RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 INTS4Q96HW7 963 aaKnown RBP8.23□□□□□ -1.09
GPNMB-201ENST00000258733 PLIN2Q99541 437 aa8.23□□□□□ -1.09
GPNMB-201ENST00000258733 NEURL2Q9BR09 285 aa8.23□□□□□ -1.09
GPNMB-201ENST00000258733 CCDC106Q9BWC9 280 aa8.23□□□□□ -1.09
GPNMB-201ENST00000258733 RUBCNLQ9H714 662 aa8.23□□□□□ -1.09
GPNMB-201ENST00000258733 C9orf78Q9NZ63 289 aaPredicted RBP8.23□□□□□ -1.09
GPNMB-201ENST00000258733 IL37Q9NZH6 218 aa8.23□□□□□ -1.09
GPNMB-201ENST00000258733 ASIC3Q9UHC3 531 aa8.23□□□□□ -1.09
GPNMB-201ENST00000258733 STX8Q9UNK0 236 aa8.23□□□□□ -1.09
GPNMB-201ENST00000258733 SNX8Q9Y5X2 465 aa8.23□□□□□ -1.09
GPNMB-201ENST00000258733 VWDEQ8N2E2 1590 aa8.23□□□□□ -1.09
GPNMB-201ENST00000258733 MYH13Q9UKX3 1938 aa8.23□□□□□ -1.09
GPNMB-201ENST00000258733 CTAGE15A4D2H0 777 aa8.23□□□□□ -1.09
GPNMB-201ENST00000258733 GOLGA8RI6L899 631 aa8.23□□□□□ -1.09
GPNMB-201ENST00000258733 TLR3O15455 904 aaKnown RBP8.23□□□□□ -1.09
GPNMB-201ENST00000258733 CTAGE8P0CG41 777 aa8.23□□□□□ -1.09
GPNMB-201ENST00000258733 CD86P42081 329 aa8.23□□□□□ -1.09
GPNMB-201ENST00000258733 KRT76Q01546 638 aa8.23□□□□□ -1.09
GPNMB-201ENST00000258733 ROR1Q01973 937 aa8.23□□□□□ -1.09
GPNMB-201ENST00000258733 ENPEPQ07075 957 aa8.23□□□□□ -1.09
GPNMB-201ENST00000258733 DNAJC3Q13217 504 aa8.23□□□□□ -1.09
GPNMB-201ENST00000258733 NFE2Q16621 373 aaPredicted RBP8.23□□□□□ -1.09
GPNMB-201ENST00000258733 METTL24Q5JXM2 366 aa8.23□□□□□ -1.09
GPNMB-201ENST00000258733 CRTC1Q6UUV9 634 aa8.23□□□□□ -1.09
GPNMB-201ENST00000258733 CTAGE6Q86UF2 777 aa8.23□□□□□ -1.09
GPNMB-201ENST00000258733 CTAGE4Q8IX94 777 aa8.23□□□□□ -1.09
GPNMB-201ENST00000258733 FMR1NBQ8N0W7 255 aaPredicted RBP8.23□□□□□ -1.09
GPNMB-201ENST00000258733 USHBP1Q8N6Y0 703 aa8.23□□□□□ -1.09
GPNMB-201ENST00000258733 PLEKHO2Q8TD55 490 aa8.23□□□□□ -1.09
GPNMB-201ENST00000258733 ZNF606Q8WXB4 792 aa8.23□□□□□ -1.09
GPNMB-201ENST00000258733 NMD3Q96D46 503 aaKnown RBP8.23□□□□□ -1.09
GPNMB-201ENST00000258733 ARL5BQ96KC2 179 aa8.23□□□□□ -1.09
GPNMB-201ENST00000258733 CEP19Q96LK0 163 aa8.23□□□□□ -1.09
GPNMB-201ENST00000258733 ZSCAN31Q96LW9 406 aaPredicted RBP8.23□□□□□ -1.09
GPNMB-201ENST00000258733 NOX5Q96PH1 765 aa8.23□□□□□ -1.09
GPNMB-201ENST00000258733 VPS16Q9H269 839 aa8.23□□□□□ -1.09
GPNMB-201ENST00000258733 DENND2DQ9H6A0 471 aaPredicted RBP8.23□□□□□ -1.09
GPNMB-201ENST00000258733 CYP4F11Q9HBI6 524 aa8.23□□□□□ -1.09
GPNMB-201ENST00000258733 TBC1D22BQ9NU19 505 aa8.23□□□□□ -1.09
GPNMB-201ENST00000258733 PRKAG2Q9UGJ0 569 aa8.23□□□□□ -1.09
GPNMB-201ENST00000258733 PCOLCE2Q9UKZ9 415 aa8.23□□□□□ -1.09
GPNMB-201ENST00000258733 RPH3AQ9Y2J0 694 aaPredicted RBP8.23□□□□□ -1.09
GPNMB-201ENST00000258733 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.22□□□□□ -1.09
GPNMB-201ENST00000258733 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.22□□□□□ -1.09
GPNMB-201ENST00000258733 SH3PXD2BA1X283 911 aa8.22□□□□□ -1.09
GPNMB-201ENST00000258733 FADS2P1A8MWK0 482 aa8.22□□□□□ -1.09
GPNMB-201ENST00000258733 XPO1O14980 1071 aaKnown RBP8.22□□□□□ -1.09
GPNMB-201ENST00000258733 ZBTB39O15060 712 aa8.22□□□□□ -1.09
GPNMB-201ENST00000258733 STX10O60499 249 aa8.22□□□□□ -1.09
GPNMB-201ENST00000258733 PFKFB2O60825 505 aa8.22□□□□□ -1.09
GPNMB-201ENST00000258733 WFS1O76024 890 aa8.22□□□□□ -1.09
GPNMB-201ENST00000258733 AGR2O95994 175 aa8.22□□□□□ -1.09
GPNMB-201ENST00000258733 KRT6AP02538 564 aa8.22□□□□□ -1.09
GPNMB-201ENST00000258733 KRT6BP04259 564 aa8.22□□□□□ -1.09
GPNMB-201ENST00000258733 HEXBP07686 556 aa8.22□□□□□ -1.09
GPNMB-201ENST00000258733 GSTM1P09488 218 aa8.22□□□□□ -1.09
GPNMB-201ENST00000258733 MDH1P40925 334 aaKnown RBP8.22□□□□□ -1.09
GPNMB-201ENST00000258733 RAD23BP54727 409 aa8.22□□□□□ -1.09
GPNMB-201ENST00000258733 SSTP61278 116 aa8.22□□□□□ -1.09
GPNMB-201ENST00000258733 VBP1P61758 197 aa8.22□□□□□ -1.09
GPNMB-201ENST00000258733 SMU1Q2TAY7 513 aa8.22□□□□□ -1.09
GPNMB-201ENST00000258733 PPP6R3Q5H9R7 873 aaPredicted RBP8.22□□□□□ -1.09
GPNMB-201ENST00000258733 FERMT3Q86UX7 667 aa8.22□□□□□ -1.09
GPNMB-201ENST00000258733 CROCCP3Q8IVE0 287 aa8.22□□□□□ -1.09
GPNMB-201ENST00000258733 LRRC34Q8IZ02 419 aa8.22□□□□□ -1.09
GPNMB-201ENST00000258733 RIBC1Q8N443 379 aaPredicted RBP8.22□□□□□ -1.09
GPNMB-201ENST00000258733 CPSF7Q8N684 471 aaKnown RBP8.22□□□□□ -1.09
GPNMB-201ENST00000258733 OR6C4Q8NGE1 309 aa8.22□□□□□ -1.09
GPNMB-201ENST00000258733 OR10Z1Q8NGY1 313 aa8.22□□□□□ -1.09
GPNMB-201ENST00000258733 USB1Q9BQ65 265 aaKnown RBP8.22□□□□□ -1.09
GPNMB-201ENST00000258733 BTBD2Q9BX70 525 aa8.22□□□□□ -1.09
GPNMB-201ENST00000258733 RNF38Q9H0F5 515 aa8.22□□□□□ -1.09
GPNMB-201ENST00000258733 TRPM5Q9NZQ8 1165 aa8.22□□□□□ -1.09
GPNMB-201ENST00000258733 IFT172Q9UG01 1749 aa8.22□□□□□ -1.09
GPNMB-201ENST00000258733 MYOM1P52179 1685 aa8.22□□□□□ -1.09
GPNMB-201ENST00000258733 ABCA9Q8IUA7 1624 aa8.22□□□□□ -1.09
GPNMB-201ENST00000258733 ANO9A1A5B4 782 aa8.22□□□□□ -1.09
GPNMB-201ENST00000258733 CCT8L1PA6NM43 557 aa8.22□□□□□ -1.09
GPNMB-201ENST00000258733 RECKO95980 971 aa8.22□□□□□ -1.09
GPNMB-201ENST00000258733 CAPN1P07384 714 aa8.22□□□□□ -1.09
GPNMB-201ENST00000258733 MYZAPP0CAP1 466 aa8.22□□□□□ -1.09
GPNMB-201ENST00000258733 PRKAR2AP13861 404 aaKnown RBP8.22□□□□□ -1.09
GPNMB-201ENST00000258733 SELLP14151 372 aa8.22□□□□□ -1.09
GPNMB-201ENST00000258733 ASMTP46597 345 aa8.22□□□□□ -1.09
GPNMB-201ENST00000258733 PEX3P56589 373 aa8.22□□□□□ -1.09
GPNMB-201ENST00000258733 TAGLNQ01995 201 aaKnown RBP8.22□□□□□ -1.09
GPNMB-201ENST00000258733 C2orf54Q08AI8 447 aa8.22□□□□□ -1.09
GPNMB-201ENST00000258733 CUL4AQ13619 759 aa8.22□□□□□ -1.09
GPNMB-201ENST00000258733 RCN2Q14257 317 aa8.22□□□□□ -1.09
GPNMB-201ENST00000258733 CWF19L2Q2TBE0 894 aaKnown RBP8.22□□□□□ -1.09
GPNMB-201ENST00000258733 TTMPQ5BVD1 217 aa8.22□□□□□ -1.09
GPNMB-201ENST00000258733 FYB2Q5VWT5 728 aa8.22□□□□□ -1.09
GPNMB-201ENST00000258733 ANO1Q5XXA6 986 aa8.22□□□□□ -1.09
GPNMB-201ENST00000258733 OLFM4Q6UX06 510 aa8.22□□□□□ -1.09
GPNMB-201ENST00000258733 ANGPTL8Q6UXH0 198 aa8.22□□□□□ -1.09
GPNMB-201ENST00000258733 NME9Q86XW9 330 aa8.22□□□□□ -1.09
GPNMB-201ENST00000258733 TICAM1Q8IUC6 712 aa8.22□□□□□ -1.09
GPNMB-201ENST00000258733 MMAAQ8IVH4 418 aaKnown RBP8.22□□□□□ -1.09
GPNMB-201ENST00000258733 ST13P4Q8IZP2 240 aaPredicted RBP8.22□□□□□ -1.09
GPNMB-201ENST00000258733 FBXL16Q8N461 479 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms