RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 ZBTB45Q96K62 511 aaPredicted RBP18.34■□□□□ 0.53
SDCBP-201ENST00000260130 C11orf84Q9BUA3 381 aaPredicted RBP18.34■□□□□ 0.53
SDCBP-201ENST00000260130 STRA6Q9BX79 667 aa18.34■□□□□ 0.53
SDCBP-201ENST00000260130 FNDC1Q4ZHG4 1894 aaPredicted RBP18.34■□□□□ 0.53
SDCBP-201ENST00000260130 ABLIM1O14639 778 aa18.34■□□□□ 0.53
SDCBP-201ENST00000260130 INPPL1O15357 1258 aa18.34■□□□□ 0.53
SDCBP-201ENST00000260130 PPP1R37O75864 691 aa18.34■□□□□ 0.53
SDCBP-201ENST00000260130 ZNF202O95125 648 aa18.34■□□□□ 0.53
SDCBP-201ENST00000260130 PIGRP01833 764 aa18.34■□□□□ 0.53
SDCBP-201ENST00000260130 MCF2P10911 925 aa18.34■□□□□ 0.53
SDCBP-201ENST00000260130 IGFBP4P22692 258 aa18.34■□□□□ 0.53
SDCBP-201ENST00000260130 MLH1P40692 756 aa18.34■□□□□ 0.53
SDCBP-201ENST00000260130 LIG4P49917 911 aa18.34■□□□□ 0.53
SDCBP-201ENST00000260130 RNASELQ05823 741 aaKnown RBP18.34■□□□□ 0.53
SDCBP-201ENST00000260130 P2RX5Q93086 422 aa18.34■□□□□ 0.53
SDCBP-201ENST00000260130 STXBP5LQ9Y2K9 1186 aa18.34■□□□□ 0.53
SDCBP-201ENST00000260130 PCDHB13Q9Y5F0 798 aa18.34■□□□□ 0.53
SDCBP-201ENST00000260130 HNRNPDLO14979 420 aaKnown RBP18.33■□□□□ 0.52
SDCBP-201ENST00000260130 CLDN3O15551 220 aa18.33■□□□□ 0.52
SDCBP-201ENST00000260130 GCNT3O95395 438 aa18.33■□□□□ 0.52
SDCBP-201ENST00000260130 POMCP01189 267 aa18.33■□□□□ 0.52
SDCBP-201ENST00000260130 UNC13DQ70J99 1090 aa18.33■□□□□ 0.52
SDCBP-201ENST00000260130 COLGALT1Q8NBJ5 622 aa18.33■□□□□ 0.52
SDCBP-201ENST00000260130 HVCN1Q96D96 273 aa18.33■□□□□ 0.52
SDCBP-201ENST00000260130 ZFP42Q96MM3 310 aa18.33■□□□□ 0.52
SDCBP-201ENST00000260130 KLK14Q9P0G3 267 aa18.33■□□□□ 0.52
SDCBP-201ENST00000260130 ANKFY1Q9P2R3 1169 aa18.33■□□□□ 0.52
SDCBP-201ENST00000260130 GDAQ9Y2T3 454 aa18.33■□□□□ 0.52
SDCBP-201ENST00000260130 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.33■□□□□ 0.524e-6■□□□□ 10.9
SDCBP-201ENST00000260130 PVALEFA0A1B0GWK0 134 aa18.32■□□□□ 0.52
SDCBP-201ENST00000260130 POU3F3P20264 500 aaPredicted RBP18.32■□□□□ 0.52
SDCBP-201ENST00000260130 ALCAMQ13740 583 aa18.32■□□□□ 0.52
SDCBP-201ENST00000260130 KCNT2Q6UVM3 1135 aa18.32■□□□□ 0.52
SDCBP-201ENST00000260130 KRBA2Q6ZNG9 492 aa18.32■□□□□ 0.52
SDCBP-201ENST00000260130 KLHL23Q8NBE8 558 aa18.32■□□□□ 0.52
SDCBP-201ENST00000260130 MIOSQ9NXC5 875 aa18.32■□□□□ 0.52
SDCBP-201ENST00000260130 RECQL4O94761 1208 aa18.32■□□□□ 0.52
SDCBP-201ENST00000260130 MYL1P05976 194 aa18.32■□□□□ 0.52
SDCBP-201ENST00000260130 GRM5P41594 1212 aa18.32■□□□□ 0.52
SDCBP-201ENST00000260130 MATR3P43243 847 aaKnown RBP eCLIP18.32■□□□□ 0.52
SDCBP-201ENST00000260130 CASP5P51878 434 aa18.32■□□□□ 0.52
SDCBP-201ENST00000260130 MCL1Q07820 350 aa18.32■□□□□ 0.52
SDCBP-201ENST00000260130 SASS6Q6UVJ0 657 aa18.32■□□□□ 0.52
SDCBP-201ENST00000260130 ZNF280BQ86YH2 543 aa18.32■□□□□ 0.52
SDCBP-201ENST00000260130 GSTCDQ8NEC7 633 aa18.32■□□□□ 0.52
SDCBP-201ENST00000260130 ZNF558Q96NG5 402 aa18.32■□□□□ 0.52
SDCBP-201ENST00000260130 FGFBP2Q9BYJ0 223 aa18.32■□□□□ 0.52
SDCBP-201ENST00000260130 NRDE2Q9H7Z3 1164 aa18.32■□□□□ 0.52
SDCBP-201ENST00000260130 PLAGL2Q9UPG8 496 aa18.32■□□□□ 0.52
SDCBP-201ENST00000260130 ZMYM2Q9UBW7 1377 aa18.32■□□□□ 0.52
SDCBP-201ENST00000260130 GTPBP6O43824 516 aaPredicted RBP18.31■□□□□ 0.52
SDCBP-201ENST00000260130 MYBP10242 640 aa18.31■□□□□ 0.52
SDCBP-201ENST00000260130 HARSP12081 509 aaKnown RBP18.31■□□□□ 0.52
SDCBP-201ENST00000260130 ALDH7A1P49419 539 aaKnown RBP18.31■□□□□ 0.52
SDCBP-201ENST00000260130 SCNN1GP51170 649 aa18.31■□□□□ 0.52
SDCBP-201ENST00000260130 NOLC1Q14978 699 aaKnown RBP eCLIP18.31■□□□□ 0.52
SDCBP-201ENST00000260130 THNSL1Q8IYQ7 743 aa18.31■□□□□ 0.52
SDCBP-201ENST00000260130 FMR1NBQ8N0W7 255 aaPredicted RBP18.31■□□□□ 0.52
SDCBP-201ENST00000260130 CEP120Q8N960 986 aa18.31■□□□□ 0.52
SDCBP-201ENST00000260130 HPS3Q969F9 1004 aa18.31■□□□□ 0.52
SDCBP-201ENST00000260130 FAM193BQ96PV7 902 aaPredicted RBP18.31■□□□□ 0.52
SDCBP-201ENST00000260130 CCDC94Q9BW85 323 aaPredicted RBP18.31■□□□□ 0.52
SDCBP-201ENST00000260130 GBP3Q9H0R5 595 aa18.31■□□□□ 0.52
SDCBP-201ENST00000260130 LMCD1Q9NZU5 365 aa18.31■□□□□ 0.52
SDCBP-201ENST00000260130 ZC3H11AO75152 810 aaKnown RBP eCLIP18.31■□□□□ 0.52
SDCBP-201ENST00000260130 DDHD2O94830 711 aa18.31■□□□□ 0.52
SDCBP-201ENST00000260130 ITGB1P05556 798 aa18.31■□□□□ 0.52
SDCBP-201ENST00000260130 PBX3P40426 434 aa18.31■□□□□ 0.52
SDCBP-201ENST00000260130 BCAR1P56945 870 aa18.31■□□□□ 0.52
SDCBP-201ENST00000260130 OSTNP61366 133 aa18.31■□□□□ 0.52
SDCBP-201ENST00000260130 KCNA1Q09470 495 aa18.31■□□□□ 0.52
SDCBP-201ENST00000260130 ACCSQ96QU6 501 aa18.31■□□□□ 0.52
SDCBP-201ENST00000260130 RPS6KC1Q96S38 1066 aa18.31■□□□□ 0.52
SDCBP-201ENST00000260130 HAPLN2Q9GZV7 340 aa18.31■□□□□ 0.52
SDCBP-201ENST00000260130 ALG13Q9NP73 1137 aaKnown RBP18.31■□□□□ 0.52
SDCBP-201ENST00000260130 EXOC7Q9UPT5 735 aa18.31■□□□□ 0.52
SDCBP-201ENST00000260130 MTCH2Q9Y6C9 303 aa18.31■□□□□ 0.52
SDCBP-201ENST00000260130 UQCRHLA0A096LP55 91 aa18.3■□□□□ 0.52
SDCBP-201ENST00000260130 GRM6O15303 877 aa18.3■□□□□ 0.52
SDCBP-201ENST00000260130 ADCY5O95622 1261 aa18.3■□□□□ 0.52
SDCBP-201ENST00000260130 UQCRHP07919 91 aa18.3■□□□□ 0.52
SDCBP-201ENST00000260130 EHHADHQ08426 723 aa18.3■□□□□ 0.52
SDCBP-201ENST00000260130 SNW1Q13573 536 aaKnown RBP18.3■□□□□ 0.52
SDCBP-201ENST00000260130 FAM26FQ5R3K3 315 aa18.3■□□□□ 0.52
SDCBP-201ENST00000260130 SLC39A4Q6P5W5 647 aa18.3■□□□□ 0.52
SDCBP-201ENST00000260130 STXBP4Q6ZWJ1 553 aa18.3■□□□□ 0.52
SDCBP-201ENST00000260130 ENGASEQ8NFI3 743 aa18.3■□□□□ 0.52
SDCBP-201ENST00000260130 ACAP3Q96P50 834 aa18.3■□□□□ 0.52
SDCBP-201ENST00000260130 DNAJB4Q9UDY4 337 aa18.3■□□□□ 0.52
SDCBP-201ENST00000260130 MYO9BQ13459 2157 aa18.3■□□□□ 0.52
SDCBP-201ENST00000260130 RALGAPA2Q2PPJ7 1873 aa18.3■□□□□ 0.52
SDCBP-201ENST00000260130 CARNS1A5YM72 827 aa18.3■□□□□ 0.52
SDCBP-201ENST00000260130 ANKRD63C9JTQ0 380 aa18.3■□□□□ 0.52
SDCBP-201ENST00000260130 FGF18O76093 207 aa18.3■□□□□ 0.52
SDCBP-201ENST00000260130 PPM1AP35813 382 aa18.3■□□□□ 0.52
SDCBP-201ENST00000260130 YARSP54577 528 aaKnown RBP18.3■□□□□ 0.52
SDCBP-201ENST00000260130 FAM160A1Q05DH4 1040 aa18.3■□□□□ 0.52
SDCBP-201ENST00000260130 KANK3Q6NY19 840 aa18.3■□□□□ 0.52
SDCBP-201ENST00000260130 SPPL3Q8TCT6 385 aa18.3■□□□□ 0.52
SDCBP-201ENST00000260130 CCDC34Q96HJ3 373 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms