RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 HOXD13P35453 343 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 ACOT2P49753 483 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 ERFP50548 548 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 POLGP54098 1239 aaPredicted RBP5.06□□□□□ -1.6
USP44-201ENST00000258499 MXRA7P84157 204 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 TRPC3Q13507 836 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 HYIQ5T013 277 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 SYCP2LQ5T4T6 812 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 IZUMO3Q5VZ72 239 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 SCARA5Q6ZMJ2 495 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 EPM2AIP1Q7L775 607 aaPredicted RBP5.06□□□□□ -1.6
USP44-201ENST00000258499 SUGP1Q8IWZ8 645 aaKnown RBP5.06□□□□□ -1.6
USP44-201ENST00000258499 C4orf33Q8N1A6 199 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 ANKRD35Q8N283 1001 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 TATDN2Q93075 761 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 ACSF2Q96CM8 615 aaPredicted RBP5.06□□□□□ -1.6
USP44-201ENST00000258499 ZNF668Q96K58 619 aaPredicted RBP5.06□□□□□ -1.6
USP44-201ENST00000258499 SMC6Q96SB8 1091 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 FAM167BQ9BTA0 163 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 OSBPL7Q9BZF2 842 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 DNAJC18Q9H819 358 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 ALG13Q9NP73 1137 aaKnown RBP5.06□□□□□ -1.6
USP44-201ENST00000258499 FAM198AQ9UFP1 575 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 DCTN4Q9UJW0 460 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 TPX2Q9ULW0 747 aaKnown RBP5.06□□□□□ -1.6
USP44-201ENST00000258499 COG5Q9UP83 839 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 L3MBTL1Q9Y468 752 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 USP15Q9Y4E8 981 aaPredicted RBP5.06□□□□□ -1.6
USP44-201ENST00000258499 ZHX2Q9Y6X8 837 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 MYH13Q9UKX3 1938 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 DNM1LO00429 736 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 NFIBO00712 420 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 CES2O00748 559 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 KIAA0391O15091 583 aaKnown RBP5.06□□□□□ -1.6
USP44-201ENST00000258499 EDIL3O43854 480 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 ZBED4O75132 1171 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 RALAP11233 206 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 CYP11B1P15538 503 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 POLD1P28340 1107 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 CNGA1P29973 690 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 OSTNP61366 133 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 DRP2Q13474 957 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 KCNV1Q6PIU1 500 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 SPATA21Q7Z572 469 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 NOP9Q86U38 636 aaKnown RBP5.06□□□□□ -1.6
USP44-201ENST00000258499 MCF2L2Q86YR7 1114 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 SUPT20HQ8NEM7 779 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 PPP1R14CQ8TAE6 165 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 ZDHHC15Q96MV8 337 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 TMEM39BQ9GZU3 492 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 NOD2Q9HC29 1040 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 SLC24A3Q9HC58 644 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 SIX2Q9NPC8 291 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 ABCF3Q9NUQ8 709 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 GABBR1Q9UBS5 961 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 MYH15Q9Y2K3 1946 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 CYP3A7-CYP3A51PA0A087WV96 503 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 GOLGA8RI6L899 631 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 IGF2BP3O00425 579 aaKnown RBP eCLIP5.06□□□□□ -1.6
USP44-201ENST00000258499 TLR3O15455 904 aaKnown RBP5.06□□□□□ -1.6
USP44-201ENST00000258499 RIPK2O43353 540 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 DIAPH2O60879 1101 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 RARGP13631 454 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 PLS3P13797 630 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 RRM1P23921 792 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 CYP3A7P24462 503 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 ELF1P32519 619 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 GCKP35557 465 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 GPS1Q13098 491 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 BBS9Q3SYG4 887 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 STRIP1Q5VSL9 837 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 FYB2Q5VWT5 728 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 DUPD1Q68J44 220 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 LLGL2Q6P1M3 1020 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 PRUNE1Q86TP1 453 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 PALM2Q8IXS6 379 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.06□□□□□ -1.6
USP44-201ENST00000258499 RSAD2Q8WXG1 361 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 SLC5A5Q92911 643 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 ZKSCAN4Q969J2 545 aaPredicted RBP5.06□□□□□ -1.6
USP44-201ENST00000258499 MCUR1Q96AQ8 359 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 SNF8Q96H20 258 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 GJD4Q96KN9 370 aaPredicted RBP5.06□□□□□ -1.6
USP44-201ENST00000258499 P2RX7Q99572 595 aaKnown RBP5.06□□□□□ -1.6
USP44-201ENST00000258499 HSD17B14Q9BPX1 270 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 QTRT2Q9H974 415 aaKnown RBP5.06□□□□□ -1.6
USP44-201ENST00000258499 CHST7Q9NS84 486 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 NXF1Q9UBU9 619 aaKnown RBP5.06□□□□□ -1.6
USP44-201ENST00000258499 VAV3Q9UKW4 847 aa5.06□□□□□ -1.6
USP44-201ENST00000258499 PKD1L3Q7Z443 1732 aa5.05□□□□□ -1.6
USP44-201ENST00000258499 WDR64B1ANS9 1081 aa5.05□□□□□ -1.6
USP44-201ENST00000258499 PPFIA2O75334 1257 aa5.05□□□□□ -1.6
USP44-201ENST00000258499 GJB6O95452 261 aa5.05□□□□□ -1.6
USP44-201ENST00000258499 CPP00450 1065 aa5.05□□□□□ -1.6
USP44-201ENST00000258499 KRT10P13645 584 aa5.05□□□□□ -1.6
USP44-201ENST00000258499 DRD4P21917 467 aa5.05□□□□□ -1.6
USP44-201ENST00000258499 RFX1P22670 979 aa5.05□□□□□ -1.6
USP44-201ENST00000258499 DNAJC3Q13217 504 aa5.05□□□□□ -1.6
USP44-201ENST00000258499 SEZ6Q53EL9 994 aa5.05□□□□□ -1.6
USP44-201ENST00000258499 SWSAP1Q6NVH7 229 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms