RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 C21orf2O43822 256 aa9.78□□□□□ -0.84
MSH4-201ENST00000263187 CFHP08603 1231 aa9.78□□□□□ -0.84
MSH4-201ENST00000263187 FMO1Q01740 532 aa9.78□□□□□ -0.84
MSH4-201ENST00000263187 AUHQ13825 339 aaKnown RBP9.78□□□□□ -0.84
MSH4-201ENST00000263187 SNCBQ16143 134 aa9.78□□□□□ -0.84
MSH4-201ENST00000263187 SNRNP35Q16560 246 aaKnown RBP9.78□□□□□ -0.84
MSH4-201ENST00000263187 STRIP1Q5VSL9 837 aa9.78□□□□□ -0.84
MSH4-201ENST00000263187 ATXN2LQ8WWM7 1075 aaKnown RBP9.78□□□□□ -0.84
MSH4-201ENST00000263187 POMGNT1Q8WZA1 660 aa9.78□□□□□ -0.84
MSH4-201ENST00000263187 CCT6BQ92526 530 aa9.78□□□□□ -0.84
MSH4-201ENST00000263187 CEP89Q96ST8 783 aa9.78□□□□□ -0.84
MSH4-201ENST00000263187 CDC42EP4Q9H3Q1 356 aaKnown RBP9.78□□□□□ -0.84
MSH4-201ENST00000263187 SAMD15Q9P1V8 674 aa9.78□□□□□ -0.84
MSH4-201ENST00000263187 SYNGAP1Q96PV0 1343 aa9.78□□□□□ -0.84
MSH4-201ENST00000263187 CENPFP49454 3210 aa9.78□□□□□ -0.84
MSH4-201ENST00000263187 CCT8L1PA6NM43 557 aa9.78□□□□□ -0.84
MSH4-201ENST00000263187 PI4K2BG5E9Z4 385 aa9.78□□□□□ -0.84
MSH4-201ENST00000263187 RTN2O75298 545 aa9.78□□□□□ -0.84
MSH4-201ENST00000263187 VIL1P09327 827 aaKnown RBP9.78□□□□□ -0.84
MSH4-201ENST00000263187 HARSP12081 509 aaKnown RBP9.78□□□□□ -0.84
MSH4-201ENST00000263187 CYP11B1P15538 503 aa9.78□□□□□ -0.84
MSH4-201ENST00000263187 ADSSP30520 456 aa9.78□□□□□ -0.84
MSH4-201ENST00000263187 HOXA7P31268 230 aaPredicted RBP9.78□□□□□ -0.84
MSH4-201ENST00000263187 YWHABP31946 246 aaKnown RBP9.78□□□□□ -0.84
MSH4-201ENST00000263187 CHRNA3P32297 505 aa9.78□□□□□ -0.84
MSH4-201ENST00000263187 ADCY8P40145 1251 aa9.78□□□□□ -0.84
MSH4-201ENST00000263187 PSMC4P43686 418 aa9.78□□□□□ -0.84
MSH4-201ENST00000263187 RARRES1P49788 294 aa9.78□□□□□ -0.84
MSH4-201ENST00000263187 PPP2R5AQ15172 486 aa9.78□□□□□ -0.84
MSH4-201ENST00000263187 SEZ6Q53EL9 994 aa9.78□□□□□ -0.84
MSH4-201ENST00000263187 NUGGCQ68CJ6 796 aa9.78□□□□□ -0.84
MSH4-201ENST00000263187 CC2D2BQ6DHV5 1058 aa9.78□□□□□ -0.84
MSH4-201ENST00000263187 FAM47EQ6ZV65 393 aa9.78□□□□□ -0.84
MSH4-201ENST00000263187 INTS8Q75QN2 995 aaKnown RBP9.78□□□□□ -0.84
MSH4-201ENST00000263187 CCDC91Q7Z6B0 441 aa9.78□□□□□ -0.84
MSH4-201ENST00000263187 EXOC3L1Q86VI1 746 aa9.78□□□□□ -0.84
MSH4-201ENST00000263187 SPIRE2Q8WWL2 714 aa9.78□□□□□ -0.84
MSH4-201ENST00000263187 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.78□□□□□ -0.84
MSH4-201ENST00000263187 PRCCQ92733 491 aaPredicted RBP9.78□□□□□ -0.84
MSH4-201ENST00000263187 ARHGEF2Q92974 986 aaKnown RBP9.78□□□□□ -0.84
MSH4-201ENST00000263187 HAUS1Q96CS2 278 aa9.78□□□□□ -0.84
MSH4-201ENST00000263187 MASTLQ96GX5 879 aa9.78□□□□□ -0.84
MSH4-201ENST00000263187 ACCSQ96QU6 501 aa9.78□□□□□ -0.84
MSH4-201ENST00000263187 MKNK1Q9BUB5 465 aa9.78□□□□□ -0.84
MSH4-201ENST00000263187 AGAP1Q9UPQ3 857 aa9.78□□□□□ -0.84
MSH4-201ENST00000263187 PFASO15067 1338 aa9.78□□□□□ -0.84
MSH4-201ENST00000263187 TMEM120BA0PK00 339 aa9.78□□□□□ -0.84
MSH4-201ENST00000263187 YDJCA8MPS7 323 aa9.78□□□□□ -0.84
MSH4-201ENST00000263187 A8MUI8 341 aa9.78□□□□□ -0.84
MSH4-201ENST00000263187 BHMG1C9JSJ3 638 aaPredicted RBP9.78□□□□□ -0.84
MSH4-201ENST00000263187 ECEL1O95672 775 aa9.78□□□□□ -0.84
MSH4-201ENST00000263187 ZNF131P52739 623 aa9.78□□□□□ -0.84
MSH4-201ENST00000263187 DHX34Q14147 1143 aaKnown RBP9.78□□□□□ -0.84
MSH4-201ENST00000263187 SCARA3Q6AZY7 606 aa9.78□□□□□ -0.84
MSH4-201ENST00000263187 YTHDF3Q7Z739 585 aaKnown RBP9.78□□□□□ -0.84
MSH4-201ENST00000263187 CYP4X1Q8N118 509 aa9.78□□□□□ -0.84
MSH4-201ENST00000263187 BICD1Q96G01 975 aa9.78□□□□□ -0.84
MSH4-201ENST00000263187 ZNF317Q96PQ6 595 aaPredicted RBP9.78□□□□□ -0.84
MSH4-201ENST00000263187 PNMA3Q9UL41 463 aa9.78□□□□□ -0.84
MSH4-201ENST00000263187 MTUS1Q9ULD2 1270 aa9.78□□□□□ -0.84
MSH4-201ENST00000263187 TTC7AQ9ULT0 858 aaPredicted RBP9.78□□□□□ -0.84
MSH4-201ENST00000263187 FZD1Q9UP38 647 aa9.78□□□□□ -0.84
MSH4-201ENST00000263187 KIF13BQ9NQT8 1826 aa9.77□□□□□ -0.85
MSH4-201ENST00000263187 GSTTP1A0A1W2PQM5 241 aa9.77□□□□□ -0.85
MSH4-201ENST00000263187 FAM187AA6NFU0 413 aa9.77□□□□□ -0.85
MSH4-201ENST00000263187 CD58P19256 250 aa9.77□□□□□ -0.85
MSH4-201ENST00000263187 HMGB2P26583 209 aaKnown RBP9.77□□□□□ -0.85
MSH4-201ENST00000263187 MAPK4P31152 587 aa9.77□□□□□ -0.85
MSH4-201ENST00000263187 EIF3BP55884 814 aaKnown RBP9.77□□□□□ -0.85
MSH4-201ENST00000263187 KCNJ2P63252 427 aa9.77□□□□□ -0.85
MSH4-201ENST00000263187 ACCSLQ4AC99 568 aa9.77□□□□□ -0.85
MSH4-201ENST00000263187 CYFIP1Q7L576 1253 aa9.77□□□□□ -0.85
MSH4-201ENST00000263187 SRRM1Q8IYB3 904 aaKnown RBP9.77□□□□□ -0.85
MSH4-201ENST00000263187 ANKS4BQ8N8V4 417 aa9.77□□□□□ -0.85
MSH4-201ENST00000263187 TAAR1Q96RJ0 339 aa9.77□□□□□ -0.85
MSH4-201ENST00000263187 MXRA8Q9BRK3 442 aa9.77□□□□□ -0.85
MSH4-201ENST00000263187 FAM213AQ9BRX8 229 aa9.77□□□□□ -0.85
MSH4-201ENST00000263187 ZNF341Q9BYN7 854 aa9.77□□□□□ -0.85
MSH4-201ENST00000263187 NOCTQ9UK39 431 aaKnown RBP9.77□□□□□ -0.85
MSH4-201ENST00000263187 MRPL11Q9Y3B7 192 aaKnown RBP9.77□□□□□ -0.85
MSH4-201ENST00000263187 DENND3A2RUS2 1198 aa9.77□□□□□ -0.85
MSH4-201ENST00000263187 KLRG2A4D1S0 409 aaPredicted RBP9.77□□□□□ -0.85
MSH4-201ENST00000263187 SPAG7O75391 227 aa9.77□□□□□ -0.85
MSH4-201ENST00000263187 UBOX5O94941 541 aa9.77□□□□□ -0.85
MSH4-201ENST00000263187 RRM1P23921 792 aa9.77□□□□□ -0.85
MSH4-201ENST00000263187 MMP13P45452 471 aa9.77□□□□□ -0.85
MSH4-201ENST00000263187 MMP14P50281 582 aa9.77□□□□□ -0.85
MSH4-201ENST00000263187 PDE6CP51160 858 aa9.77□□□□□ -0.85
MSH4-201ENST00000263187 ITGA8P53708 1063 aa9.77□□□□□ -0.85
MSH4-201ENST00000263187 RWDD2BP57060 319 aa9.77□□□□□ -0.85
MSH4-201ENST00000263187 MPP2Q14168 576 aa9.77□□□□□ -0.85
MSH4-201ENST00000263187 ATP13A4Q4VNC1 1196 aa9.77□□□□□ -0.85
MSH4-201ENST00000263187 LBHD1Q9BQE6 289 aaPredicted RBP9.77□□□□□ -0.85
MSH4-201ENST00000263187 TACO1Q9BSH4 297 aaKnown RBP9.77□□□□□ -0.85
MSH4-201ENST00000263187 TMOD2Q9NZR1 351 aa9.77□□□□□ -0.85
MSH4-201ENST00000263187 PIK3CDO00329 1044 aa9.76□□□□□ -0.85
MSH4-201ENST00000263187 CHUKO15111 745 aa9.76□□□□□ -0.85
MSH4-201ENST00000263187 THAP12O43422 761 aa9.76□□□□□ -0.85
MSH4-201ENST00000263187 PDE6BP35913 854 aa9.76□□□□□ -0.85
MSH4-201ENST00000263187 MTMR1Q13613 665 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms