RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 USP17L5A8MUK1 530 aa8.9□□□□□ -0.98
LDB3-201ENST00000263066 DCDC2CA8MYV0 355 aa8.9□□□□□ -0.98
LDB3-201ENST00000263066 ATP5HO75947 161 aa8.9□□□□□ -0.98
LDB3-201ENST00000263066 TSPAN9O75954 239 aa8.9□□□□□ -0.98
LDB3-201ENST00000263066 HAUS5O94927 633 aa8.9□□□□□ -0.98
LDB3-201ENST00000263066 EIF3BP55884 814 aaKnown RBP8.9□□□□□ -0.98
LDB3-201ENST00000263066 CUL1Q13616 776 aa8.9□□□□□ -0.98
LDB3-201ENST00000263066 KRT72Q14CN4 511 aa8.9□□□□□ -0.98
LDB3-201ENST00000263066 TRADDQ15628 312 aa8.9□□□□□ -0.98
LDB3-201ENST00000263066 SGSM1Q2NKQ1 1148 aa8.9□□□□□ -0.98
LDB3-201ENST00000263066 Q3C1V9 767 aa8.9□□□□□ -0.98
LDB3-201ENST00000263066 AGBL2Q5U5Z8 902 aa8.9□□□□□ -0.98
LDB3-201ENST00000263066 LRIG3Q6UXM1 1119 aa8.9□□□□□ -0.98
LDB3-201ENST00000263066 STOX1Q6ZVD7 989 aa8.9□□□□□ -0.98
LDB3-201ENST00000263066 UTS2BQ765I0 119 aa8.9□□□□□ -0.98
LDB3-201ENST00000263066 MARK2Q7KZI7 788 aaKnown RBP8.9□□□□□ -0.98
LDB3-201ENST00000263066 TRIML2Q8N7C3 387 aa8.9□□□□□ -0.98
LDB3-201ENST00000263066 STKLD1Q8NE28 680 aa8.9□□□□□ -0.98
LDB3-201ENST00000263066 DEPTORQ8TB45 409 aa8.9□□□□□ -0.98
LDB3-201ENST00000263066 PTPRN2Q92932 1015 aa8.9□□□□□ -0.98
LDB3-201ENST00000263066 CCDC127Q96BQ5 260 aa8.9□□□□□ -0.98
LDB3-201ENST00000263066 DBR1Q9UK59 544 aaKnown RBP8.9□□□□□ -0.98
LDB3-201ENST00000263066 SUGT1Q9Y2Z0 365 aa8.9□□□□□ -0.98
LDB3-201ENST00000263066 GMEB1Q9Y692 573 aa8.9□□□□□ -0.98
LDB3-201ENST00000263066 UNCXA6NJT0 531 aa8.9□□□□□ -0.98
LDB3-201ENST00000263066 PEX10O60683 326 aa8.9□□□□□ -0.98
LDB3-201ENST00000263066 HSPA8P11142 646 aaKnown RBP8.9□□□□□ -0.98
LDB3-201ENST00000263066 BCRP11274 1271 aa8.9□□□□□ -0.98
LDB3-201ENST00000263066 MX2P20592 715 aa8.9□□□□□ -0.98
LDB3-201ENST00000263066 RHBDL3P58872 404 aa8.9□□□□□ -0.98
LDB3-201ENST00000263066 BYSLQ13895 437 aaKnown RBP8.9□□□□□ -0.98
LDB3-201ENST00000263066 MMEL1Q495T6 779 aa8.9□□□□□ -0.98
LDB3-201ENST00000263066 C6orf118Q5T5N4 469 aa8.9□□□□□ -0.98
LDB3-201ENST00000263066 CCSAPQ6IQ19 270 aaPredicted RBP8.9□□□□□ -0.98
LDB3-201ENST00000263066 DIS3L2Q8IYB7 885 aaKnown RBP8.9□□□□□ -0.98
LDB3-201ENST00000263066 FANCBQ8NB91 859 aa8.9□□□□□ -0.98
LDB3-201ENST00000263066 RBM46Q8TBY0 533 aaKnown RBP8.9□□□□□ -0.98
LDB3-201ENST00000263066 BHMTQ93088 406 aa8.9□□□□□ -0.98
LDB3-201ENST00000263066 PIGSQ96S52 555 aa8.9□□□□□ -0.98
LDB3-201ENST00000263066 CEP44Q9C0F1 390 aa8.9□□□□□ -0.98
LDB3-201ENST00000263066 KLHL25Q9H0H3 589 aa8.9□□□□□ -0.98
LDB3-201ENST00000263066 EPB41L4AQ9HCS5 686 aaPredicted RBP8.9□□□□□ -0.98
LDB3-201ENST00000263066 DDX4Q9NQI0 724 aaKnown RBP8.9□□□□□ -0.98
LDB3-201ENST00000263066 CAPN6Q9Y6Q1 641 aa8.9□□□□□ -0.98
LDB3-201ENST00000263066 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.9□□□□□ -0.99
LDB3-201ENST00000263066 LRRC10BA6NIK2 292 aa8.9□□□□□ -0.99
LDB3-201ENST00000263066 BTBD18B2RXH4 712 aa8.9□□□□□ -0.99
LDB3-201ENST00000263066 ASAP2O43150 1006 aa8.9□□□□□ -0.99
LDB3-201ENST00000263066 PENKP01210 267 aaPredicted RBP8.9□□□□□ -0.99
LDB3-201ENST00000263066 PDIA3P30101 505 aaKnown RBP8.9□□□□□ -0.99
LDB3-201ENST00000263066 EIF4A3P38919 411 aaKnown RBP8.9□□□□□ -0.99
LDB3-201ENST00000263066 HALP42357 657 aa8.9□□□□□ -0.99
LDB3-201ENST00000263066 TXKP42681 527 aa8.9□□□□□ -0.99
LDB3-201ENST00000263066 HDAC4P56524 1084 aa8.9□□□□□ -0.99
LDB3-201ENST00000263066 MTMR2Q13614 643 aa8.9□□□□□ -0.99
LDB3-201ENST00000263066 COL9A3Q14050 684 aaPredicted RBP8.9□□□□□ -0.99
LDB3-201ENST00000263066 LRRC74BQ6ZQY2 392 aa8.9□□□□□ -0.99
LDB3-201ENST00000263066 CSGALNACT2Q8N6G5 542 aa8.9□□□□□ -0.99
LDB3-201ENST00000263066 ACER1Q8TDN7 264 aa8.9□□□□□ -0.99
LDB3-201ENST00000263066 DQX1Q8TE96 717 aaKnown RBP8.9□□□□□ -0.99
LDB3-201ENST00000263066 HPS3Q969F9 1004 aa8.9□□□□□ -0.99
LDB3-201ENST00000263066 FNBP1Q96RU3 617 aa8.9□□□□□ -0.99
LDB3-201ENST00000263066 NT5C3AQ9H0P0 336 aa8.9□□□□□ -0.99
LDB3-201ENST00000263066 PCDHA1Q9Y5I3 950 aa8.9□□□□□ -0.99
LDB3-201ENST00000263066 IKBKGQ9Y6K9 419 aa8.9□□□□□ -0.99
LDB3-201ENST00000263066 FLT1P17948 1338 aa8.9□□□□□ -0.99
LDB3-201ENST00000263066 CFAP69A5D8W1 941 aa8.89□□□□□ -0.99
LDB3-201ENST00000263066 YDJCA8MPS7 323 aa8.89□□□□□ -0.99
LDB3-201ENST00000263066 RARAP10276 462 aa8.89□□□□□ -0.99
LDB3-201ENST00000263066 VEGFAP15692 232 aaPredicted RBP8.89□□□□□ -0.99
LDB3-201ENST00000263066 ATP5DP30049 168 aa8.89□□□□□ -0.99
LDB3-201ENST00000263066 CETN2P41208 172 aa8.89□□□□□ -0.99
LDB3-201ENST00000263066 RTP1P59025 263 aa8.89□□□□□ -0.99
LDB3-201ENST00000263066 CCDC153Q494R4 210 aa8.89□□□□□ -0.99
LDB3-201ENST00000263066 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.89□□□□□ -0.99
LDB3-201ENST00000263066 ERMNQ8TAM6 284 aa8.89□□□□□ -0.99
LDB3-201ENST00000263066 WASF1Q92558 559 aa8.89□□□□□ -0.99
LDB3-201ENST00000263066 RAVER2Q9HCJ3 691 aaKnown RBP8.89□□□□□ -0.99
LDB3-201ENST00000263066 CIDEBQ9UHD4 219 aa8.89□□□□□ -0.99
LDB3-201ENST00000263066 AMACRQ9UHK6 382 aa8.89□□□□□ -0.99
LDB3-201ENST00000263066 DCTN4Q9UJW0 460 aa8.89□□□□□ -0.99
LDB3-201ENST00000263066 PLCH1Q4KWH8 1693 aa8.89□□□□□ -0.99
LDB3-201ENST00000263066 DCTN3O75935 186 aa8.89□□□□□ -0.99
LDB3-201ENST00000263066 ASMTLO95671 621 aa8.89□□□□□ -0.99
LDB3-201ENST00000263066 GSTT2P0CG29 244 aa8.89□□□□□ -0.99
LDB3-201ENST00000263066 GSTT2BP0CG30 244 aa8.89□□□□□ -0.99
LDB3-201ENST00000263066 KRT10P13645 584 aa8.89□□□□□ -0.99
LDB3-201ENST00000263066 NOP14P78316 857 aaKnown RBP8.89□□□□□ -0.99
LDB3-201ENST00000263066 BASP1P80723 227 aaKnown RBP8.89□□□□□ -0.99
LDB3-201ENST00000263066 PABPC4Q13310 644 aaKnown RBP eCLIP8.89□□□□□ -0.99
LDB3-201ENST00000263066 THOC5Q13769 683 aaKnown RBP8.89□□□□□ -0.99
LDB3-201ENST00000263066 UBE2SQ16763 222 aa8.89□□□□□ -0.99
LDB3-201ENST00000263066 SLC9C1Q4G0N8 1177 aa8.89□□□□□ -0.99
LDB3-201ENST00000263066 SH3D19Q5HYK7 790 aa8.89□□□□□ -0.99
LDB3-201ENST00000263066 ZFYVE27Q5T4F4 411 aa8.89□□□□□ -0.99
LDB3-201ENST00000263066 STK33Q9BYT3 514 aa8.89□□□□□ -0.99
LDB3-201ENST00000263066 ZFP69BQ9UJL9 534 aa8.89□□□□□ -0.99
LDB3-201ENST00000263066 LAMB4A4D0S4 1761 aa8.89□□□□□ -0.99
LDB3-201ENST00000263066 ARFGEF2Q9Y6D5 1785 aa8.89□□□□□ -0.99
LDB3-201ENST00000263066 E7ENQ6 273 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms