RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 RNF216Q9NWF9 866 aaPredicted RBP32.02■■■□□ 2.72
PABPN1-201ENST00000216727 MAP2K7O14733 419 aa32.02■■■□□ 2.72
PABPN1-201ENST00000216727 SGPL1O95470 568 aa32.02■■■□□ 2.72
PABPN1-201ENST00000216727 ACOT2P49753 483 aa32.02■■■□□ 2.72
PABPN1-201ENST00000216727 FKBP1BP68106 108 aa32.02■■■□□ 2.72
PABPN1-201ENST00000216727 ZNF792Q3KQV3 632 aa32.02■■■□□ 2.72
PABPN1-201ENST00000216727 ARMCX2Q7L311 632 aa32.02■■■□□ 2.72
PABPN1-201ENST00000216727 MS4A14Q96JA4 679 aa32.02■■■□□ 2.72
PABPN1-201ENST00000216727 PBKQ96KB5 322 aa32.02■■■□□ 2.72
PABPN1-201ENST00000216727 CALR3Q96L12 384 aaKnown RBP32.02■■■□□ 2.72
PABPN1-201ENST00000216727 EHD2Q9NZN4 543 aa32.02■■■□□ 2.72
PABPN1-201ENST00000216727 SUCLA2Q9P2R7 463 aaPredicted RBP32.02■■■□□ 2.72
PABPN1-201ENST00000216727 STXBP5LQ9Y2K9 1186 aa32.02■■■□□ 2.72
PABPN1-201ENST00000216727 EDN1P05305 212 aa32.01■■■□□ 2.71
PABPN1-201ENST00000216727 POTEJP0CG39 1038 aa32.01■■■□□ 2.71
PABPN1-201ENST00000216727 GZMAP12544 262 aa32.01■■■□□ 2.71
PABPN1-201ENST00000216727 MKRN4PQ13434 485 aaPredicted RBP32.01■■■□□ 2.71
PABPN1-201ENST00000216727 TCEAL1Q15170 157 aa32.01■■■□□ 2.71
PABPN1-201ENST00000216727 NOP9Q86U38 636 aaKnown RBP32.01■■■□□ 2.71
PABPN1-201ENST00000216727 SMARCAL1Q9NZC9 954 aa32.01■■■□□ 2.71
PABPN1-201ENST00000216727 TULP1O00294 542 aaPredicted RBP32■■■□□ 2.71
PABPN1-201ENST00000216727 CYP26A1O43174 497 aa32■■■□□ 2.71
PABPN1-201ENST00000216727 C4BPAP04003 597 aaKnown RBP32■■■□□ 2.71
PABPN1-201ENST00000216727 PLA2G4AP47712 749 aa32■■■□□ 2.71
PABPN1-201ENST00000216727 PEX26Q7Z412 305 aa32■■■□□ 2.71
PABPN1-201ENST00000216727 ABRAQ8N0Z2 381 aa32■■■□□ 2.71
PABPN1-201ENST00000216727 COPS5Q92905 334 aa32■■■□□ 2.71
PABPN1-201ENST00000216727 CCDC113Q9H0I3 377 aa32■■■□□ 2.71
PABPN1-201ENST00000216727 UTP3Q9NQZ2 479 aaKnown RBP eCLIP32■■■□□ 2.716e-8■■□□□ 14
PABPN1-201ENST00000216727 PDGFCQ9NRA1 345 aa32■■■□□ 2.71
PABPN1-201ENST00000216727 RBAKQ9NYW8 714 aaPredicted RBP32■■■□□ 2.71
PABPN1-201ENST00000216727 BTBD19C9JJ37 291 aa32■■■□□ 2.71
PABPN1-201ENST00000216727 CHRNB2P17787 502 aa32■■■□□ 2.71
PABPN1-201ENST00000216727 ABCB4P21439 1286 aa32■■■□□ 2.71
PABPN1-201ENST00000216727 HADHBP55084 474 aaKnown RBP32■■■□□ 2.71
PABPN1-201ENST00000216727 LAMTOR4Q0VGL1 99 aa32■■■□□ 2.71
PABPN1-201ENST00000216727 HDXQ7Z353 690 aa32■■■□□ 2.71
PABPN1-201ENST00000216727 THAP2Q9H0W7 228 aa32■■■□□ 2.71
PABPN1-201ENST00000216727 ANKFY1Q9P2R3 1169 aa32■■■□□ 2.71
PABPN1-201ENST00000216727 CCL15-CCL14A0A0B4J2E2 113 aa31.99■■■□□ 2.71
PABPN1-201ENST00000216727 MSCO60682 206 aa31.99■■■□□ 2.71
PABPN1-201ENST00000216727 TNNI1P19237 187 aa31.99■■■□□ 2.71
PABPN1-201ENST00000216727 GCLCP48506 637 aaPredicted RBP31.99■■■□□ 2.71
PABPN1-201ENST00000216727 CCL15Q16663 113 aa31.99■■■□□ 2.71
PABPN1-201ENST00000216727 ANKRD23Q86SG2 305 aa31.99■■■□□ 2.71
PABPN1-201ENST00000216727 DAAM2Q86T65 1068 aa31.99■■■□□ 2.71
PABPN1-201ENST00000216727 NT5DC3Q86UY8 548 aa31.99■■■□□ 2.71
PABPN1-201ENST00000216727 RHOT2Q8IXI1 618 aa31.99■■■□□ 2.71
PABPN1-201ENST00000216727 MSL3Q8N5Y2 521 aaKnown RBP31.99■■■□□ 2.71
PABPN1-201ENST00000216727 TATDN2Q93075 761 aa31.99■■■□□ 2.71
PABPN1-201ENST00000216727 GOLPH3Q9H4A6 298 aa31.99■■■□□ 2.71
PABPN1-201ENST00000216727 SUGCTQ9HAC7 445 aa31.99■■■□□ 2.71
PABPN1-201ENST00000216727 PDE11AQ9HCR9 933 aa31.99■■■□□ 2.71
PABPN1-201ENST00000216727 OSGEPQ9NPF4 335 aa31.99■■■□□ 2.71
PABPN1-201ENST00000216727 MORF4L1Q9UBU8 362 aa31.99■■■□□ 2.71
PABPN1-201ENST00000216727 RTN2O75298 545 aa31.99■■■□□ 2.71
PABPN1-201ENST00000216727 ZBTB48P10074 688 aaPredicted RBP31.99■■■□□ 2.71
PABPN1-201ENST00000216727 GLE1Q53GS7 698 aaKnown RBP31.99■■■□□ 2.71
PABPN1-201ENST00000216727 SLC47A2Q86VL8 602 aa31.99■■■□□ 2.71
PABPN1-201ENST00000216727 MRPL4Q9BYD3 311 aaKnown RBP31.99■■■□□ 2.71
PABPN1-201ENST00000216727 RBM12Q9NTZ6 932 aaKnown RBP31.99■■■□□ 2.71
PABPN1-201ENST00000216727 KCNK3O14649 394 aa31.98■■■□□ 2.71
PABPN1-201ENST00000216727 STRNO43815 780 aa31.98■■■□□ 2.71
PABPN1-201ENST00000216727 HBP1O60381 514 aa31.98■■■□□ 2.71
PABPN1-201ENST00000216727 FTLP02792 175 aaPredicted RBP31.98■■■□□ 2.71
PABPN1-201ENST00000216727 CYP11B1P15538 503 aa31.98■■■□□ 2.71
PABPN1-201ENST00000216727 DNA2P51530 1060 aa31.98■■■□□ 2.71
PABPN1-201ENST00000216727 WNT7BP56706 349 aa31.98■■■□□ 2.71
PABPN1-201ENST00000216727 MAP9Q49MG5 647 aa31.98■■■□□ 2.71
PABPN1-201ENST00000216727 ARHGEF26Q96DR7 871 aa31.98■■■□□ 2.71
PABPN1-201ENST00000216727 C1orf112Q9NSG2 853 aa31.98■■■□□ 2.71
PABPN1-201ENST00000216727 ADORA2AP29274 412 aa31.97■■■□□ 2.71
PABPN1-201ENST00000216727 MATR3P43243 847 aaKnown RBP eCLIP31.97■■■□□ 2.71
PABPN1-201ENST00000216727 ZBTB8OSQ8IWT0 167 aa31.97■■■□□ 2.71
PABPN1-201ENST00000216727 BRI3BPQ8WY22 251 aa31.97■■■□□ 2.71
PABPN1-201ENST00000216727 PCDHB18PQ96TA0 734 aa31.97■■■□□ 2.71
PABPN1-201ENST00000216727 LRRC1Q9BTT6 524 aa31.97■■■□□ 2.71
PABPN1-201ENST00000216727 C2orf40Q9H1Z8 148 aa31.97■■■□□ 2.71
PABPN1-201ENST00000216727 VTA1Q9NP79 307 aa31.97■■■□□ 2.71
PABPN1-201ENST00000216727 CLDN3O15551 220 aa31.97■■■□□ 2.71
PABPN1-201ENST00000216727 BUB1BO60566 1050 aaPredicted RBP31.97■■■□□ 2.71
PABPN1-201ENST00000216727 TOM1L1O75674 476 aa31.97■■■□□ 2.71
PABPN1-201ENST00000216727 TMEM63BQ5T3F8 832 aa31.97■■■□□ 2.71
PABPN1-201ENST00000216727 TDRD10Q5VZ19 366 aaKnown RBP31.97■■■□□ 2.71
PABPN1-201ENST00000216727 ZNF467Q7Z7K2 595 aaPredicted RBP31.97■■■□□ 2.71
PABPN1-201ENST00000216727 HES6Q96HZ4 224 aa31.97■■■□□ 2.71
PABPN1-201ENST00000216727 CGRRF1Q99675 332 aa31.97■■■□□ 2.71
PABPN1-201ENST00000216727 UBXN6Q9BZV1 441 aa31.97■■■□□ 2.71
PABPN1-201ENST00000216727 PDE6CP51160 858 aa31.96■■■□□ 2.71
PABPN1-201ENST00000216727 FMO1Q01740 532 aa31.96■■■□□ 2.71
PABPN1-201ENST00000216727 CDR2Q01850 454 aa31.96■■■□□ 2.71
PABPN1-201ENST00000216727 LAMC2Q13753 1193 aa31.96■■■□□ 2.71
PABPN1-201ENST00000216727 WDR44Q5JSH3 913 aa31.96■■■□□ 2.71
PABPN1-201ENST00000216727 TAPT1Q6NXT6 567 aa31.96■■■□□ 2.71
PABPN1-201ENST00000216727 ACTRT1Q8TDG2 376 aa31.96■■■□□ 2.71
PABPN1-201ENST00000216727 SELENOOQ9BVL4 669 aa31.96■■■□□ 2.71
PABPN1-201ENST00000216727 TRPC6Q9Y210 931 aa31.96■■■□□ 2.71
PABPN1-201ENST00000216727 CNTNAP2Q9UHC6 1331 aa31.96■■■□□ 2.71
PABPN1-201ENST00000216727 HLA-DRAP01903 254 aa31.95■■■□□ 2.71
PABPN1-201ENST00000216727 ARHGAP1Q07960 439 aa31.95■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms