RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 GLIS2Q9BZE0 524 aaPredicted RBP12.83□□□□□ -0.36
SEC61A1-201ENST00000243253 PDGFDQ9GZP0 370 aaPredicted RBP12.83□□□□□ -0.36
SEC61A1-201ENST00000243253 WNT8AQ9H1J5 351 aa12.83□□□□□ -0.36
SEC61A1-201ENST00000243253 DBR1Q9UK59 544 aaKnown RBP12.83□□□□□ -0.36
SEC61A1-201ENST00000243253 EMSYQ7Z589 1322 aa12.83□□□□□ -0.36
SEC61A1-201ENST00000243253 ARP10275 920 aa12.83□□□□□ -0.36
SEC61A1-201ENST00000243253 TNFAIP3P21580 790 aa12.83□□□□□ -0.36
SEC61A1-201ENST00000243253 CHKAP35790 457 aa12.83□□□□□ -0.36
SEC61A1-201ENST00000243253 FKBP1AP62942 108 aaKnown RBP12.83□□□□□ -0.36
SEC61A1-201ENST00000243253 SPP2Q13103 211 aa12.83□□□□□ -0.36
SEC61A1-201ENST00000243253 ACCSLQ4AC99 568 aa12.83□□□□□ -0.36
SEC61A1-201ENST00000243253 MORC4Q8TE76 937 aa12.83□□□□□ -0.36
SEC61A1-201ENST00000243253 SEMA4DQ92854 862 aa12.83□□□□□ -0.36
SEC61A1-201ENST00000243253 BTBD6Q96KE9 485 aa12.83□□□□□ -0.36
SEC61A1-201ENST00000243253 PRMT6Q96LA8 375 aaPredicted RBP12.83□□□□□ -0.36
SEC61A1-201ENST00000243253 ROPN1BQ9BZX4 212 aaPredicted RBP12.83□□□□□ -0.36
SEC61A1-201ENST00000243253 ROPN1Q9HAT0 212 aaPredicted RBP12.83□□□□□ -0.36
SEC61A1-201ENST00000243253 ATP6V0A4Q9HBG4 840 aa12.83□□□□□ -0.36
SEC61A1-201ENST00000243253 NOD2Q9HC29 1040 aa12.83□□□□□ -0.36
SEC61A1-201ENST00000243253 EXOC3O60645 756 aa12.82□□□□□ -0.36
SEC61A1-201ENST00000243253 MAPTP10636 758 aaKnown RBP12.82□□□□□ -0.36
SEC61A1-201ENST00000243253 ADSSP30520 456 aa12.82□□□□□ -0.36
SEC61A1-201ENST00000243253 GBP1P32455 592 aa12.82□□□□□ -0.36
SEC61A1-201ENST00000243253 BNIP1Q12981 228 aa12.82□□□□□ -0.36
SEC61A1-201ENST00000243253 NEDD9Q14511 834 aa12.82□□□□□ -0.36
SEC61A1-201ENST00000243253 SLC47A2Q86VL8 602 aa12.82□□□□□ -0.36
SEC61A1-201ENST00000243253 FMNL3Q8IVF7 1028 aa12.82□□□□□ -0.36
SEC61A1-201ENST00000243253 HELQQ8TDG4 1101 aa12.82□□□□□ -0.36
SEC61A1-201ENST00000243253 SHC3Q92529 594 aa12.82□□□□□ -0.36
SEC61A1-201ENST00000243253 FAM212AQ96EL1 285 aa12.82□□□□□ -0.36
SEC61A1-201ENST00000243253 KIFC3Q9BVG8 833 aa12.82□□□□□ -0.36
SEC61A1-201ENST00000243253 ADAM33Q9BZ11 813 aa12.82□□□□□ -0.36
SEC61A1-201ENST00000243253 TMEM117Q9H0C3 514 aa12.82□□□□□ -0.36
SEC61A1-201ENST00000243253 ST6GALNAC4Q9H4F1 302 aa12.82□□□□□ -0.36
SEC61A1-201ENST00000243253 COQ4Q9Y3A0 265 aa12.82□□□□□ -0.36
SEC61A1-201ENST00000243253 FOXO6A8MYZ6 492 aa12.82□□□□□ -0.36
SEC61A1-201ENST00000243253 HSPA1LP34931 641 aa12.82□□□□□ -0.36
SEC61A1-201ENST00000243253 SOX10P56693 466 aa12.82□□□□□ -0.36
SEC61A1-201ENST00000243253 ODR4Q5SWX8 454 aa12.82□□□□□ -0.36
SEC61A1-201ENST00000243253 LRCH2Q5VUJ6 765 aa12.82□□□□□ -0.36
SEC61A1-201ENST00000243253 CBWD1Q9BRT8 395 aa12.82□□□□□ -0.36
SEC61A1-201ENST00000243253 RANBP17Q9H2T7 1088 aaKnown RBP12.82□□□□□ -0.36
SEC61A1-201ENST00000243253 CDC42EP4Q9H3Q1 356 aaKnown RBP12.82□□□□□ -0.36
SEC61A1-201ENST00000243253 UBE2TQ9NPD8 197 aaPredicted RBP12.82□□□□□ -0.36
SEC61A1-201ENST00000243253 ZNF277Q9NRM2 450 aaPredicted RBP12.82□□□□□ -0.36
SEC61A1-201ENST00000243253 PTPN22Q9Y2R2 807 aa12.82□□□□□ -0.36
SEC61A1-201ENST00000243253 GOLGA6L10A0A0M3HER8 536 aa12.82□□□□□ -0.36
SEC61A1-201ENST00000243253 GAS7O60861 476 aa12.82□□□□□ -0.36
SEC61A1-201ENST00000243253 HIP1RO75146 1068 aa12.82□□□□□ -0.36
SEC61A1-201ENST00000243253 KLF1Q13351 362 aaPredicted RBP12.82□□□□□ -0.36
SEC61A1-201ENST00000243253 DACT2Q5SW24 774 aa12.82□□□□□ -0.36
SEC61A1-201ENST00000243253 CCDC50Q8IVM0 306 aa12.82□□□□□ -0.36
SEC61A1-201ENST00000243253 FAM178BQ8IXR5 827 aa12.82□□□□□ -0.36
SEC61A1-201ENST00000243253 CYP4X1Q8N118 509 aa12.82□□□□□ -0.36
SEC61A1-201ENST00000243253 FAM118BQ9BPY3 351 aa12.82□□□□□ -0.36
SEC61A1-201ENST00000243253 TMOD2Q9NZR1 351 aa12.82□□□□□ -0.36
SEC61A1-201ENST00000243253 WHRNQ9P202 907 aa12.82□□□□□ -0.36
SEC61A1-201ENST00000243253 ECE2O60344 883 aa12.81□□□□□ -0.36
SEC61A1-201ENST00000243253 ELF1P32519 619 aa12.81□□□□□ -0.36
SEC61A1-201ENST00000243253 KCNJ1P48048 391 aa12.81□□□□□ -0.36
SEC61A1-201ENST00000243253 GTF2BQ00403 316 aa12.81□□□□□ -0.36
SEC61A1-201ENST00000243253 LMBRD2Q68DH5 695 aaPredicted RBP12.81□□□□□ -0.36
SEC61A1-201ENST00000243253 RELL1Q8IUW5 271 aa12.81□□□□□ -0.36
SEC61A1-201ENST00000243253 ARHGEF3Q9NR81 526 aa12.81□□□□□ -0.36
SEC61A1-201ENST00000243253 FRMD4BQ9Y2L6 1034 aa12.81□□□□□ -0.36
SEC61A1-201ENST00000243253 DOCK5Q9H7D0 1870 aa12.81□□□□□ -0.36
SEC61A1-201ENST00000243253 PLSCR1O15162 318 aa12.81□□□□□ -0.36
SEC61A1-201ENST00000243253 RGS16O15492 202 aaPredicted RBP12.81□□□□□ -0.36
SEC61A1-201ENST00000243253 ONECUT3O60422 494 aaPredicted RBP12.81□□□□□ -0.36
SEC61A1-201ENST00000243253 ADRB2P07550 413 aa12.81□□□□□ -0.36
SEC61A1-201ENST00000243253 BMP3P12645 472 aa12.81□□□□□ -0.36
SEC61A1-201ENST00000243253 EIF2AK2P19525 551 aaKnown RBP12.81□□□□□ -0.36
SEC61A1-201ENST00000243253 GCAP28676 217 aa12.81□□□□□ -0.36
SEC61A1-201ENST00000243253 SLCO1A2P46721 670 aa12.81□□□□□ -0.36
SEC61A1-201ENST00000243253 PSEN1P49768 467 aa12.81□□□□□ -0.36
SEC61A1-201ENST00000243253 MTM1Q13496 603 aa12.81□□□□□ -0.36
SEC61A1-201ENST00000243253 SLMAPQ14BN4 828 aa12.81□□□□□ -0.36
SEC61A1-201ENST00000243253 SPIRE2Q8WWL2 714 aa12.81□□□□□ -0.36
SEC61A1-201ENST00000243253 TMEM39BQ9GZU3 492 aa12.81□□□□□ -0.36
SEC61A1-201ENST00000243253 VAMP7P51809 220 aa12.81□□□□□ -0.36
SEC61A1-201ENST00000243253 KCNJ2P63252 427 aa12.81□□□□□ -0.36
SEC61A1-201ENST00000243253 TRMT10CQ7L0Y3 403 aaKnown RBP12.81□□□□□ -0.36
SEC61A1-201ENST00000243253 ANKS1BQ7Z6G8 1248 aa12.81□□□□□ -0.36
SEC61A1-201ENST00000243253 NACC1Q96RE7 527 aa12.81□□□□□ -0.36
SEC61A1-201ENST00000243253 INTS9Q9NV88 658 aaKnown RBP12.81□□□□□ -0.36
SEC61A1-201ENST00000243253 DONSONQ9NYP3 566 aa12.81□□□□□ -0.36
SEC61A1-201ENST00000243253 LGALS13Q9UHV8 139 aa12.81□□□□□ -0.36
SEC61A1-201ENST00000243253 GH1P01241 217 aa12.8□□□□□ -0.36
SEC61A1-201ENST00000243253 CCNB1P14635 433 aa12.8□□□□□ -0.36
SEC61A1-201ENST00000243253 ITGB5P18084 799 aa12.8□□□□□ -0.36
SEC61A1-201ENST00000243253 CEP55Q53EZ4 464 aa12.8□□□□□ -0.36
SEC61A1-201ENST00000243253 INTS8Q75QN2 995 aaKnown RBP12.8□□□□□ -0.36
SEC61A1-201ENST00000243253 ANKS4BQ8N8V4 417 aa12.8□□□□□ -0.36
SEC61A1-201ENST00000243253 SERPINB12Q96P63 405 aa12.8□□□□□ -0.36
SEC61A1-201ENST00000243253 ELAC2Q9BQ52 826 aaKnown RBP12.8□□□□□ -0.36
SEC61A1-201ENST00000243253 LXNQ9BS40 222 aa12.8□□□□□ -0.36
SEC61A1-201ENST00000243253 CTNNAL1Q9UBT7 734 aa12.8□□□□□ -0.36
SEC61A1-201ENST00000243253 PARP2Q9UGN5 583 aa12.8□□□□□ -0.36
SEC61A1-201ENST00000243253 TESPA1A2RU30 521 aaPredicted RBP12.8□□□□□ -0.36
SEC61A1-201ENST00000243253 UBOX5O94941 541 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms