RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 SRLQ86TD4 932 aa15.39■□□□□ 0.05
SPTLC2-201ENST00000216484 HS6ST3Q8IZP7 471 aa15.39■□□□□ 0.05
SPTLC2-201ENST00000216484 THAP9Q9H5L6 903 aa15.39■□□□□ 0.05
SPTLC2-201ENST00000216484 SFI1A8K8P3 1242 aa15.39■□□□□ 0.05
SPTLC2-201ENST00000216484 AIM2O14862 343 aa15.39■□□□□ 0.05
SPTLC2-201ENST00000216484 CLDN3O15551 220 aa15.39■□□□□ 0.05
SPTLC2-201ENST00000216484 ALBP02768 609 aa15.39■□□□□ 0.05
SPTLC2-201ENST00000216484 GPATCH4Q5T3I0 446 aaKnown RBP15.39■□□□□ 0.05
SPTLC2-201ENST00000216484 C19orf44Q9H6X5 657 aa15.39■□□□□ 0.05
SPTLC2-201ENST00000216484 MBD2Q9UBB5 411 aa15.39■□□□□ 0.05
SPTLC2-201ENST00000216484 S100A9P06702 114 aaKnown RBP15.39■□□□□ 0.05
SPTLC2-201ENST00000216484 CUL4AQ13619 759 aa15.39■□□□□ 0.05
SPTLC2-201ENST00000216484 EFHBQ8N7U6 833 aa15.39■□□□□ 0.05
SPTLC2-201ENST00000216484 AP3B1O00203 1094 aa15.39■□□□□ 0.05
SPTLC2-201ENST00000216484 KRT6AP02538 564 aa15.39■□□□□ 0.05
SPTLC2-201ENST00000216484 KRT6BP04259 564 aa15.39■□□□□ 0.05
SPTLC2-201ENST00000216484 DARSP14868 501 aaKnown RBP15.39■□□□□ 0.05
SPTLC2-201ENST00000216484 KRT6CP48668 564 aa15.39■□□□□ 0.05
SPTLC2-201ENST00000216484 ZNF235Q14590 738 aa15.39■□□□□ 0.05
SPTLC2-201ENST00000216484 OLFM1Q99784 485 aa15.39■□□□□ 0.05
SPTLC2-201ENST00000216484 CLEC4MQ9H2X3 399 aaPredicted RBP15.39■□□□□ 0.05
SPTLC2-201ENST00000216484 MAN1C1Q9NR34 630 aa15.39■□□□□ 0.05
SPTLC2-201ENST00000216484 SLC9A2Q9UBY0 812 aa15.39■□□□□ 0.05
SPTLC2-201ENST00000216484 MKRN3Q13064 507 aaKnown RBP15.38■□□□□ 0.05
SPTLC2-201ENST00000216484 NUDT18Q6ZVK8 323 aa15.38■□□□□ 0.05
SPTLC2-201ENST00000216484 CDYLQ9Y232 598 aa15.38■□□□□ 0.05
SPTLC2-201ENST00000216484 ZC3H4Q9UPT8 1303 aaKnown RBP15.38■□□□□ 0.05
SPTLC2-201ENST00000216484 DDHD2O94830 711 aa15.38■□□□□ 0.05
SPTLC2-201ENST00000216484 MAPKAPK2P49137 400 aa15.38■□□□□ 0.05
SPTLC2-201ENST00000216484 CSNK2BP67870 215 aa15.38■□□□□ 0.05
SPTLC2-201ENST00000216484 NDUFA5Q16718 116 aa15.38■□□□□ 0.05
SPTLC2-201ENST00000216484 ALKBH5Q6P6C2 394 aaKnown RBP15.38■□□□□ 0.05
SPTLC2-201ENST00000216484 MB21D1Q8N884 522 aa15.38■□□□□ 0.05
SPTLC2-201ENST00000216484 ATP11CQ8NB49 1132 aa15.38■□□□□ 0.05
SPTLC2-201ENST00000216484 GRAMD1AQ96CP6 724 aa15.38■□□□□ 0.05
SPTLC2-201ENST00000216484 MYLK2Q9H1R3 596 aa15.38■□□□□ 0.05
SPTLC2-201ENST00000216484 CCDC134Q9H6E4 229 aa15.38■□□□□ 0.05
SPTLC2-201ENST00000216484 STRNO43815 780 aa15.38■□□□□ 0.05
SPTLC2-201ENST00000216484 PFKFB2O60825 505 aa15.38■□□□□ 0.05
SPTLC2-201ENST00000216484 HSPA9P38646 679 aaKnown RBP15.38■□□□□ 0.05
SPTLC2-201ENST00000216484 ZBED6P86452 979 aa15.38■□□□□ 0.05
SPTLC2-201ENST00000216484 IDI1Q13907 227 aa15.38■□□□□ 0.05
SPTLC2-201ENST00000216484 ZNF568Q3ZCX4 644 aa15.38■□□□□ 0.05
SPTLC2-201ENST00000216484 ITPRIPL1Q6GPH6 555 aa15.38■□□□□ 0.05
SPTLC2-201ENST00000216484 TRIM63Q969Q1 353 aa15.38■□□□□ 0.05
SPTLC2-201ENST00000216484 A1BGP04217 495 aa15.38■□□□□ 0.05
SPTLC2-201ENST00000216484 MYBL1P10243 752 aa15.38■□□□□ 0.05
SPTLC2-201ENST00000216484 GPC5P78333 572 aa15.38■□□□□ 0.05
SPTLC2-201ENST00000216484 MRPS35P82673 323 aaKnown RBP15.38■□□□□ 0.05
SPTLC2-201ENST00000216484 NCAPHQ15003 741 aa15.38■□□□□ 0.05
SPTLC2-201ENST00000216484 SYCP2LQ5T4T6 812 aa15.38■□□□□ 0.05
SPTLC2-201ENST00000216484 PGBD3Q8N328 593 aa15.38■□□□□ 0.05
SPTLC2-201ENST00000216484 DDHD1Q8NEL9 900 aa15.38■□□□□ 0.05
SPTLC2-201ENST00000216484 TSEN34Q9BSV6 310 aaKnown RBP15.38■□□□□ 0.05
SPTLC2-201ENST00000216484 PCDHB8Q9UN66 801 aa15.38■□□□□ 0.05
SPTLC2-201ENST00000216484 NPATQ14207 1427 aa15.38■□□□□ 0.05
SPTLC2-201ENST00000216484 LRRC24Q50LG9 513 aa15.38■□□□□ 0.05
SPTLC2-201ENST00000216484 YAF2Q8IY57 180 aa15.38■□□□□ 0.05
SPTLC2-201ENST00000216484 ZFATQ9P243 1243 aa15.38■□□□□ 0.05
SPTLC2-201ENST00000216484 GFPT1Q06210 699 aaPredicted RBP15.38■□□□□ 0.05
SPTLC2-201ENST00000216484 SLC16A2P36021 539 aa15.37■□□□□ 0.05
SPTLC2-201ENST00000216484 MDM1Q8TC05 714 aa15.37■□□□□ 0.05
SPTLC2-201ENST00000216484 ZNF496Q96IT1 587 aaPredicted RBP15.37■□□□□ 0.05
SPTLC2-201ENST00000216484 NESP48681 1621 aa15.37■□□□□ 0.05
SPTLC2-201ENST00000216484 KCNN4O15554 427 aa15.37■□□□□ 0.05
SPTLC2-201ENST00000216484 HSMCR30P0CW71 290 aa15.37■□□□□ 0.05
SPTLC2-201ENST00000216484 STX3Q13277 289 aa15.37■□□□□ 0.05
SPTLC2-201ENST00000216484 ELMO2Q96JJ3 720 aa15.37■□□□□ 0.05
SPTLC2-201ENST00000216484 WWP1Q9H0M0 922 aa15.37■□□□□ 0.05
SPTLC2-201ENST00000216484 SPASTQ9UBP0 616 aa15.37■□□□□ 0.05
SPTLC2-201ENST00000216484 GPR1P46091 355 aa15.37■□□□□ 0.05
SPTLC2-201ENST00000216484 RPS7P62081 194 aaKnown RBP15.37■□□□□ 0.05
SPTLC2-201ENST00000216484 VSNL1P62760 191 aa15.37■□□□□ 0.05
SPTLC2-201ENST00000216484 RNF25Q96BH1 459 aaPredicted RBP15.37■□□□□ 0.05
SPTLC2-201ENST00000216484 MARCOQ9UEW3 520 aaPredicted RBP15.37■□□□□ 0.05
SPTLC2-201ENST00000216484 POLG2Q9UHN1 485 aa15.37■□□□□ 0.05
SPTLC2-201ENST00000216484 UBTFL6P0CB48 400 aaPredicted RBP15.37■□□□□ 0.05
SPTLC2-201ENST00000216484 FGFR4P22455 802 aa15.37■□□□□ 0.05
SPTLC2-201ENST00000216484 LRRC63Q05C16 580 aa15.37■□□□□ 0.05
SPTLC2-201ENST00000216484 DENND6AQ8IWF6 608 aa15.37■□□□□ 0.05
SPTLC2-201ENST00000216484 NDST4Q9H3R1 872 aa15.37■□□□□ 0.05
SPTLC2-201ENST00000216484 TRPC7Q9HCX4 862 aa15.37■□□□□ 0.05
SPTLC2-201ENST00000216484 A0A0D9SFI3 127 aa15.37■□□□□ 0.05
SPTLC2-201ENST00000216484 APOL1O14791 398 aa15.37■□□□□ 0.05
SPTLC2-201ENST00000216484 APRTP07741 180 aa15.37■□□□□ 0.05
SPTLC2-201ENST00000216484 HIST1H2AGP0C0S8 130 aaPredicted RBP15.37■□□□□ 0.05
SPTLC2-201ENST00000216484 HIST1H2ADP20671 130 aa15.37■□□□□ 0.05
SPTLC2-201ENST00000216484 NFRKBQ6P4R8 1299 aa15.37■□□□□ 0.05
SPTLC2-201ENST00000216484 TTC33Q6PID6 262 aaPredicted RBP15.37■□□□□ 0.05
SPTLC2-201ENST00000216484 POTEAQ6S8J7 498 aa15.37■□□□□ 0.05
SPTLC2-201ENST00000216484 PPP4R3CPQ6ZMV5 832 aa15.37■□□□□ 0.05
SPTLC2-201ENST00000216484 HIST1H2AHQ96KK5 128 aa15.37■□□□□ 0.05
SPTLC2-201ENST00000216484 HIST1H2AJQ99878 128 aa15.37■□□□□ 0.05
SPTLC2-201ENST00000216484 H2AFJQ9BTM1 129 aa15.37■□□□□ 0.05
SPTLC2-201ENST00000216484 TSPOAP1O95153 1857 aa15.37■□□□□ 0.05
SPTLC2-201ENST00000216484 CLRN2A0PK11 232 aa15.37■□□□□ 0.05
SPTLC2-201ENST00000216484 ARSEP51690 589 aa15.37■□□□□ 0.05
SPTLC2-201ENST00000216484 CCDC137Q6PK04 289 aaKnown RBP15.37■□□□□ 0.05
SPTLC2-201ENST00000216484 C11orf57Q6ZUT1 292 aaPredicted RBP15.37■□□□□ 0.05
SPTLC2-201ENST00000216484 SPATA16Q9BXB7 569 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms