RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 ICA1Q05084 483 aa16.95■□□□□ 0.3
PRPF40B-201ENST00000261897 TCP10Q12799 353 aa16.95■□□□□ 0.3
PRPF40B-201ENST00000261897 PPP2R5CQ13362 524 aa16.95■□□□□ 0.3
PRPF40B-201ENST00000261897 C1orf146Q5VVC0 180 aa16.95■□□□□ 0.3
PRPF40B-201ENST00000261897 IZUMO2Q6UXV1 221 aa16.95■□□□□ 0.3
PRPF40B-201ENST00000261897 SLC13A5Q86YT5 568 aaPredicted RBP16.95■□□□□ 0.3
PRPF40B-201ENST00000261897 ZNF513Q8N8E2 541 aaPredicted RBP16.95■□□□□ 0.3
PRPF40B-201ENST00000261897 C1orf131Q8NDD1 294 aaKnown RBP16.95■□□□□ 0.3
PRPF40B-201ENST00000261897 THTPAQ9BU02 230 aa16.95■□□□□ 0.3
PRPF40B-201ENST00000261897 GRHL1Q9NZI5 618 aa16.95■□□□□ 0.3
PRPF40B-201ENST00000261897 LRRC37A3O60309 1634 aa16.95■□□□□ 0.3
PRPF40B-201ENST00000261897 KAT6AQ92794 2004 aa16.95■□□□□ 0.3
PRPF40B-201ENST00000261897 NWD2Q9ULI1 1742 aa16.95■□□□□ 0.3
PRPF40B-201ENST00000261897 PEX11AO75192 247 aa16.95■□□□□ 0.3
PRPF40B-201ENST00000261897 DDX18Q9NVP1 670 aaKnown RBP16.95■□□□□ 0.3
PRPF40B-201ENST00000261897 RIMBP2O15034 1052 aa16.95■□□□□ 0.3
PRPF40B-201ENST00000261897 USP1O94782 785 aa16.95■□□□□ 0.3
PRPF40B-201ENST00000261897 SERPINB3P29508 390 aa16.95■□□□□ 0.3
PRPF40B-201ENST00000261897 CCNFP41002 786 aa16.95■□□□□ 0.3
PRPF40B-201ENST00000261897 PKN2Q16513 984 aaKnown RBP16.95■□□□□ 0.3
PRPF40B-201ENST00000261897 LLGL2Q6P1M3 1020 aa16.95■□□□□ 0.3
PRPF40B-201ENST00000261897 VSTM1Q6UX27 236 aa16.95■□□□□ 0.3
PRPF40B-201ENST00000261897 MIPOL1Q8TD10 442 aa16.95■□□□□ 0.3
PRPF40B-201ENST00000261897 ZNF384Q8TF68 577 aa16.95■□□□□ 0.3
PRPF40B-201ENST00000261897 AGPAT1Q99943 283 aa16.95■□□□□ 0.3
PRPF40B-201ENST00000261897 GORASP1Q9BQQ3 440 aa16.95■□□□□ 0.3
PRPF40B-201ENST00000261897 BANF1O75531 89 aa16.94■□□□□ 0.3
PRPF40B-201ENST00000261897 RTN3O95197 1032 aaPredicted RBP16.94■□□□□ 0.3
PRPF40B-201ENST00000261897 TMEM253P0C7T8 217 aa16.94■□□□□ 0.3
PRPF40B-201ENST00000261897 PCP11498 1178 aaKnown RBP16.94■□□□□ 0.3
PRPF40B-201ENST00000261897 ATP6V1B1P15313 513 aa16.94■□□□□ 0.3
PRPF40B-201ENST00000261897 RGS9BPQ6ZS82 235 aa16.94■□□□□ 0.3
PRPF40B-201ENST00000261897 SLC51AQ86UW1 340 aa16.94■□□□□ 0.3
PRPF40B-201ENST00000261897 RBBP8NLQ8NC74 664 aaPredicted RBP16.94■□□□□ 0.3
PRPF40B-201ENST00000261897 CNKSR1Q969H4 720 aa16.94■□□□□ 0.3
PRPF40B-201ENST00000261897 ZSWIM1Q9BR11 485 aa16.94■□□□□ 0.3
PRPF40B-201ENST00000261897 TMX4Q9H1E5 349 aaPredicted RBP16.94■□□□□ 0.3
PRPF40B-201ENST00000261897 CHKBQ9Y259 395 aa16.94■□□□□ 0.3
PRPF40B-201ENST00000261897 WASF2Q9Y6W5 498 aa16.94■□□□□ 0.3
PRPF40B-201ENST00000261897 CFBP00751 764 aa16.94■□□□□ 0.3
PRPF40B-201ENST00000261897 HNRNPCP07910 306 aaKnown RBP eCLIP16.94■□□□□ 0.3
PRPF40B-201ENST00000261897 PDE1CQ14123 709 aaPredicted RBP16.94■□□□□ 0.3
PRPF40B-201ENST00000261897 DBN1Q16643 649 aa16.94■□□□□ 0.3
PRPF40B-201ENST00000261897 P3H1Q32P28 736 aa16.94■□□□□ 0.3
PRPF40B-201ENST00000261897 SLC35C1Q96A29 364 aa16.94■□□□□ 0.3
PRPF40B-201ENST00000261897 LZTS2Q9BRK4 669 aa16.94■□□□□ 0.3
PRPF40B-201ENST00000261897 DCLRE1BQ9H816 532 aa16.94■□□□□ 0.3
PRPF40B-201ENST00000261897 NRXN3Q9Y4C0 1643 aa16.94■□□□□ 0.3
PRPF40B-201ENST00000261897 ATP2A1O14983 1001 aa16.94■□□□□ 0.3
PRPF40B-201ENST00000261897 KRT4P19013 534 aa16.94■□□□□ 0.3
PRPF40B-201ENST00000261897 RASA1P20936 1047 aa16.94■□□□□ 0.3
PRPF40B-201ENST00000261897 FMO5P49326 533 aa16.94■□□□□ 0.3
PRPF40B-201ENST00000261897 SP4Q02446 784 aa16.94■□□□□ 0.3
PRPF40B-201ENST00000261897 MGAT5Q09328 741 aa16.94■□□□□ 0.3
PRPF40B-201ENST00000261897 BBS9Q3SYG4 887 aa16.94■□□□□ 0.3
PRPF40B-201ENST00000261897 CBWD6Q4V339 395 aa16.94■□□□□ 0.3
PRPF40B-201ENST00000261897 CBWD3Q5JTY5 395 aa16.94■□□□□ 0.3
PRPF40B-201ENST00000261897 CBWD5Q5RIA9 395 aa16.94■□□□□ 0.3
PRPF40B-201ENST00000261897 EMC10Q5UCC4 262 aa16.94■□□□□ 0.3
PRPF40B-201ENST00000261897 RHOT2Q8IXI1 618 aa16.94■□□□□ 0.3
PRPF40B-201ENST00000261897 SNF8Q96H20 258 aa16.94■□□□□ 0.3
PRPF40B-201ENST00000261897 HIC2Q96JB3 615 aa16.94■□□□□ 0.3
PRPF40B-201ENST00000261897 BTG4Q9NY30 223 aa16.94■□□□□ 0.3
PRPF40B-201ENST00000261897 ZNF652Q9Y2D9 606 aa16.94■□□□□ 0.3
PRPF40B-201ENST00000261897 B2RBV5 119 aa16.93■□□□□ 0.3
PRPF40B-201ENST00000261897 TISP43B9A030 160 aa16.93■□□□□ 0.3
PRPF40B-201ENST00000261897 DNAJC6O75061 913 aa16.93■□□□□ 0.3
PRPF40B-201ENST00000261897 TTC4O95801 387 aa16.93■□□□□ 0.3
PRPF40B-201ENST00000261897 FESP07332 822 aa16.93■□□□□ 0.3
PRPF40B-201ENST00000261897 GM2AP17900 193 aa16.93■□□□□ 0.3
PRPF40B-201ENST00000261897 RPA3P35244 121 aaPredicted RBP16.93■□□□□ 0.3
PRPF40B-201ENST00000261897 CRKLP46109 303 aaKnown RBP16.93■□□□□ 0.3
PRPF40B-201ENST00000261897 RAB3IL1Q8TBN0 382 aa16.93■□□□□ 0.3
PRPF40B-201ENST00000261897 TBC1D16Q8TBP0 767 aa16.93■□□□□ 0.3
PRPF40B-201ENST00000261897 GINM1Q9NU53 330 aa16.93■□□□□ 0.3
PRPF40B-201ENST00000261897 CLIC5Q9NZA1 410 aa16.93■□□□□ 0.3
PRPF40B-201ENST00000261897 EMSYQ7Z589 1322 aa16.93■□□□□ 0.3
PRPF40B-201ENST00000261897 ARFIP2P53365 341 aa16.93■□□□□ 0.3
PRPF40B-201ENST00000261897 K7ENM7 598 aa16.93■□□□□ 0.3
PRPF40B-201ENST00000261897 SGK1O00141 431 aa16.93■□□□□ 0.3
PRPF40B-201ENST00000261897 DDX3YO15523 660 aaKnown RBP16.93■□□□□ 0.3
PRPF40B-201ENST00000261897 SGPL1O95470 568 aa16.93■□□□□ 0.3
PRPF40B-201ENST00000261897 LDHCP07864 332 aa16.93■□□□□ 0.3
PRPF40B-201ENST00000261897 ZSCAN5DPP0CG00 497 aa16.93■□□□□ 0.3
PRPF40B-201ENST00000261897 TAC1P20366 129 aa16.93■□□□□ 0.3
PRPF40B-201ENST00000261897 INHBEP58166 350 aa16.93■□□□□ 0.3
PRPF40B-201ENST00000261897 MCL1Q07820 350 aa16.93■□□□□ 0.3
PRPF40B-201ENST00000261897 MAP7Q14244 749 aa16.93■□□□□ 0.3
PRPF40B-201ENST00000261897 KIF22Q14807 665 aa16.93■□□□□ 0.3
PRPF40B-201ENST00000261897 MTFR1Q15390 333 aa16.93■□□□□ 0.3
PRPF40B-201ENST00000261897 LRRC74BQ6ZQY2 392 aa16.93■□□□□ 0.3
PRPF40B-201ENST00000261897 FRMD5Q7Z6J6 570 aa16.93■□□□□ 0.3
PRPF40B-201ENST00000261897 MAGEB18Q96M61 343 aa16.93■□□□□ 0.3
PRPF40B-201ENST00000261897 PALM3A6NDB9 673 aaPredicted RBP16.92■□□□□ 0.3
PRPF40B-201ENST00000261897 HSPA1LP34931 641 aa16.92■□□□□ 0.3
PRPF40B-201ENST00000261897 CERKLQ49MI3 558 aaPredicted RBP16.92■□□□□ 0.3
PRPF40B-201ENST00000261897 TRMT10CQ7L0Y3 403 aaKnown RBP16.92■□□□□ 0.3
PRPF40B-201ENST00000261897 TRIM74Q86UV6 250 aa16.92■□□□□ 0.3
PRPF40B-201ENST00000261897 TRIM73Q86UV7 250 aa16.92■□□□□ 0.3
PRPF40B-201ENST00000261897 CATSPER3Q86XQ3 398 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms