RNA–Protein interactions for RNA: ENST00000216288.11

MARK3-201, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best) BASIC

Gene MARK3, Length 2,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-201ENST00000216288 PRAMEF18Q5VWM3 479 aa13.12□□□□□ -0.31
MARK3-201ENST00000216288 BTNL9Q6UXG8 535 aa13.12□□□□□ -0.31
MARK3-201ENST00000216288 HOOK3Q86VS8 718 aa13.12□□□□□ -0.31
MARK3-201ENST00000216288 FAM129AQ9BZQ8 928 aa13.12□□□□□ -0.31
MARK3-201ENST00000216288 TMOD2Q9NZR1 351 aa13.12□□□□□ -0.31
MARK3-201ENST00000216288 TTC7AQ9ULT0 858 aaPredicted RBP13.12□□□□□ -0.31
MARK3-201ENST00000216288 TPX2Q9ULW0 747 aaKnown RBP13.12□□□□□ -0.31
MARK3-201ENST00000216288 MRPL11Q9Y3B7 192 aaKnown RBP13.12□□□□□ -0.31
MARK3-201ENST00000216288 PFASO15067 1338 aa13.12□□□□□ -0.31
MARK3-201ENST00000216288 TCP11X1B4DZS4 312 aa13.12□□□□□ -0.31
MARK3-201ENST00000216288 RRM1P23921 792 aa13.12□□□□□ -0.31
MARK3-201ENST00000216288 CNGA1P29973 690 aa13.12□□□□□ -0.31
MARK3-201ENST00000216288 WNT7BP56706 349 aa13.12□□□□□ -0.31
MARK3-201ENST00000216288 SETQ01105 290 aaPredicted RBP13.12□□□□□ -0.31
MARK3-201ENST00000216288 AUHQ13825 339 aaKnown RBP13.12□□□□□ -0.31
MARK3-201ENST00000216288 EMC10Q5UCC4 262 aa13.12□□□□□ -0.31
MARK3-201ENST00000216288 KRT27Q7Z3Y8 459 aa13.12□□□□□ -0.31
MARK3-201ENST00000216288 EXOC3L1Q86VI1 746 aa13.12□□□□□ -0.31
MARK3-201ENST00000216288 SUGP1Q8IWZ8 645 aaKnown RBP13.12□□□□□ -0.31
MARK3-201ENST00000216288 RHOT2Q8IXI1 618 aa13.12□□□□□ -0.31
MARK3-201ENST00000216288 CYP4X1Q8N118 509 aa13.12□□□□□ -0.31
MARK3-201ENST00000216288 ATXN2LQ8WWM7 1075 aaKnown RBP13.12□□□□□ -0.31
MARK3-201ENST00000216288 BICD1Q96G01 975 aa13.12□□□□□ -0.31
MARK3-201ENST00000216288 ACCSQ96QU6 501 aa13.12□□□□□ -0.31
MARK3-201ENST00000216288 NAP1L3Q99457 506 aaPredicted RBP13.12□□□□□ -0.31
MARK3-201ENST00000216288 C10orf88Q9H8K7 445 aa13.12□□□□□ -0.31
MARK3-201ENST00000216288 SERPINA10Q9UK55 444 aa13.12□□□□□ -0.31
MARK3-201ENST00000216288 L3MBTL1Q9Y468 752 aa13.12□□□□□ -0.31
MARK3-201ENST00000216288 SYNGAP1Q96PV0 1343 aa13.11□□□□□ -0.31
MARK3-201ENST00000216288 DHX15O43143 795 aaKnown RBP13.11□□□□□ -0.31
MARK3-201ENST00000216288 RTN2O75298 545 aa13.11□□□□□ -0.31
MARK3-201ENST00000216288 CD58P19256 250 aa13.11□□□□□ -0.31
MARK3-201ENST00000216288 ACOT2P49753 483 aa13.11□□□□□ -0.31
MARK3-201ENST00000216288 CALCOCO2Q13137 446 aa13.11□□□□□ -0.31
MARK3-201ENST00000216288 DLGAP5Q15398 846 aa13.11□□□□□ -0.31
MARK3-201ENST00000216288 CCDC197Q8NCU1 140 aa13.11□□□□□ -0.31
MARK3-201ENST00000216288 ZNF317Q96PQ6 595 aaPredicted RBP13.11□□□□□ -0.31
MARK3-201ENST00000216288 MTRF1LQ9UGC7 380 aaKnown RBP13.11□□□□□ -0.31
MARK3-201ENST00000216288 AGAP1Q9UPQ3 857 aa13.11□□□□□ -0.31
MARK3-201ENST00000216288 CCNE2O96020 404 aa13.11□□□□□ -0.31
MARK3-201ENST00000216288 QARSP47897 775 aaKnown RBP13.11□□□□□ -0.31
MARK3-201ENST00000216288 MPP2Q14168 576 aa13.11□□□□□ -0.31
MARK3-201ENST00000216288 SLC15A2Q16348 729 aa13.11□□□□□ -0.31
MARK3-201ENST00000216288 TKFCQ3LXA3 575 aa13.11□□□□□ -0.31
MARK3-201ENST00000216288 NUGGCQ68CJ6 796 aa13.11□□□□□ -0.31
MARK3-201ENST00000216288 FAM47EQ6ZV65 393 aa13.11□□□□□ -0.31
MARK3-201ENST00000216288 ANKS1BQ7Z6G8 1248 aa13.11□□□□□ -0.31
MARK3-201ENST00000216288 CHURC1Q8WUH1 139 aa13.11□□□□□ -0.31
MARK3-201ENST00000216288 CCT6BQ92526 530 aa13.11□□□□□ -0.31
MARK3-201ENST00000216288 ARHGEF2Q92974 986 aaKnown RBP13.11□□□□□ -0.31
MARK3-201ENST00000216288 LBHD1Q9BQE6 289 aaPredicted RBP13.11□□□□□ -0.31
MARK3-201ENST00000216288 ZNF70Q9UC06 446 aaPredicted RBP13.11□□□□□ -0.31
MARK3-201ENST00000216288 ODF2LQ9ULJ1 636 aa13.11□□□□□ -0.31
MARK3-201ENST00000216288 STK38LQ9Y2H1 464 aa13.11□□□□□ -0.31
MARK3-201ENST00000216288 TMEM120BA0PK00 339 aa13.1□□□□□ -0.31
MARK3-201ENST00000216288 A8MUI8 341 aa13.1□□□□□ -0.31
MARK3-201ENST00000216288 RASSF9O75901 435 aa13.1□□□□□ -0.31
MARK3-201ENST00000216288 ECEL1O95672 775 aa13.1□□□□□ -0.31
MARK3-201ENST00000216288 P4HBP07237 508 aaKnown RBP13.1□□□□□ -0.31
MARK3-201ENST00000216288 ZSCAN5DPP0CG00 497 aa13.1□□□□□ -0.31
MARK3-201ENST00000216288 PLS3P13797 630 aa13.1□□□□□ -0.31
MARK3-201ENST00000216288 TCF4P15884 667 aa13.1□□□□□ -0.31
MARK3-201ENST00000216288 MAPK4P31152 587 aa13.1□□□□□ -0.31
MARK3-201ENST00000216288 CHRNA3P32297 505 aa13.1□□□□□ -0.31
MARK3-201ENST00000216288 RDXP35241 583 aaKnown RBP13.1□□□□□ -0.31
MARK3-201ENST00000216288 ADCY8P40145 1251 aa13.1□□□□□ -0.31
MARK3-201ENST00000216288 RPS6P62753 249 aaKnown RBP13.1□□□□□ -0.31
MARK3-201ENST00000216288 ZNF394Q53GI3 561 aa13.1□□□□□ -0.31
MARK3-201ENST00000216288 SV2AQ7L0J3 742 aa13.1□□□□□ -0.31
MARK3-201ENST00000216288 PARP9Q8IXQ6 854 aa13.1□□□□□ -0.31
MARK3-201ENST00000216288 PRCCQ92733 491 aaPredicted RBP13.1□□□□□ -0.31
MARK3-201ENST00000216288 ZNF668Q96K58 619 aaPredicted RBP13.1□□□□□ -0.31
MARK3-201ENST00000216288 C11orf70Q9BRQ4 267 aa13.1□□□□□ -0.31
MARK3-201ENST00000216288 AAASQ9NRG9 546 aa13.1□□□□□ -0.31
MARK3-201ENST00000216288 PNMA3Q9UL41 463 aa13.1□□□□□ -0.31
MARK3-201ENST00000216288 HNRNPDLO14979 420 aaKnown RBP13.1□□□□□ -0.31
MARK3-201ENST00000216288 CETPP11597 493 aa13.1□□□□□ -0.31
MARK3-201ENST00000216288 KRT10P13645 584 aa13.1□□□□□ -0.31
MARK3-201ENST00000216288 PDE6CP51160 858 aa13.1□□□□□ -0.31
MARK3-201ENST00000216288 ITGA8P53708 1063 aa13.1□□□□□ -0.31
MARK3-201ENST00000216288 SMTNP53814 917 aa13.1□□□□□ -0.31
MARK3-201ENST00000216288 KCNJ2P63252 427 aa13.1□□□□□ -0.31
MARK3-201ENST00000216288 IRX3P78415 501 aaPredicted RBP13.1□□□□□ -0.31
MARK3-201ENST00000216288 SIX1Q15475 284 aaPredicted RBP13.1□□□□□ -0.31
MARK3-201ENST00000216288 SRRM1Q8IYB3 904 aaKnown RBP13.1□□□□□ -0.31
MARK3-201ENST00000216288 GLIS1Q8NBF1 620 aa13.1□□□□□ -0.31
MARK3-201ENST00000216288 SEL1LQ9UBV2 794 aa13.1□□□□□ -0.31
MARK3-201ENST00000216288 PCDHA3Q9Y5H8 950 aa13.1□□□□□ -0.31
MARK3-201ENST00000216288 ASTN2O75129 1339 aaPredicted RBP13.1□□□□□ -0.31
MARK3-201ENST00000216288 ADGRA3Q8IWK6 1321 aa13.1□□□□□ -0.31
MARK3-201ENST00000216288 SIPA1L1O43166 1804 aa13.09□□□□□ -0.31
MARK3-201ENST00000216288 GSTTP1A0A1W2PQM5 241 aa13.09□□□□□ -0.31
MARK3-201ENST00000216288 FAM187AA6NFU0 413 aa13.09□□□□□ -0.31
MARK3-201ENST00000216288 SPDYE2BA6NHP3 402 aa13.09□□□□□ -0.31
MARK3-201ENST00000216288 TP73O15350 636 aa13.09□□□□□ -0.31
MARK3-201ENST00000216288 SPAG7O75391 227 aa13.09□□□□□ -0.31
MARK3-201ENST00000216288 EGFRP00533 1210 aa13.09□□□□□ -0.31
MARK3-201ENST00000216288 SPDYE6P0CI01 402 aa13.09□□□□□ -0.31
MARK3-201ENST00000216288 ETS1P14921 441 aa13.09□□□□□ -0.31
MARK3-201ENST00000216288 HOXA7P31268 230 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms