RNA–Protein interactions for RNA: ENST00000249440.4

HOXD3-201, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD3, Length 2,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-201ENST00000249440 PGAP2Q9UHJ9 254 aa17.63■□□□□ 0.41
HOXD3-201ENST00000249440 CNOT7Q9UIV1 285 aaKnown RBP17.63■□□□□ 0.41
HOXD3-201ENST00000249440 ANKRD63C9JTQ0 380 aa17.63■□□□□ 0.41
HOXD3-201ENST00000249440 CAND2O75155 1236 aa17.63■□□□□ 0.41
HOXD3-201ENST00000249440 FSBPO95073 299 aa17.63■□□□□ 0.41
HOXD3-201ENST00000249440 RPL21P46778 160 aaKnown RBP17.63■□□□□ 0.41
HOXD3-201ENST00000249440 CYP1B1Q16678 543 aa17.63■□□□□ 0.41
HOXD3-201ENST00000249440 TTC27Q6P3X3 843 aa17.63■□□□□ 0.41
HOXD3-201ENST00000249440 SLC13A5Q86YT5 568 aaPredicted RBP17.63■□□□□ 0.41
HOXD3-201ENST00000249440 CCDC105Q8IYK2 499 aa17.63■□□□□ 0.41
HOXD3-201ENST00000249440 ZDHHC14Q8IZN3 488 aa17.63■□□□□ 0.41
HOXD3-201ENST00000249440 FBXL13Q8NEE6 735 aa17.63■□□□□ 0.41
HOXD3-201ENST00000249440 AGBL3Q8NEM8 1001 aa17.63■□□□□ 0.41
HOXD3-201ENST00000249440 HELQQ8TDG4 1101 aa17.63■□□□□ 0.41
HOXD3-201ENST00000249440 RAPGEF5Q92565 580 aa17.63■□□□□ 0.41
HOXD3-201ENST00000249440 ZNF653Q96CK0 615 aa17.63■□□□□ 0.41
HOXD3-201ENST00000249440 SAAL1Q96ER3 474 aa17.63■□□□□ 0.41
HOXD3-201ENST00000249440 PGM2Q96G03 612 aa17.63■□□□□ 0.41
HOXD3-201ENST00000249440 FHDC1Q9C0D6 1143 aaPredicted RBP17.63■□□□□ 0.41
HOXD3-201ENST00000249440 ACP6Q9NPH0 428 aa17.63■□□□□ 0.41
HOXD3-201ENST00000249440 CAPN7Q9Y6W3 813 aa17.63■□□□□ 0.41
HOXD3-201ENST00000249440 ATP9AO75110 1047 aa17.62■□□□□ 0.41
HOXD3-201ENST00000249440 NPTX2P47972 431 aa17.62■□□□□ 0.41
HOXD3-201ENST00000249440 RWDD2BP57060 319 aa17.62■□□□□ 0.41
HOXD3-201ENST00000249440 IFT88Q13099 833 aa17.62■□□□□ 0.41
HOXD3-201ENST00000249440 TBC1D10BQ4KMP7 808 aaPredicted RBP17.62■□□□□ 0.41
HOXD3-201ENST00000249440 RNF187Q5TA31 235 aaPredicted RBP17.62■□□□□ 0.41
HOXD3-201ENST00000249440 PLA2G4FQ68DD2 849 aa17.62■□□□□ 0.41
HOXD3-201ENST00000249440 C6orf89Q6UWU4 347 aa17.62■□□□□ 0.41
HOXD3-201ENST00000249440 RMDN3Q96TC7 470 aa17.62■□□□□ 0.41
HOXD3-201ENST00000249440 PLVAPQ9BX97 442 aa17.62■□□□□ 0.41
HOXD3-201ENST00000249440 RAB20Q9NX57 234 aa17.62■□□□□ 0.41
HOXD3-201ENST00000249440 ZNFX1Q9P2E3 1918 aaKnown RBP17.62■□□□□ 0.41
HOXD3-201ENST00000249440 DENND3A2RUS2 1198 aa17.61■□□□□ 0.41
HOXD3-201ENST00000249440 H0YHG0 523 aa17.61■□□□□ 0.41
HOXD3-201ENST00000249440 SHBGP04278 402 aa17.61■□□□□ 0.41
HOXD3-201ENST00000249440 GTF2H1P32780 548 aa17.61■□□□□ 0.41
HOXD3-201ENST00000249440 COILP38432 576 aaPredicted RBP17.61■□□□□ 0.41
HOXD3-201ENST00000249440 PPARDQ03181 441 aa17.61■□□□□ 0.41
HOXD3-201ENST00000249440 SLMAPQ14BN4 828 aa17.61■□□□□ 0.41
HOXD3-201ENST00000249440 TMC2Q8TDI7 906 aa17.61■□□□□ 0.41
HOXD3-201ENST00000249440 KAT2BQ92831 832 aa17.61■□□□□ 0.41
HOXD3-201ENST00000249440 CENPTQ96BT3 561 aa17.61■□□□□ 0.41
HOXD3-201ENST00000249440 KIAA1683Q9H0B3 1180 aa17.61■□□□□ 0.41
HOXD3-201ENST00000249440 LRRC4CQ9HCJ2 640 aa17.61■□□□□ 0.41
HOXD3-201ENST00000249440 KMT5AQ9NQR1 393 aa17.61■□□□□ 0.41
HOXD3-201ENST00000249440 PNMA2Q9UL42 364 aa17.61■□□□□ 0.41
HOXD3-201ENST00000249440 CTDP1Q9Y5B0 961 aaPredicted RBP17.61■□□□□ 0.41
HOXD3-201ENST00000249440 CCNE2O96020 404 aa17.61■□□□□ 0.41
HOXD3-201ENST00000249440 FNTAP49354 379 aa17.61■□□□□ 0.41
HOXD3-201ENST00000249440 SLC29A2Q14542 456 aa17.61■□□□□ 0.41
HOXD3-201ENST00000249440 MMS22LQ6ZRQ5 1243 aa17.61■□□□□ 0.41
HOXD3-201ENST00000249440 CYFIP1Q7L576 1253 aa17.61■□□□□ 0.41
HOXD3-201ENST00000249440 RNF25Q96BH1 459 aaPredicted RBP17.61■□□□□ 0.41
HOXD3-201ENST00000249440 BTBD6Q96KE9 485 aa17.61■□□□□ 0.41
HOXD3-201ENST00000249440 POP1Q99575 1024 aaKnown RBP17.61■□□□□ 0.41
HOXD3-201ENST00000249440 PDCD2LQ9BRP1 358 aa17.61■□□□□ 0.41
HOXD3-201ENST00000249440 NTPCRQ9BSD7 190 aaKnown RBP17.61■□□□□ 0.41
HOXD3-201ENST00000249440 C17orf75Q9HAS0 396 aa17.61■□□□□ 0.41
HOXD3-201ENST00000249440 PIM2Q9P1W9 311 aa17.61■□□□□ 0.41
HOXD3-201ENST00000249440 DDX20Q9UHI6 824 aaKnown RBP17.61■□□□□ 0.41
HOXD3-201ENST00000249440 PASKQ96RG2 1323 aa17.6■□□□□ 0.41
HOXD3-201ENST00000249440 TESPA1A2RU30 521 aaPredicted RBP17.6■□□□□ 0.41
HOXD3-201ENST00000249440 PHF20L1A8MW92 1017 aa17.6■□□□□ 0.41
HOXD3-201ENST00000249440 DRP2Q13474 957 aa17.6■□□□□ 0.41
HOXD3-201ENST00000249440 C6orf118Q5T5N4 469 aa17.6■□□□□ 0.41
HOXD3-201ENST00000249440 ACAD10Q6JQN1 1059 aa17.6■□□□□ 0.41
HOXD3-201ENST00000249440 RNF207Q6ZRF8 634 aa17.6■□□□□ 0.41
HOXD3-201ENST00000249440 OTUD6AQ7L8S5 288 aa17.6■□□□□ 0.41
HOXD3-201ENST00000249440 RDM1Q8NG50 284 aa17.6■□□□□ 0.41
HOXD3-201ENST00000249440 CABS1Q96KC9 395 aa17.6■□□□□ 0.41
HOXD3-201ENST00000249440 MFSD14AQ96MC6 490 aa17.6■□□□□ 0.41
HOXD3-201ENST00000249440 FBXL18Q96ME1 805 aa17.6■□□□□ 0.41
HOXD3-201ENST00000249440 FAM129AQ9BZQ8 928 aa17.6■□□□□ 0.41
HOXD3-201ENST00000249440 SPON1Q9HCB6 807 aa17.6■□□□□ 0.41
HOXD3-201ENST00000249440 PXMP2Q9NR77 195 aa17.6■□□□□ 0.41
HOXD3-201ENST00000249440 WDR81Q562E7 1941 aa17.6■□□□□ 0.41
HOXD3-201ENST00000249440 C5orf60A6NFR6 353 aa17.6■□□□□ 0.41
HOXD3-201ENST00000249440 WNT10BO00744 389 aa17.6■□□□□ 0.41
HOXD3-201ENST00000249440 TGFB2P61812 414 aa17.6■□□□□ 0.41
HOXD3-201ENST00000249440 ADCY2Q08462 1091 aa17.6■□□□□ 0.41
HOXD3-201ENST00000249440 ARHGEF16Q5VV41 709 aa17.6■□□□□ 0.41
HOXD3-201ENST00000249440 ANO5Q75V66 913 aa17.6■□□□□ 0.41
HOXD3-201ENST00000249440 TAS1R2Q8TE23 839 aa17.6■□□□□ 0.41
HOXD3-201ENST00000249440 SPIRE2Q8WWL2 714 aa17.6■□□□□ 0.41
HOXD3-201ENST00000249440 KIFC3Q9BVG8 833 aa17.6■□□□□ 0.41
HOXD3-201ENST00000249440 SEMA4AQ9H3S1 761 aa17.6■□□□□ 0.41
HOXD3-201ENST00000249440 RGS16O15492 202 aaPredicted RBP17.59■□□□□ 0.41
HOXD3-201ENST00000249440 RARAP10276 462 aa17.59■□□□□ 0.41
HOXD3-201ENST00000249440 RARGP13631 454 aa17.59■□□□□ 0.41
HOXD3-201ENST00000249440 NBPF9Q3BBW0 867 aa17.59■□□□□ 0.41
HOXD3-201ENST00000249440 ERMARDQ5T6L9 678 aa17.59■□□□□ 0.41
HOXD3-201ENST00000249440 CPLX4Q7Z7G2 160 aa17.59■□□□□ 0.41
HOXD3-201ENST00000249440 CNPY4Q8N129 248 aa17.59■□□□□ 0.41
HOXD3-201ENST00000249440 C12orf50Q8NA57 414 aaPredicted RBP17.59■□□□□ 0.41
HOXD3-201ENST00000249440 POMGNT1Q8WZA1 660 aa17.59■□□□□ 0.41
HOXD3-201ENST00000249440 DDX1Q92499 740 aaKnown RBP17.59■□□□□ 0.41
HOXD3-201ENST00000249440 ART4Q93070 314 aa17.59■□□□□ 0.41
HOXD3-201ENST00000249440 MOV10L1Q9BXT6 1211 aaKnown RBP17.59■□□□□ 0.41
HOXD3-201ENST00000249440 ZNRF3Q9ULT6 936 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms