RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 KRT27Q7Z3Y8 459 aa10.32□□□□□ -0.76
CTDSPL2-201ENST00000260327 RANBP17Q9H2T7 1088 aaKnown RBP10.32□□□□□ -0.76
CTDSPL2-201ENST00000260327 ATP11BQ9Y2G3 1177 aa10.32□□□□□ -0.76
CTDSPL2-201ENST00000260327 FAM47DPA6NHR8 397 aa10.31□□□□□ -0.76
CTDSPL2-201ENST00000260327 KPNA7A9QM74 516 aa10.31□□□□□ -0.76
CTDSPL2-201ENST00000260327 GYS1P13807 737 aa10.31□□□□□ -0.76
CTDSPL2-201ENST00000260327 VCAM1P19320 739 aa10.31□□□□□ -0.76
CTDSPL2-201ENST00000260327 HOXA7P31268 230 aaPredicted RBP10.31□□□□□ -0.76
CTDSPL2-201ENST00000260327 NKX1-1Q15270 411 aaPredicted RBP10.31□□□□□ -0.76
CTDSPL2-201ENST00000260327 RBM43Q6ZSC3 357 aaKnown RBP10.31□□□□□ -0.76
CTDSPL2-201ENST00000260327 MIGA2Q7L4E1 593 aa10.31□□□□□ -0.76
CTDSPL2-201ENST00000260327 ERICH1Q86X53 443 aa10.31□□□□□ -0.76
CTDSPL2-201ENST00000260327 MMGT1Q8N4V1 131 aa10.31□□□□□ -0.76
CTDSPL2-201ENST00000260327 RBM41Q96IZ5 413 aaKnown RBP10.31□□□□□ -0.76
CTDSPL2-201ENST00000260327 PPP1R16BQ96T49 567 aa10.31□□□□□ -0.76
CTDSPL2-201ENST00000260327 TMEM94Q12767 1356 aa10.31□□□□□ -0.76
CTDSPL2-201ENST00000260327 GTPBP10A4D1E9 387 aaKnown RBP10.31□□□□□ -0.76
CTDSPL2-201ENST00000260327 OVGP1Q12889 678 aa10.31□□□□□ -0.76
CTDSPL2-201ENST00000260327 ANGPTL8Q6UXH0 198 aa10.31□□□□□ -0.76
CTDSPL2-201ENST00000260327 ZNF513Q8N8E2 541 aaPredicted RBP10.31□□□□□ -0.76
CTDSPL2-201ENST00000260327 ATP11CQ8NB49 1132 aa10.31□□□□□ -0.76
CTDSPL2-201ENST00000260327 RFFLQ8WZ73 363 aa10.31□□□□□ -0.76
CTDSPL2-201ENST00000260327 NRBP2Q9NSY0 501 aa10.31□□□□□ -0.76
CTDSPL2-201ENST00000260327 AKAP10O43572 662 aa10.31□□□□□ -0.76
CTDSPL2-201ENST00000260327 HNRNPCL1O60812 293 aaKnown RBP10.31□□□□□ -0.76
CTDSPL2-201ENST00000260327 NAALADL2Q58DX5 795 aa10.31□□□□□ -0.76
CTDSPL2-201ENST00000260327 BARGINQ6ZT62 677 aa10.31□□□□□ -0.76
CTDSPL2-201ENST00000260327 ARHGAP22Q7Z5H3 698 aa10.31□□□□□ -0.76
CTDSPL2-201ENST00000260327 NIM1KQ8IY84 436 aa10.31□□□□□ -0.76
CTDSPL2-201ENST00000260327 SLC35G2Q8TBE7 412 aa10.31□□□□□ -0.76
CTDSPL2-201ENST00000260327 ADPGKQ9BRR6 497 aa10.31□□□□□ -0.76
CTDSPL2-201ENST00000260327 MXD3Q9BW11 206 aa10.31□□□□□ -0.76
CTDSPL2-201ENST00000260327 SUN2Q9UH99 717 aa10.31□□□□□ -0.76
CTDSPL2-201ENST00000260327 PCSK1NQ9UHG2 260 aa10.31□□□□□ -0.76
CTDSPL2-201ENST00000260327 CDC42BPGQ6DT37 1551 aa10.31□□□□□ -0.76
CTDSPL2-201ENST00000260327 TSPOAP1O95153 1857 aa10.31□□□□□ -0.76
CTDSPL2-201ENST00000260327 ACADSP16219 412 aa10.31□□□□□ -0.76
CTDSPL2-201ENST00000260327 HLA-DPA1P20036 260 aa10.31□□□□□ -0.76
CTDSPL2-201ENST00000260327 CATSPER1Q8NEC5 780 aa10.31□□□□□ -0.76
CTDSPL2-201ENST00000260327 SHCBP1LQ9BZQ2 653 aa10.31□□□□□ -0.76
CTDSPL2-201ENST00000260327 EHD4Q9H223 541 aa10.31□□□□□ -0.76
CTDSPL2-201ENST00000260327 CAAP1Q9H8G2 361 aa10.31□□□□□ -0.76
CTDSPL2-201ENST00000260327 SLC16A4O15374 487 aa10.31□□□□□ -0.76
CTDSPL2-201ENST00000260327 RHOBTB3O94955 611 aa10.31□□□□□ -0.76
CTDSPL2-201ENST00000260327 OATP04181 439 aa10.31□□□□□ -0.76
CTDSPL2-201ENST00000260327 SOX5P35711 763 aa10.31□□□□□ -0.76
CTDSPL2-201ENST00000260327 POU5F1BQ06416 359 aa10.31□□□□□ -0.76
CTDSPL2-201ENST00000260327 DNAL1Q4LDG9 190 aa10.31□□□□□ -0.76
CTDSPL2-201ENST00000260327 SUGP1Q8IWZ8 645 aaKnown RBP10.31□□□□□ -0.76
CTDSPL2-201ENST00000260327 ADGRF4Q8IZF3 695 aa10.31□□□□□ -0.76
CTDSPL2-201ENST00000260327 XXYLT1Q8NBI6 393 aa10.31□□□□□ -0.76
CTDSPL2-201ENST00000260327 ISCUQ9H1K1 167 aa10.31□□□□□ -0.76
CTDSPL2-201ENST00000260327 FAM96AQ9H5X1 160 aa10.31□□□□□ -0.76
CTDSPL2-201ENST00000260327 NGRNQ9NPE2 291 aaKnown RBP10.31□□□□□ -0.76
CTDSPL2-201ENST00000260327 ETAA1Q9NY74 926 aa10.31□□□□□ -0.76
CTDSPL2-201ENST00000260327 IVNS1ABPQ9Y6Y0 642 aa10.31□□□□□ -0.76
CTDSPL2-201ENST00000260327 SPDYE2BA6NHP3 402 aa10.3□□□□□ -0.76
CTDSPL2-201ENST00000260327 ZNF233A6NK53 670 aa10.3□□□□□ -0.76
CTDSPL2-201ENST00000260327 SPDYE6P0CI01 402 aa10.3□□□□□ -0.76
CTDSPL2-201ENST00000260327 VAMP7P51809 220 aa10.3□□□□□ -0.76
CTDSPL2-201ENST00000260327 CAPRIN1Q14444 709 aaKnown RBP10.3□□□□□ -0.76
CTDSPL2-201ENST00000260327 KYNUQ16719 465 aa10.3□□□□□ -0.76
CTDSPL2-201ENST00000260327 TMEM270Q6UE05 265 aa10.3□□□□□ -0.76
CTDSPL2-201ENST00000260327 ZNF408Q9H9D4 720 aa10.3□□□□□ -0.76
CTDSPL2-201ENST00000260327 PI4KBQ9UBF8 816 aa10.3□□□□□ -0.76
CTDSPL2-201ENST00000260327 AIM2O14862 343 aa10.3□□□□□ -0.76
CTDSPL2-201ENST00000260327 CLDN3O15551 220 aa10.3□□□□□ -0.76
CTDSPL2-201ENST00000260327 TPP2P29144 1249 aaPredicted RBP10.3□□□□□ -0.76
CTDSPL2-201ENST00000260327 DMPKQ09013 629 aa10.3□□□□□ -0.76
CTDSPL2-201ENST00000260327 NCAPG2Q86XI2 1143 aa10.3□□□□□ -0.76
CTDSPL2-201ENST00000260327 CCSER1Q9C0I3 900 aa10.3□□□□□ -0.76
CTDSPL2-201ENST00000260327 WNT8AQ9H1J5 351 aa10.3□□□□□ -0.76
CTDSPL2-201ENST00000260327 EPB41L4AQ9HCS5 686 aaPredicted RBP10.3□□□□□ -0.76
CTDSPL2-201ENST00000260327 ARAP3Q8WWN8 1544 aa10.3□□□□□ -0.76
CTDSPL2-201ENST00000260327 LRRIQ1Q96JM4 1722 aa10.3□□□□□ -0.76
CTDSPL2-201ENST00000260327 MYMKA6NI61 221 aa10.3□□□□□ -0.76
CTDSPL2-201ENST00000260327 VCPP55072 806 aaKnown RBP10.3□□□□□ -0.76
CTDSPL2-201ENST00000260327 TRIM60Q495X7 471 aa10.3□□□□□ -0.76
CTDSPL2-201ENST00000260327 KLC3Q6P597 504 aa10.3□□□□□ -0.76
CTDSPL2-201ENST00000260327 LVRNQ6Q4G3 990 aa10.3□□□□□ -0.76
CTDSPL2-201ENST00000260327 PRPF39Q86UA1 669 aaKnown RBP10.3□□□□□ -0.76
CTDSPL2-201ENST00000260327 CLMNQ96JQ2 1002 aa10.3□□□□□ -0.76
CTDSPL2-201ENST00000260327 MTA3Q9BTC8 594 aa10.3□□□□□ -0.76
CTDSPL2-201ENST00000260327 ZNF446Q9NWS9 450 aa10.3□□□□□ -0.76
CTDSPL2-201ENST00000260327 MCM8Q9UJA3 840 aa10.3□□□□□ -0.76
CTDSPL2-201ENST00000260327 ATP9AO75110 1047 aa10.3□□□□□ -0.76
CTDSPL2-201ENST00000260327 WBP4O75554 376 aaKnown RBP10.3□□□□□ -0.76
CTDSPL2-201ENST00000260327 DGKIO75912 1065 aa10.3□□□□□ -0.76
CTDSPL2-201ENST00000260327 GALCP54803 685 aa10.3□□□□□ -0.76
CTDSPL2-201ENST00000260327 PTPAQ15257 358 aa10.3□□□□□ -0.76
CTDSPL2-201ENST00000260327 P3H1Q32P28 736 aa10.3□□□□□ -0.76
CTDSPL2-201ENST00000260327 TRAF7Q6Q0C0 670 aa10.3□□□□□ -0.76
CTDSPL2-201ENST00000260327 FAM196AQ6ZSG2 479 aa10.3□□□□□ -0.76
CTDSPL2-201ENST00000260327 EPS8L3Q8TE67 593 aaKnown RBP10.3□□□□□ -0.76
CTDSPL2-201ENST00000260327 PLEKHG2Q9H7P9 1386 aa10.3□□□□□ -0.76
CTDSPL2-201ENST00000260327 LOC100653049A0A140TA62 436 aa10.3□□□□□ -0.76
CTDSPL2-201ENST00000260327 PHF2O75151 1096 aa10.3□□□□□ -0.76
CTDSPL2-201ENST00000260327 SERPINI2O75830 405 aa10.3□□□□□ -0.76
CTDSPL2-201ENST00000260327 KRT34O76011 436 aa10.3□□□□□ -0.76
CTDSPL2-201ENST00000260327 UBOX5O94941 541 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms