RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 ADSLP30566 484 aaPredicted RBP7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 ADCY8P40145 1251 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 HSPA13P48723 471 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 GPC3P51654 580 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 APLP1P51693 650 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 C2orf54Q08AI8 447 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 TMEM214Q6NUQ4 689 aaKnown RBP7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 LRIG3Q6UXM1 1119 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 PTPRN2Q92932 1015 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 C8orf37Q96NL8 207 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 HERC2P3Q9BVR0 1158 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 DNAJC5Q9H3Z4 198 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 CYLDQ9NQC7 956 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 HMG20BQ9P0W2 317 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 KDRP35968 1356 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 H0Y626 953 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 GNPATO15228 680 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 YKT6O15498 198 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 CCDC22O60826 627 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 KRT19P08727 400 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 ETS2P15036 469 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 GNA13Q14344 377 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 OASLQ15646 514 aaKnown RBP7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 C5orf22Q49AR2 442 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 DEPDC1Q5TB30 811 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 TRIM22Q8IYM9 498 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 BRSK1Q8TDC3 778 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 NAT14Q8WUY8 206 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 ASB12Q8WXK4 309 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 RSL24D1Q9UHA3 163 aaKnown RBP7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 AOX1Q06278 1338 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 H3BRJ5 948 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 OXSR1O95747 527 aaPredicted RBP7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 POLR3DP05423 398 aaPredicted RBP7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 EEF1GP26641 437 aaKnown RBP7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 KRT9P35527 623 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 RPL5P46777 297 aaKnown RBP7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 PDE4DQ08499 809 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 SPDYAQ5MJ70 313 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 C4orf22Q6V702 233 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 RNF135Q8IUD6 432 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 TRIM59Q8IWR1 403 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 PNPT1Q8TCS8 783 aaKnown RBP7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 GPATCH1Q9BRR8 931 aaKnown RBP7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 METTL22Q9BUU2 404 aaPredicted RBP7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 CCDC134Q9H6E4 229 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 PHAXQ9H814 394 aaKnown RBP7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 LGR6Q9HBX8 967 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 PCDH12Q9NPG4 1184 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 SIK3Q9Y2K2 1263 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 TDRKHQ9Y2W6 561 aaKnown RBP7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 USP31Q70CQ4 1352 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 PIK3CDO00329 1044 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 GABBR2O75899 941 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 PDE9AO76083 593 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 C6orf222P0C671 652 aaPredicted RBP7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 SERPINH1P50454 418 aaKnown RBP7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 BPIFB4P59827 614 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 NIPAL4Q0D2K0 466 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 ZNF662Q6ZS27 426 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 MAEAQ7L5Y9 396 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 EXOC3L1Q86VI1 746 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 SFR1Q86XK3 245 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 C12orf50Q8NA57 414 aaPredicted RBP7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 MED30Q96HR3 178 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 APOL5Q9BWW9 433 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 NYXQ9GZU5 481 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 ALDH8A1Q9H2A2 487 aaPredicted RBP7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 EBF2Q9HAK2 575 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 METTL5Q9NRN9 209 aaKnown RBP7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 IARS2Q9NSE4 1012 aaKnown RBP7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 CLIC5Q9NZA1 410 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 UNCXA6NJT0 531 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 PI4K2BG5E9Z4 385 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 WFS1O76024 890 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 MYCP01106 439 aaPredicted RBP7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 GSSP48637 474 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 GDI2P50395 445 aaKnown RBP7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 KLHL12Q53G59 568 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 SNAP47Q5SQN1 464 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 CCNI2Q6ZMN8 369 aaPredicted RBP7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 C14orf80Q86SX3 495 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 TRIM69Q86WT6 500 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 ANKRD35Q8N283 1001 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 PI4K2BQ8TCG2 481 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 CLIC6Q96NY7 704 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 JMJD4Q9H9V9 463 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 SLC12A4Q9UP95 1085 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 GIT1Q9Y2X7 761 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 MROH2AA6NES4 1674 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 NMT2O60551 498 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 TOM1L1O75674 476 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 MAP3K6O95382 1288 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 PHKG2P15735 406 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 PLCG1P19174 1290 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 C4BPBP20851 252 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 CNPY1Q3B7I2 92 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 LDHAL6AQ6ZMR3 332 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 VPS39Q96JC1 886 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 ZNF184Q99676 751 aaPredicted RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms