RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 GGA3Q9NZ52 723 aa9.87□□□□□ -0.83
COL21A1-201ENST00000244728 L3MBTL1Q9Y468 752 aa9.87□□□□□ -0.83
COL21A1-201ENST00000244728 PDXKO00764 312 aa9.87□□□□□ -0.83
COL21A1-201ENST00000244728 OPHN1O60890 802 aa9.87□□□□□ -0.83
COL21A1-201ENST00000244728 SPAG7O75391 227 aa9.87□□□□□ -0.83
COL21A1-201ENST00000244728 KRT1P04264 644 aa9.87□□□□□ -0.83
COL21A1-201ENST00000244728 NR3C2P08235 984 aa9.87□□□□□ -0.83
COL21A1-201ENST00000244728 PAX7P23759 505 aa9.87□□□□□ -0.83
COL21A1-201ENST00000244728 PHBP35232 272 aa9.87□□□□□ -0.83
COL21A1-201ENST00000244728 FXR2P51116 673 aaKnown RBP eCLIP9.87□□□□□ -0.83
COL21A1-201ENST00000244728 JAK3P52333 1124 aa9.87□□□□□ -0.83
COL21A1-201ENST00000244728 BASP1P80723 227 aaKnown RBP9.87□□□□□ -0.83
COL21A1-201ENST00000244728 RCN2Q14257 317 aa9.87□□□□□ -0.83
COL21A1-201ENST00000244728 SLC15A2Q16348 729 aa9.87□□□□□ -0.83
COL21A1-201ENST00000244728 EDRF1Q3B7T1 1238 aa9.87□□□□□ -0.83
COL21A1-201ENST00000244728 YTHDF3Q7Z739 585 aaKnown RBP9.87□□□□□ -0.83
COL21A1-201ENST00000244728 ZFPM1Q8IX07 1006 aa9.87□□□□□ -0.83
COL21A1-201ENST00000244728 CYP2W1Q8TAV3 490 aa9.87□□□□□ -0.83
COL21A1-201ENST00000244728 ATG4CQ96DT6 458 aa9.87□□□□□ -0.83
COL21A1-201ENST00000244728 AP5M1Q9H0R1 490 aa9.87□□□□□ -0.83
COL21A1-201ENST00000244728 RPF1Q9H9Y2 349 aaKnown RBP9.87□□□□□ -0.83
COL21A1-201ENST00000244728 ATP6V0A4Q9HBG4 840 aa9.87□□□□□ -0.83
COL21A1-201ENST00000244728 SAYSD1Q9NPB0 183 aa9.87□□□□□ -0.83
COL21A1-201ENST00000244728 RIC1Q4ADV7 1423 aa9.86□□□□□ -0.83
COL21A1-201ENST00000244728 COL5A2P05997 1499 aaPredicted RBP9.86□□□□□ -0.83
COL21A1-201ENST00000244728 PHF2O75151 1096 aa9.86□□□□□ -0.83
COL21A1-201ENST00000244728 DCTN3O75935 186 aa9.86□□□□□ -0.83
COL21A1-201ENST00000244728 ATP6V1G2O95670 118 aa9.86□□□□□ -0.83
COL21A1-201ENST00000244728 YWHABP31946 246 aaKnown RBP9.86□□□□□ -0.83
COL21A1-201ENST00000244728 MRPS9P82933 396 aaKnown RBP9.86□□□□□ -0.83
COL21A1-201ENST00000244728 EPHA7Q15375 998 aa9.86□□□□□ -0.83
COL21A1-201ENST00000244728 PPP6R3Q5H9R7 873 aaPredicted RBP9.86□□□□□ -0.83
COL21A1-201ENST00000244728 ZC3H18Q86VM9 953 aaKnown RBP9.86□□□□□ -0.83
COL21A1-201ENST00000244728 CATSPER3Q86XQ3 398 aa9.86□□□□□ -0.83
COL21A1-201ENST00000244728 GLIS3Q8NEA6 775 aa9.86□□□□□ -0.83
COL21A1-201ENST00000244728 ZNF564Q8TBZ8 553 aaPredicted RBP9.86□□□□□ -0.83
COL21A1-201ENST00000244728 FBXO41Q8TF61 875 aa9.86□□□□□ -0.83
COL21A1-201ENST00000244728 KIFC3Q9BVG8 833 aa9.86□□□□□ -0.83
COL21A1-201ENST00000244728 KDM4CQ9H3R0 1056 aa9.86□□□□□ -0.83
COL21A1-201ENST00000244728 OSGEPQ9NPF4 335 aa9.86□□□□□ -0.83
COL21A1-201ENST00000244728 DDX4Q9NQI0 724 aaKnown RBP9.86□□□□□ -0.83
COL21A1-201ENST00000244728 DCTN4Q9UJW0 460 aa9.86□□□□□ -0.83
COL21A1-201ENST00000244728 TTC7AQ9ULT0 858 aaPredicted RBP9.86□□□□□ -0.83
COL21A1-201ENST00000244728 ALG6Q9Y672 507 aa9.86□□□□□ -0.83
COL21A1-201ENST00000244728 A0A0G2JND7 137 aa9.86□□□□□ -0.83
COL21A1-201ENST00000244728 UBOX5O94941 541 aa9.86□□□□□ -0.83
COL21A1-201ENST00000244728 FECHP22830 423 aa9.86□□□□□ -0.83
COL21A1-201ENST00000244728 CCND1P24385 295 aa9.86□□□□□ -0.83
COL21A1-201ENST00000244728 COG2Q14746 738 aa9.86□□□□□ -0.83
COL21A1-201ENST00000244728 EPC2Q52LR7 807 aa9.86□□□□□ -0.83
COL21A1-201ENST00000244728 TMC3Q7Z5M5 1100 aa9.86□□□□□ -0.83
COL21A1-201ENST00000244728 HACE1Q8IYU2 909 aa9.86□□□□□ -0.83
COL21A1-201ENST00000244728 SLC30A5Q8TAD4 765 aa9.86□□□□□ -0.83
COL21A1-201ENST00000244728 NUP85Q9BW27 656 aa9.86□□□□□ -0.83
COL21A1-201ENST00000244728 ADAM33Q9BZ11 813 aa9.86□□□□□ -0.83
COL21A1-201ENST00000244728 ACAD9Q9H845 621 aa9.86□□□□□ -0.83
COL21A1-201ENST00000244728 PCSK1NQ9UHG2 260 aa9.86□□□□□ -0.83
COL21A1-201ENST00000244728 OPLAHO14841 1288 aa9.86□□□□□ -0.83
COL21A1-201ENST00000244728 CYP26A1O43174 497 aa9.86□□□□□ -0.83
COL21A1-201ENST00000244728 ENTPD3O75355 529 aa9.86□□□□□ -0.83
COL21A1-201ENST00000244728 ARPP19P56211 112 aa9.86□□□□□ -0.83
COL21A1-201ENST00000244728 KRT17Q04695 432 aa9.86□□□□□ -0.83
COL21A1-201ENST00000244728 ZNF568Q3ZCX4 644 aa9.86□□□□□ -0.83
COL21A1-201ENST00000244728 PREPLQ4J6C6 727 aaPredicted RBP9.86□□□□□ -0.83
COL21A1-201ENST00000244728 OR6B3Q8NGW1 331 aa9.86□□□□□ -0.83
COL21A1-201ENST00000244728 POLR3FQ9H1D9 316 aaPredicted RBP9.86□□□□□ -0.83
COL21A1-201ENST00000244728 ZNF302Q9NR11 478 aa9.86□□□□□ -0.83
COL21A1-201ENST00000244728 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.86□□□□□ -0.83
COL21A1-201ENST00000244728 TNS2Q63HR2 1409 aa9.86□□□□□ -0.83
COL21A1-201ENST00000244728 NQO1P15559 274 aaKnown RBP9.86□□□□□ -0.83
COL21A1-201ENST00000244728 TNFRSF8P28908 595 aa9.86□□□□□ -0.83
COL21A1-201ENST00000244728 RPS6P62753 249 aaKnown RBP9.86□□□□□ -0.83
COL21A1-201ENST00000244728 IRX1P78414 480 aaPredicted RBP9.86□□□□□ -0.83
COL21A1-201ENST00000244728 ITKQ08881 620 aa9.86□□□□□ -0.83
COL21A1-201ENST00000244728 FUT2Q10981 343 aa9.86□□□□□ -0.83
COL21A1-201ENST00000244728 SMAD1Q15797 465 aaKnown RBP9.86□□□□□ -0.83
COL21A1-201ENST00000244728 ERICH1Q86X53 443 aa9.86□□□□□ -0.83
COL21A1-201ENST00000244728 CCDC125Q86Z20 511 aa9.86□□□□□ -0.83
COL21A1-201ENST00000244728 PSPC1Q8WXF1 523 aaKnown RBP9.86□□□□□ -0.83
COL21A1-201ENST00000244728 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.86□□□□□ -0.83
COL21A1-201ENST00000244728 GOLGA4Q13439 2230 aaKnown RBP9.85□□□□□ -0.83
COL21A1-201ENST00000244728 RICTORQ6R327 1708 aa9.85□□□□□ -0.83
COL21A1-201ENST00000244728 ATP5HO75947 161 aa9.85□□□□□ -0.83
COL21A1-201ENST00000244728 PLS3P13797 630 aa9.85□□□□□ -0.83
COL21A1-201ENST00000244728 PON1P27169 355 aa9.85□□□□□ -0.83
COL21A1-201ENST00000244728 MAPK7Q13164 816 aa9.85□□□□□ -0.83
COL21A1-201ENST00000244728 KYNUQ16719 465 aa9.85□□□□□ -0.83
COL21A1-201ENST00000244728 BBS9Q3SYG4 887 aa9.85□□□□□ -0.83
COL21A1-201ENST00000244728 ZNF667Q5HYK9 610 aa9.85□□□□□ -0.83
COL21A1-201ENST00000244728 NAIF1Q69YI7 327 aaPredicted RBP9.85□□□□□ -0.83
COL21A1-201ENST00000244728 CD302Q8IX05 232 aa9.85□□□□□ -0.83
COL21A1-201ENST00000244728 RNF149Q8NC42 400 aa9.85□□□□□ -0.83
COL21A1-201ENST00000244728 C18orf8Q96DM3 657 aa9.85□□□□□ -0.83
COL21A1-201ENST00000244728 C9orf72Q96LT7 481 aa9.85□□□□□ -0.83
COL21A1-201ENST00000244728 AGPAT1Q99943 283 aa9.85□□□□□ -0.83
COL21A1-201ENST00000244728 STK33Q9BYT3 514 aa9.85□□□□□ -0.83
COL21A1-201ENST00000244728 CARD9Q9H257 536 aa9.85□□□□□ -0.83
COL21A1-201ENST00000244728 PCDHAC2Q9Y5I4 1007 aa9.85□□□□□ -0.83
COL21A1-201ENST00000244728 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.85□□□□□ -0.83
COL21A1-201ENST00000244728 DDR1Q08345 913 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms