.37□□□□□ -0.27
BEST3-201ENST00000266661 BACH1O14867 736 aa13.37□□□□□ -0.27
BEST3-201ENST00000266661 CYP26A1O43174 497 aa13.37□□□□□ -0.27
BEST3-201ENST00000266661 RASSF9O75901 435 aa13.37□□□□□ -0.27
BEST3-201ENST00000266661 RARAP10276 462 aa13.37□□□□□ -0.27
BEST3-201ENST00000266661 COILP38432 576 aaPredicted RBP13.37□□□□□ -0.27
BEST3-201ENST00000266661 GPC3P51654 580 aa13.37□□□□□ -0.27
BEST3-201ENST00000266661 MESDQ14696 234 aa13.37□□□□□ -0.27
BEST3-201ENST00000266661 DLGAP5Q15398 846 aa13.37□□□□□ -0.27
BEST3-201ENST00000266661 SPRED3Q2MJR0 410 aa13.37□□□□□ -0.27
BEST3-201ENST00000266661 ANGEL2Q5VTE6 544 aaKnown RBP13.37□□□□□ -0.27
BEST3-201ENST00000266661 ARMC9Q7Z3E5 817 aa13.37□□□□□ -0.27
BEST3-201ENST00000266661 SLC47A2Q86VL8 602 aa13.37□□□□□ -0.27
BEST3-201ENST00000266661 HOOK3Q86VS8 718 aa13.37□□□□□ -0.27
BEST3-201ENST00000266661 CBWD2Q8IUF1 395 aa13.37□□□□□ -0.27
BEST3-201ENST00000266661 MDM1Q8TC05 714 aa13.37□□□□□ -0.27
BEST3-201ENST00000266661 SYTL5Q8TDW5 730 aaPredicted RBP13.37□□□□□ -0.27
BEST3-201ENST00000266661 PARD3BQ8TEW8 1205 aa13.37□□□□□ -0.27
BEST3-201ENST00000266661 FAM129AQ9BZQ8 928 aa13.37□□□□□ -0.27
BEST3-201ENST00000266661 SEMA4AQ9H3S1 761 aa13.37□□□□□ -0.27
BEST3-201ENST00000266661 ACP6Q9NPH0 428 aa13.37□□□□□ -0.27
BEST3-201ENST00000266661 CHORDC1Q9UHD1 332 aaPredicted RBP13.37□□□□□ -0.27
BEST3-201ENST00000266661 FSCN2O14926 492 aa13.36□□□□□ -0.27
BEST3-201ENST00000266661 SLC16A4O15374 487 aa13.36□□□□□ -0.27
BEST3-201ENST00000266661 MMEP08473 750 aa13.36□□□□□ -0.27
BEST3-201ENST00000266661 YWHABP31946 246 aaKnown RBP13.36□□□□□ -0.27
BEST3-201ENST00000266661 CDR2Q01850 454 aa13.36□□□□□ -0.27
BEST3-201ENST00000266661 SLC29A2Q14542 456 aa13.36□□□□□ -0.27
BEST3-201ENST00000266661 ZYXQ15942 572 aaKnown RBP13.36□□□□□ -0.27
BEST3-201ENST00000266661 CCDC137Q6PK04 289 aaKnown RBP13.36□□□□□ -0.27
BEST3-201ENST00000266661 MAP4K3Q8IVH8 894 aa13.36□□□□□ -0.27
BEST3-201ENST00000266661 MTMR14Q8NCE2 650 aa13.36□□□□□ -0.27
BEST3-201ENST00000266661 TMEM161BQ8NDZ6 487 aa13.36□□□□□ -0.27
BEST3-201ENST00000266661 TMC2Q8TDI7 906 aa13.36□□□□□ -0.27
BEST3-201ENST00000266661 ZBED3Q96IU2 234 aaPredicted RBP13.36□□□□□ -0.27
BEST3-201ENST00000266661 MFSD14AQ96MC6 490 aa13.36□□□□□ -0.27
BEST3-201ENST00000266661 IWS1Q96ST2 819 aa13.36□□□□□ -0.27
BEST3-201ENST00000266661 CEP89Q96ST8 783 aa13.36□□□□□ -0.27
BEST3-201ENST00000266661 CCDC134Q9H6E4 229 aa13.36□□□□□ -0.27
BEST3-201ENST00000266661 LRRC19Q9H756 370 aa13.36□□□□□ -0.27
BEST3-201ENST00000266661 GPRC5CQ9NQ84 441 aa13.36□□□□□ -0.27
BEST3-201ENST00000266661 ANKEF1Q9NU02 776 aa13.36□□□□□ -0.27
BEST3-201ENST00000266661 UVRAGQ9P2Y5 699 aa13.36□□□□□ -0.27
BEST3-201ENST00000266661 CCPG1Q9ULG6 757 aa13.36□□□□□ -0.27
BEST3-201ENST00000266661 TMEM150BA6NC51 233 aa13.36□□□□□ -0.27
BEST3-201ENST00000266661 CCDC169A6NNP5 214 aa13.36□□□□□ -0.27
BEST3-201ENST00000266661 DNM1LO00429 736 aa13.36□□□□□ -0.27
BEST3-201ENST00000266661 CCNE2O96020 404 aa13.36□□□□□ -0.27
BEST3-201ENST00000266661 RARGP13631 454 aa13.36□□□□□ -0.27
BEST3-201ENST00000266661 CYP11B1P15538 503 aa13.36□□□□□ -0.27
BEST3-201ENST00000266661 SMTNP53814 917 aa13.36□□□□□ -0.27
BEST3-201ENST00000266661 ENPEPQ07075 957 aa13.36□□□□□ -0.27
BEST3-201ENST00000266661 IFFO1Q0D2I5 559 aa13.36□□□□□ -0.27
BEST3-201ENST00000266661 ODF2Q5BJF6 829 aa13.36□□□□□ -0.27
BEST3-201ENST00000266661 CHADLQ6NUI6 762 aa13.36□□□□□ -0.27
BEST3-201ENST00000266661 SLC39A4Q6P5W5 647 aa13.36□□□□□ -0.27
BEST3-201ENST00000266661 CYFIP1Q7L576 1253 aa13.36□□□□□ -0.27
BEST3-201ENST00000266661 FAM83AQ86UY5 434 aa13.36□□□□□ -0.27
BEST3-201ENST00000266661 SAMD3Q8N6K7 520 aa13.36□□□□□ -0.27
BEST3-201ENST00000266661 ZNF564Q8TBZ8 553 aaPredicted RBP13.36□□□□□ -0.27
BEST3-201ENST00000266661 HVCN1Q96D96 273 aa13.36□□□□□ -0.27
BEST3-201ENST00000266661 RUNDC3BQ96NL0 473 aa13.36□□□□□ -0.27
BEST3-201ENST00000266661 NTPCRQ9BSD7 190 aaKnown RBP13.36□□□□□ -0.27
BEST3-201ENST00000266661 NUP85Q9BW27 656 aa13.36□□□□□ -0.27
BEST3-201ENST00000266661 TMEM39BQ9GZU3 492 aa13.36□□□□□ -0.27
BEST3-201ENST00000266661 TBC1D22BQ9NU19 505 aa13.36□□□□□ -0.27
BEST3-201ENST00000266661 MAP3K20Q9NYL2 800 aaKnown RBP13.36□□□□□ -0.27
BEST3-201ENST00000266661 GGA3Q9NZ52 723 aa13.36□□□□□ -0.27
BEST3-201ENST00000266661 PKD2L1Q9P0L9 805 aa13.36□□□□□ -0.27
BEST3-201ENST00000266661 PARP2Q9UGN5 583 aa13.36□□□□□ -0.27
BEST3-201ENST00000266661 GOLGA8IPA6NC78 632 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms