RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 RECQL4O94761 1208 aa20.48■□□□□ 0.87
CYSTM1-201ENST00000261811 PPM1AP35813 382 aa20.48■□□□□ 0.87
CYSTM1-201ENST00000261811 DPYDQ12882 1025 aa20.48■□□□□ 0.87
CYSTM1-201ENST00000261811 GRIN2CQ14957 1233 aa20.48■□□□□ 0.87
CYSTM1-201ENST00000261811 KMT5BQ4FZB7 885 aa20.48■□□□□ 0.87
CYSTM1-201ENST00000261811 POMGNT1Q8WZA1 660 aa20.48■□□□□ 0.87
CYSTM1-201ENST00000261811 ZBTB45Q96K62 511 aaPredicted RBP20.48■□□□□ 0.87
CYSTM1-201ENST00000261811 MSTO1Q9BUK6 570 aa20.48■□□□□ 0.87
CYSTM1-201ENST00000261811 PRDM12Q9H4Q4 367 aa20.48■□□□□ 0.87
CYSTM1-201ENST00000261811 TBC1D13Q9NVG8 400 aa20.48■□□□□ 0.87
CYSTM1-201ENST00000261811 MTMR10Q9NXD2 777 aa20.48■□□□□ 0.87
CYSTM1-201ENST00000261811 ANK1P16157 1881 aa20.47■□□□□ 0.87
CYSTM1-201ENST00000261811 OGTO15294 1046 aa20.47■□□□□ 0.87
CYSTM1-201ENST00000261811 PRPF6O94906 941 aaKnown RBP20.47■□□□□ 0.87
CYSTM1-201ENST00000261811 LDHAP00338 332 aaKnown RBP20.47■□□□□ 0.87
CYSTM1-201ENST00000261811 POMCP01189 267 aa20.47■□□□□ 0.87
CYSTM1-201ENST00000261811 CASP5P51878 434 aa20.47■□□□□ 0.87
CYSTM1-201ENST00000261811 OSTNP61366 133 aa20.47■□□□□ 0.87
CYSTM1-201ENST00000261811 EHHADHQ08426 723 aa20.47■□□□□ 0.87
CYSTM1-201ENST00000261811 GRIK3Q13003 919 aa20.47■□□□□ 0.87
CYSTM1-201ENST00000261811 GPM6BQ13491 265 aa20.47■□□□□ 0.87
CYSTM1-201ENST00000261811 KCNB1Q14721 858 aa20.47■□□□□ 0.87
CYSTM1-201ENST00000261811 PTPROQ16827 1216 aa20.47■□□□□ 0.87
CYSTM1-201ENST00000261811 ZNF507Q8TCN5 953 aa20.47■□□□□ 0.87
CYSTM1-201ENST00000261811 GBP3Q9H0R5 595 aa20.47■□□□□ 0.87
CYSTM1-201ENST00000261811 CWH43Q9H720 699 aa20.47■□□□□ 0.87
CYSTM1-201ENST00000261811 SLC39A2Q9NP94 309 aa20.47■□□□□ 0.87
CYSTM1-201ENST00000261811 KLK14Q9P0G3 267 aa20.47■□□□□ 0.87
CYSTM1-201ENST00000261811 A0A0B4J269 797 aa20.46■□□□□ 0.87
CYSTM1-201ENST00000261811 H3BNC9 293 aa20.46■□□□□ 0.87
CYSTM1-201ENST00000261811 KIAA0391O15091 583 aaKnown RBP20.46■□□□□ 0.87
CYSTM1-201ENST00000261811 KLRC4O43908 158 aa20.46■□□□□ 0.87
CYSTM1-201ENST00000261811 ZC3H11AO75152 810 aaKnown RBP eCLIP20.46■□□□□ 0.87
CYSTM1-201ENST00000261811 ARHGEF15O94989 841 aa20.46■□□□□ 0.87
CYSTM1-201ENST00000261811 ALDH2P05091 517 aa20.46■□□□□ 0.87
CYSTM1-201ENST00000261811 THP07101 528 aa20.46■□□□□ 0.87
CYSTM1-201ENST00000261811 CLTAP09496 248 aa20.46■□□□□ 0.87
CYSTM1-201ENST00000261811 SCNN1GP51170 649 aa20.46■□□□□ 0.87
CYSTM1-201ENST00000261811 SNRPFP62306 86 aaKnown RBP20.46■□□□□ 0.87
CYSTM1-201ENST00000261811 KRT17Q04695 432 aa20.46■□□□□ 0.87
CYSTM1-201ENST00000261811 KCNT2Q6UVM3 1135 aa20.46■□□□□ 0.87
CYSTM1-201ENST00000261811 HS2ST1Q7LGA3 356 aa20.46■□□□□ 0.87
CYSTM1-201ENST00000261811 COLGALT1Q8NBJ5 622 aa20.46■□□□□ 0.87
CYSTM1-201ENST00000261811 HPS3Q969F9 1004 aa20.46■□□□□ 0.87
CYSTM1-201ENST00000261811 SMARCE1Q969G3 411 aa20.46■□□□□ 0.87
CYSTM1-201ENST00000261811 ZFP42Q96MM3 310 aa20.46■□□□□ 0.87
CYSTM1-201ENST00000261811 GSDMAQ96QA5 445 aa20.46■□□□□ 0.87
CYSTM1-201ENST00000261811 TMEM175Q9BSA9 504 aa20.46■□□□□ 0.87
CYSTM1-201ENST00000261811 CGNQ9P2M7 1197 aaKnown RBP20.46■□□□□ 0.87
CYSTM1-201ENST00000261811 STK39Q9UEW8 545 aa20.46■□□□□ 0.87
CYSTM1-201ENST00000261811 PUF60Q9UHX1 559 aaKnown RBP20.46■□□□□ 0.87
CYSTM1-201ENST00000261811 AGO2Q9UKV8 859 aaKnown RBP20.46■□□□□ 0.87
CYSTM1-201ENST00000261811 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.46■□□□□ 0.87
CYSTM1-201ENST00000261811 STYXL1Q9Y6J8 313 aa20.46■□□□□ 0.87
CYSTM1-201ENST00000261811 CHD9Q3L8U1 2897 aa20.45■□□□□ 0.86
CYSTM1-201ENST00000261811 ABLIM1O14639 778 aa20.45■□□□□ 0.86
CYSTM1-201ENST00000261811 RHOBTB3O94955 611 aa20.45■□□□□ 0.86
CYSTM1-201ENST00000261811 PRR29P0C7W0 189 aa20.45■□□□□ 0.86
CYSTM1-201ENST00000261811 GARTP22102 1010 aa20.45■□□□□ 0.86
CYSTM1-201ENST00000261811 LRRC55Q6ZSA7 311 aa20.45■□□□□ 0.86
CYSTM1-201ENST00000261811 EPM2AIP1Q7L775 607 aaPredicted RBP20.45■□□□□ 0.86
CYSTM1-201ENST00000261811 CDX2Q99626 313 aaPredicted RBP20.45■□□□□ 0.86
CYSTM1-201ENST00000261811 LMAN2LQ9H0V9 348 aa20.45■□□□□ 0.86
CYSTM1-201ENST00000261811 RPF1Q9H9Y2 349 aaKnown RBP20.45■□□□□ 0.86
CYSTM1-201ENST00000261811 PLEKHA5Q9HAU0 1116 aa20.45■□□□□ 0.86
CYSTM1-201ENST00000261811 SLC38A7Q9NVC3 462 aa20.45■□□□□ 0.86
CYSTM1-201ENST00000261811 SPG21Q9NZD8 308 aa20.45■□□□□ 0.86
CYSTM1-201ENST00000261811 LMCD1Q9NZU5 365 aa20.45■□□□□ 0.86
CYSTM1-201ENST00000261811 ANKRD63C9JTQ0 380 aa20.44■□□□□ 0.86
CYSTM1-201ENST00000261811 BCAR1P56945 870 aa20.44■□□□□ 0.86
CYSTM1-201ENST00000261811 POU5F1Q01860 360 aaKnown RBP20.44■□□□□ 0.86
CYSTM1-201ENST00000261811 UBE3AQ05086 875 aa20.44■□□□□ 0.86
CYSTM1-201ENST00000261811 KCNA1Q09470 495 aa20.44■□□□□ 0.86
CYSTM1-201ENST00000261811 PNOCQ13519 176 aa20.44■□□□□ 0.86
CYSTM1-201ENST00000261811 BMS1Q14692 1282 aaKnown RBP20.44■□□□□ 0.86
CYSTM1-201ENST00000261811 ARMCX5Q6P1M9 558 aa20.44■□□□□ 0.86
CYSTM1-201ENST00000261811 CD302Q8IX05 232 aa20.44■□□□□ 0.86
CYSTM1-201ENST00000261811 CEP120Q8N960 986 aa20.44■□□□□ 0.86
CYSTM1-201ENST00000261811 GOLGA5Q8TBA6 731 aa20.44■□□□□ 0.86
CYSTM1-201ENST00000261811 TSPAN18Q96SJ8 248 aa20.44■□□□□ 0.86
CYSTM1-201ENST00000261811 NRDE2Q9H7Z3 1164 aa20.44■□□□□ 0.86
CYSTM1-201ENST00000261811 FAN1Q9Y2M0 1017 aa20.44■□□□□ 0.86
CYSTM1-201ENST00000261811 FOSL2P15408 326 aa20.43■□□□□ 0.86
CYSTM1-201ENST00000261811 IGFBP4P22692 258 aa20.43■□□□□ 0.86
CYSTM1-201ENST00000261811 PPP2R3AQ06190 1150 aa20.43■□□□□ 0.86
CYSTM1-201ENST00000261811 STK4Q13043 487 aa20.43■□□□□ 0.86
CYSTM1-201ENST00000261811 KNOP1Q1ED39 458 aaKnown RBP20.43■□□□□ 0.86
CYSTM1-201ENST00000261811 BMT2Q1RMZ1 405 aa20.43■□□□□ 0.86
CYSTM1-201ENST00000261811 KLHL23Q8NBE8 558 aa20.43■□□□□ 0.86
CYSTM1-201ENST00000261811 TMEM169Q96HH4 297 aa20.43■□□□□ 0.86
CYSTM1-201ENST00000261811 FGFBP2Q9BYJ0 223 aa20.43■□□□□ 0.86
CYSTM1-201ENST00000261811 TRANK1O15050 2925 aa20.42■□□□□ 0.86
CYSTM1-201ENST00000261811 XPOTO43592 962 aaKnown RBP20.42■□□□□ 0.86
CYSTM1-201ENST00000261811 FGF18O76093 207 aa20.42■□□□□ 0.86
CYSTM1-201ENST00000261811 LINC00271P0C7V0 271 aa20.42■□□□□ 0.86
CYSTM1-201ENST00000261811 TUSC3Q13454 348 aa20.42■□□□□ 0.86
CYSTM1-201ENST00000261811 SLC39A4Q6P5W5 647 aa20.42■□□□□ 0.86
CYSTM1-201ENST00000261811 NELFCDQ8IXH7 590 aa20.42■□□□□ 0.86
CYSTM1-201ENST00000261811 GDPD5Q8WTR4 605 aa20.42■□□□□ 0.86
CYSTM1-201ENST00000261811 SCFD1Q8WVM8 642 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms