RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 TTC26A0AVF1 554 aa10.06□□□□□ -0.8
CCDC113-201ENST00000219299 DRAP1Q14919 205 aaPredicted RBP10.06□□□□□ -0.8
CCDC113-201ENST00000219299 HHATQ5VTY9 493 aa10.06□□□□□ -0.8
CCDC113-201ENST00000219299 DENND2CQ68D51 928 aa10.06□□□□□ -0.8
CCDC113-201ENST00000219299 SARM1Q6SZW1 724 aa10.06□□□□□ -0.8
CCDC113-201ENST00000219299 ACRBPQ8NEB7 543 aa10.06□□□□□ -0.8
CCDC113-201ENST00000219299 ATP11BQ9Y2G3 1177 aa10.06□□□□□ -0.8
CCDC113-201ENST00000219299 CCDC151A5D8V7 595 aa10.06□□□□□ -0.8
CCDC113-201ENST00000219299 LRRC53A6NM62 1247 aa10.06□□□□□ -0.8
CCDC113-201ENST00000219299 MED7O43513 233 aa10.06□□□□□ -0.8
CCDC113-201ENST00000219299 KCNJ6P48051 423 aa10.06□□□□□ -0.8
CCDC113-201ENST00000219299 HNRNPH2P55795 449 aaKnown RBP10.06□□□□□ -0.8
CCDC113-201ENST00000219299 OR6B2Q6IFH4 312 aa10.06□□□□□ -0.8
CCDC113-201ENST00000219299 NOTUMQ6P988 496 aa10.06□□□□□ -0.8
CCDC113-201ENST00000219299 PASD1Q8IV76 773 aa10.06□□□□□ -0.8
CCDC113-201ENST00000219299 CCDC170Q8IYT3 715 aa10.06□□□□□ -0.8
CCDC113-201ENST00000219299 RPUSD2Q8IZ73 545 aaKnown RBP10.06□□□□□ -0.8
CCDC113-201ENST00000219299 CD99L2Q8TCZ2 262 aa10.06□□□□□ -0.8
CCDC113-201ENST00000219299 INPP4AQ96PE3 977 aaPredicted RBP10.06□□□□□ -0.8
CCDC113-201ENST00000219299 HOMER3Q9NSC5 361 aa10.06□□□□□ -0.8
CCDC113-201ENST00000219299 BLOC1S4Q9NUP1 217 aa10.06□□□□□ -0.8
CCDC113-201ENST00000219299 POLIQ9UNA4 740 aa10.06□□□□□ -0.8
CCDC113-201ENST00000219299 SNX9Q9Y5X1 595 aa10.06□□□□□ -0.8
CCDC113-201ENST00000219299 KIAA0391O15091 583 aaKnown RBP10.06□□□□□ -0.8
CCDC113-201ENST00000219299 EIF3DO15371 548 aaKnown RBP eCLIP10.06□□□□□ -0.8
CCDC113-201ENST00000219299 RGS16O15492 202 aaPredicted RBP10.06□□□□□ -0.8
CCDC113-201ENST00000219299 AOC2O75106 756 aa10.06□□□□□ -0.8
CCDC113-201ENST00000219299 MFAP3LO75121 409 aa10.06□□□□□ -0.8
CCDC113-201ENST00000219299 STK10O94804 968 aaKnown RBP10.06□□□□□ -0.8
CCDC113-201ENST00000219299 TCP1P17987 556 aaKnown RBP10.06□□□□□ -0.8
CCDC113-201ENST00000219299 NAMPTP43490 491 aa10.06□□□□□ -0.8
CCDC113-201ENST00000219299 MRPS9P82933 396 aaKnown RBP10.06□□□□□ -0.8
CCDC113-201ENST00000219299 CRHR2Q13324 411 aa10.06□□□□□ -0.8
CCDC113-201ENST00000219299 HSDL1Q3SXM5 330 aa10.06□□□□□ -0.8
CCDC113-201ENST00000219299 GLB1LQ6UWU2 654 aa10.06□□□□□ -0.8
CCDC113-201ENST00000219299 CBWD1Q9BRT8 395 aa10.06□□□□□ -0.8
CCDC113-201ENST00000219299 TRIM31Q9BZY9 425 aa10.06□□□□□ -0.8
CCDC113-201ENST00000219299 NHEJ1Q9H9Q4 299 aaPredicted RBP10.06□□□□□ -0.8
CCDC113-201ENST00000219299 KLK14Q9P0G3 267 aa10.06□□□□□ -0.8
CCDC113-201ENST00000219299 KLHL14Q9P2G3 628 aa10.06□□□□□ -0.8
CCDC113-201ENST00000219299 TXNDC16Q9P2K2 825 aa10.06□□□□□ -0.8
CCDC113-201ENST00000219299 PPP1R3GB7ZBB8 358 aa10.06□□□□□ -0.8
CCDC113-201ENST00000219299 TLR2O60603 784 aa10.06□□□□□ -0.8
CCDC113-201ENST00000219299 KPNA6O60684 536 aa10.06□□□□□ -0.8
CCDC113-201ENST00000219299 SEC31AO94979 1220 aaKnown RBP10.06□□□□□ -0.8
CCDC113-201ENST00000219299 NPTXRO95502 500 aa10.06□□□□□ -0.8
CCDC113-201ENST00000219299 SERPING1P05155 500 aa10.06□□□□□ -0.8
CCDC113-201ENST00000219299 MFSD10Q14728 455 aa10.06□□□□□ -0.8
CCDC113-201ENST00000219299 ZNF720Q7Z2F6 126 aa10.06□□□□□ -0.8
CCDC113-201ENST00000219299 SCN4BQ8IWT1 228 aa10.06□□□□□ -0.8
CCDC113-201ENST00000219299 INTS2Q9H0H0 1204 aaKnown RBP10.06□□□□□ -0.8
CCDC113-201ENST00000219299 TTLL3Q9Y4R7 772 aa10.06□□□□□ -0.8
CCDC113-201ENST00000219299 KIAA0100Q14667 2235 aaKnown RBP10.05□□□□□ -0.8
CCDC113-201ENST00000219299 CYP3A7-CYP3A51PA0A087WV96 503 aa10.05□□□□□ -0.8
CCDC113-201ENST00000219299 LRRD1A4D1F6 860 aa10.05□□□□□ -0.8
CCDC113-201ENST00000219299 KCNK3O14649 394 aa10.05□□□□□ -0.8
CCDC113-201ENST00000219299 CA12O43570 354 aa10.05□□□□□ -0.8
CCDC113-201ENST00000219299 ITGA4P13612 1032 aa10.05□□□□□ -0.8
CCDC113-201ENST00000219299 CYP3A7P24462 503 aa10.05□□□□□ -0.8
CCDC113-201ENST00000219299 ATP1A2P50993 1020 aa10.05□□□□□ -0.8
CCDC113-201ENST00000219299 EHHADHQ08426 723 aa10.05□□□□□ -0.8
CCDC113-201ENST00000219299 GLRA4Q5JXX5 417 aa10.05□□□□□ -0.8
CCDC113-201ENST00000219299 NFRKBQ6P4R8 1299 aa10.05□□□□□ -0.8
CCDC113-201ENST00000219299 STK38LQ9Y2H1 464 aa10.05□□□□□ -0.8
CCDC113-201ENST00000219299 TOGARAM1Q9Y4F4 1720 aa10.05□□□□□ -0.8
CCDC113-201ENST00000219299 SPATA31C2B4DYI2 1134 aa10.05□□□□□ -0.8
CCDC113-201ENST00000219299 KIF11P52732 1056 aa10.05□□□□□ -0.8
CCDC113-201ENST00000219299 LAMTOR4Q0VGL1 99 aa10.05□□□□□ -0.8
CCDC113-201ENST00000219299 ITGB3BPQ13352 177 aaPredicted RBP10.05□□□□□ -0.8
CCDC113-201ENST00000219299 TMEM132DQ14C87 1099 aa10.05□□□□□ -0.8
CCDC113-201ENST00000219299 PPP2R5EQ16537 467 aa10.05□□□□□ -0.8
CCDC113-201ENST00000219299 ZNF112Q9UJU3 913 aa10.05□□□□□ -0.8
CCDC113-201ENST00000219299 NHSQ6T4R5 1651 aa10.05□□□□□ -0.8
CCDC113-201ENST00000219299 A8MXQ7 604 aa10.05□□□□□ -0.8
CCDC113-201ENST00000219299 CD44P16070 742 aaKnown RBP10.05□□□□□ -0.8
CCDC113-201ENST00000219299 GUCY2CP25092 1073 aa10.05□□□□□ -0.8
CCDC113-201ENST00000219299 PSEN2P49810 448 aa10.05□□□□□ -0.8
CCDC113-201ENST00000219299 HADHQ16836 314 aaKnown RBP10.05□□□□□ -0.8
CCDC113-201ENST00000219299 ADAT2Q7Z6V5 191 aaKnown RBP10.05□□□□□ -0.8
CCDC113-201ENST00000219299 SIX6OS1Q8N1H7 587 aa10.05□□□□□ -0.8
CCDC113-201ENST00000219299 ZNF710Q8N1W2 664 aa10.05□□□□□ -0.8
CCDC113-201ENST00000219299 CLEC4DQ8WXI8 215 aa10.05□□□□□ -0.8
CCDC113-201ENST00000219299 PGBD4Q96DM1 585 aa10.05□□□□□ -0.8
CCDC113-201ENST00000219299 CEP72Q9P209 647 aa10.05□□□□□ -0.8
CCDC113-201ENST00000219299 DBR1Q9UK59 544 aaKnown RBP10.05□□□□□ -0.8
CCDC113-201ENST00000219299 SNED1Q8TER0 1413 aa10.05□□□□□ -0.8
CCDC113-201ENST00000219299 NDUFA10O95299 355 aa10.05□□□□□ -0.8
CCDC113-201ENST00000219299 PEX19P40855 299 aa10.05□□□□□ -0.8
CCDC113-201ENST00000219299 NCOA4Q13772 614 aa10.05□□□□□ -0.8
CCDC113-201ENST00000219299 ICE2Q659A1 982 aa10.05□□□□□ -0.8
CCDC113-201ENST00000219299 CBWD2Q8IUF1 395 aa10.05□□□□□ -0.8
CCDC113-201ENST00000219299 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.05□□□□□ -0.8
CCDC113-201ENST00000219299 TOM1L1O75674 476 aa10.04□□□□□ -0.8
CCDC113-201ENST00000219299 FGFR4P22455 802 aa10.04□□□□□ -0.8
CCDC113-201ENST00000219299 FMO5P49326 533 aa10.04□□□□□ -0.8
CCDC113-201ENST00000219299 CLCN6P51797 869 aa10.04□□□□□ -0.8
CCDC113-201ENST00000219299 IRX4P78413 519 aa10.04□□□□□ -0.8
CCDC113-201ENST00000219299 PLCB4Q15147 1175 aa10.04□□□□□ -0.8
CCDC113-201ENST00000219299 KYAT1Q16773 422 aa10.04□□□□□ -0.8
CCDC113-201ENST00000219299 ANKRD20A3Q5VUR7 823 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms