RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 TUSC3Q13454 348 aa14□□□□□ -0.17
VPREB3-201ENST00000248948 E2F4Q16254 413 aa14□□□□□ -0.17
VPREB3-201ENST00000248948 PUS10Q3MIT2 529 aaKnown RBP14□□□□□ -0.17
VPREB3-201ENST00000248948 AXDND1Q5T1B0 1012 aaPredicted RBP14□□□□□ -0.17
VPREB3-201ENST00000248948 PLPP4Q5VZY2 271 aa14□□□□□ -0.17
VPREB3-201ENST00000248948 SHC4Q6S5L8 630 aa14□□□□□ -0.17
VPREB3-201ENST00000248948 MAP4K3Q8IVH8 894 aa14□□□□□ -0.17
VPREB3-201ENST00000248948 MYCT1Q8N699 235 aa14□□□□□ -0.17
VPREB3-201ENST00000248948 DDX12PQ92771 950 aa14□□□□□ -0.17
VPREB3-201ENST00000248948 FIZ1Q96SL8 496 aa14□□□□□ -0.17
VPREB3-201ENST00000248948 PYM1Q9BRP8 204 aaKnown RBP14□□□□□ -0.17
VPREB3-201ENST00000248948 LRRC27Q9C0I9 530 aa14□□□□□ -0.17
VPREB3-201ENST00000248948 MARCH5Q9NX47 278 aa14□□□□□ -0.17
VPREB3-201ENST00000248948 CLDND1Q9NY35 253 aa14□□□□□ -0.17
VPREB3-201ENST00000248948 ANKFY1Q9P2R3 1169 aa14□□□□□ -0.17
VPREB3-201ENST00000248948 USP20Q9Y2K6 914 aa14□□□□□ -0.17
VPREB3-201ENST00000248948 FAN1Q9Y2M0 1017 aa14□□□□□ -0.17
VPREB3-201ENST00000248948 IRAK3Q9Y616 596 aa14□□□□□ -0.17
VPREB3-201ENST00000248948 DENND4AQ7Z401 1863 aa13.99□□□□□ -0.17
VPREB3-201ENST00000248948 FRMD3A2A2Y4 597 aa13.99□□□□□ -0.17
VPREB3-201ENST00000248948 MYMKA6NI61 221 aa13.99□□□□□ -0.17
VPREB3-201ENST00000248948 PTGESO14684 152 aa13.99□□□□□ -0.17
VPREB3-201ENST00000248948 NRP1O14786 923 aa13.99□□□□□ -0.17
VPREB3-201ENST00000248948 HNRNPDLO14979 420 aaKnown RBP13.99□□□□□ -0.17
VPREB3-201ENST00000248948 TBX10O75333 385 aa13.99□□□□□ -0.17
VPREB3-201ENST00000248948 ALDH2P05091 517 aa13.99□□□□□ -0.17
VPREB3-201ENST00000248948 CTSAP10619 480 aa13.99□□□□□ -0.17
VPREB3-201ENST00000248948 OR1G1P47890 313 aa13.99□□□□□ -0.17
VPREB3-201ENST00000248948 ME1P48163 572 aa13.99□□□□□ -0.17
VPREB3-201ENST00000248948 NRIP1P48552 1158 aa13.99□□□□□ -0.17
VPREB3-201ENST00000248948 YARSP54577 528 aaKnown RBP13.99□□□□□ -0.17
VPREB3-201ENST00000248948 GTF2BQ00403 316 aa13.99□□□□□ -0.17
VPREB3-201ENST00000248948 MCL1Q07820 350 aa13.99□□□□□ -0.17
VPREB3-201ENST00000248948 TMC7Q7Z402 723 aa13.99□□□□□ -0.17
VPREB3-201ENST00000248948 RNF168Q8IYW5 571 aaPredicted RBP13.99□□□□□ -0.17
VPREB3-201ENST00000248948 VPS52Q8N1B4 723 aa13.99□□□□□ -0.17
VPREB3-201ENST00000248948 MICAL1Q8TDZ2 1067 aa13.99□□□□□ -0.17
VPREB3-201ENST00000248948 DNAJC19Q96DA6 116 aa13.99□□□□□ -0.17
VPREB3-201ENST00000248948 HERC2P3Q9BVR0 1158 aa13.99□□□□□ -0.17
VPREB3-201ENST00000248948 ZHX3Q9H4I2 956 aa13.99□□□□□ -0.17
VPREB3-201ENST00000248948 TLE6Q9H808 572 aa13.99□□□□□ -0.17
VPREB3-201ENST00000248948 OLFML3Q9NRN5 406 aa13.99□□□□□ -0.17
VPREB3-201ENST00000248948 KLK14Q9P0G3 267 aa13.99□□□□□ -0.17
VPREB3-201ENST00000248948 TBX20Q9UMR3 447 aa13.99□□□□□ -0.17
VPREB3-201ENST00000248948 ZDHHC9Q9Y397 364 aa13.99□□□□□ -0.17
VPREB3-201ENST00000248948 PCDHGC5Q9Y5F6 944 aa13.99□□□□□ -0.17
VPREB3-201ENST00000248948 MUC3AQ02505 3323 aa13.99□□□□□ -0.17
VPREB3-201ENST00000248948 BDP1A6H8Y1 2624 aa13.98□□□□□ -0.17
VPREB3-201ENST00000248948 MTCL1Q9Y4B5 1905 aaKnown RBP13.98□□□□□ -0.17
VPREB3-201ENST00000248948 C2orf71A6NGG8 1288 aa13.98□□□□□ -0.17
VPREB3-201ENST00000248948 GLP2RO95838 553 aa13.98□□□□□ -0.17
VPREB3-201ENST00000248948 EFEMP2O95967 443 aa13.98□□□□□ -0.17
VPREB3-201ENST00000248948 SOD2P04179 222 aa13.98□□□□□ -0.17
VPREB3-201ENST00000248948 THP07101 528 aa13.98□□□□□ -0.17
VPREB3-201ENST00000248948 NDUFV1P49821 464 aa13.98□□□□□ -0.17
VPREB3-201ENST00000248948 LIG4P49917 911 aa13.98□□□□□ -0.17
VPREB3-201ENST00000248948 KCNQ1P51787 676 aa13.98□□□□□ -0.17
VPREB3-201ENST00000248948 ADAM15Q13444 863 aa13.98□□□□□ -0.17
VPREB3-201ENST00000248948 ALCAMQ13740 583 aa13.98□□□□□ -0.17
VPREB3-201ENST00000248948 NAB2Q15742 525 aa13.98□□□□□ -0.17
VPREB3-201ENST00000248948 KYAT1Q16773 422 aa13.98□□□□□ -0.17
VPREB3-201ENST00000248948 FOXD4L6Q3SYB3 417 aaPredicted RBP13.98□□□□□ -0.17
VPREB3-201ENST00000248948 XKR4Q5GH76 650 aa13.98□□□□□ -0.17
VPREB3-201ENST00000248948 RESP18Q5W5W9 173 aa13.98□□□□□ -0.17
VPREB3-201ENST00000248948 FOXD4L3Q6VB84 417 aaPredicted RBP13.98□□□□□ -0.17
VPREB3-201ENST00000248948 DYMQ7RTS9 669 aa13.98□□□□□ -0.17
VPREB3-201ENST00000248948 SFR1Q86XK3 245 aa13.98□□□□□ -0.17
VPREB3-201ENST00000248948 PDILTQ8N807 584 aa13.98□□□□□ -0.17
VPREB3-201ENST00000248948 CEP120Q8N960 986 aa13.98□□□□□ -0.17
VPREB3-201ENST00000248948 MRPL43Q8N983 215 aaKnown RBP13.98□□□□□ -0.17
VPREB3-201ENST00000248948 IQUBQ8NA54 791 aa13.98□□□□□ -0.17
VPREB3-201ENST00000248948 ADAMTS19Q8TE59 1207 aa13.98□□□□□ -0.17
VPREB3-201ENST00000248948 BICD1Q96G01 975 aa13.98□□□□□ -0.17
VPREB3-201ENST00000248948 SNX27Q96L92 541 aa13.98□□□□□ -0.17
VPREB3-201ENST00000248948 TCHPQ9BT92 498 aa13.98□□□□□ -0.17
VPREB3-201ENST00000248948 COLEC11Q9BWP8 271 aa13.98□□□□□ -0.17
VPREB3-201ENST00000248948 VN1R3Q9BXE9 311 aa13.98□□□□□ -0.17
VPREB3-201ENST00000248948 COL25A1Q9BXS0 654 aaPredicted RBP13.98□□□□□ -0.17
VPREB3-201ENST00000248948 KBTBD4Q9NVX7 518 aa13.98□□□□□ -0.17
VPREB3-201ENST00000248948 MIOSQ9NXC5 875 aa13.98□□□□□ -0.17
VPREB3-201ENST00000248948 FAM13BQ9NYF5 915 aa13.98□□□□□ -0.17
VPREB3-201ENST00000248948 RCOR1Q9UKL0 485 aa13.98□□□□□ -0.17
VPREB3-201ENST00000248948 PCDHA7Q9UN72 937 aa13.98□□□□□ -0.17
VPREB3-201ENST00000248948 FAM50BQ9Y247 325 aa13.98□□□□□ -0.17
VPREB3-201ENST00000248948 GDAQ9Y2T3 454 aa13.98□□□□□ -0.17
VPREB3-201ENST00000248948 PRG3Q9Y2Y8 225 aaPredicted RBP13.98□□□□□ -0.17
VPREB3-201ENST00000248948 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.98□□□□□ -0.17
VPREB3-201ENST00000248948 TSC2P49815 1807 aa13.97□□□□□ -0.17
VPREB3-201ENST00000248948 SF3B1O75533 1304 aaKnown RBP eCLIP13.97□□□□□ -0.17
VPREB3-201ENST00000248948 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.97□□□□□ -0.17
VPREB3-201ENST00000248948 HIDE1A8MVS5 230 aa13.97□□□□□ -0.17
VPREB3-201ENST00000248948 TMEM189-UBE2V1I3L0A0 370 aa13.97□□□□□ -0.17
VPREB3-201ENST00000248948 CLDN3O15551 220 aa13.97□□□□□ -0.17
VPREB3-201ENST00000248948 PPP1R37O75864 691 aa13.97□□□□□ -0.17
VPREB3-201ENST00000248948 URODP06132 367 aa13.97□□□□□ -0.17
VPREB3-201ENST00000248948 BMP1P13497 986 aa13.97□□□□□ -0.17
VPREB3-201ENST00000248948 GTF2F1P35269 517 aaKnown RBP eCLIP13.97□□□□□ -0.17
VPREB3-201ENST00000248948 LTBRP36941 435 aa13.97□□□□□ -0.17
VPREB3-201ENST00000248948 KCNC3Q14003 757 aa13.97□□□□□ -0.17
VPREB3-201ENST00000248948 HSP90AA2PQ14568 343 aaPredicted RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms